| Allan, M., Ourselin, S., Thompson, S., Hawkes, D. J., Kelly, J., Stoyanov, D. (2013). Toward detection and localization of instruments in minimally invasive surgery. IEEE Trans Biomed Eng 60(4), 1050-1058 doi:10.1109/TBME.2012.2229278. Author URL |
| Campanella, M., Molinari, E., Baraldi, P., Nocetti, L., Porro, C. A., Alexander, D. C. (2013). An algorithm to estimate anatomical connectivity between brain regions using diffusion MRI. Magnetic Resonance Imaging 31(3), 353-358 |
| Campbell-Washburn, A. E., Atkinson, D., Josephs, O., Lythgoe, M. F., Ordidge, R. J., Thomas, D. L. (2013). Correction of RF spike noise in MR images using Robust Principal Component Analysis. ISMRM. ( pp.3780-). |
| Cardoso, M. J., Melbourne, A., Kendall, G. S., Modat, M., Robertson, N. J., Marlow, N., Ourselin, S. (2013). AdaPT: An adaptive preterm segmentation algorithm for neonatal brain MRI. Neuroimage 65, 97-108 doi:10.1016/j.neuroimage.2012.08.009. Author URL |
| Chan, R. W., Kozerke, S., Giese, D., Harmer, J., Stoeck, C. T., von Deuster, C., Aitken, A., Atkinson, D. (2013). Characterization and correction of eddy-current artifacts in unipolar and bipolar diffusion sequences using a field-monitoring approach: Application to renal diffusion tensor imaging (DTI). ISMRM. ( pp.2576-). |
| Dikaios, N., Alazeez, M. A., Emberton, M., Fujiwara, T., Atkinson, D., Punwani, S. (2013). Derivation and comparison of site specific peripheral and transition zone quantitative DCE MRI logistic regression models for prostate cancer detection: does cancer location matter? [Accepted] |
| Dikaios, N., Hamy, V., Punwani, S., Atkinson, D. (2013). Noise estimation for averaged DW MR images. ISMRM. ( pp.2080-). |
| Drobnjak, I., Cruz, G., Alexander, D. C. (2013). Optimising oscillating waveform-shape for pore size sensitivity in diffusion-weighted MR. Microporous and Mesoporous Materials |
| Ducros, N., Bassi, A., Valentini, G., Canti, G., Arridge, S., D'Andrea, C. (2013). Fluorescence molecular tomography of an animal model using structured light rotating view acquisition. JOURNAL OF BIOMEDICAL OPTICS 18(2), ARTN 020503 doi:10.1117/1.JBO.18.2.020503. Author URL |
| Griffin, L. D., Wahab, M. H., Newell, A. J. (2013). Distributional Learning of Appearance. PLoS ONE 8(2), e58074- doi:10.1371/journal.pone.0058074. Author URL |
| Hamy, V., Punwani, S., Makanyanga, J., Taylor, S., Atkinson, D. (2013). Motion correction in small bowel DCE-MRI using Robust Data Decomposition Registration. ISMRM. ( pp.2705-). |
| Harmer, J., Stoeck, C. T., Chan, R. W., Toussaint, N., von Deuster, C., Atkinson, D., Kozerke, S. (2013). in-vivo high resolution Diffusion Tensor Imaging of the human heart at 3T: Fat suppression in the presence ofB0 field inhomogeneities. ISMRM 2013. ( pp.3206-). |
| Harmer, J., Toussaint, N., Pushparajah, K., Stoeck, C. T., Chan, R. W., Razavi, R., Atkinson, D., Kozerke, S. (2013). in-vivo Diffusion Tensor Imaging of the systemic right ventricle at 3T. ISMRM 2013. ( pp.3098-). |
| Hutton, B. F., Thomas, B. A., Erlandsson, K., Bousse, A., Reilhac-Laborde, A., Kazantsev, D., Pedemonte, S., Vunckx, K., Arridge, S. R., Ourselin, S. (2013). What approach to brain partial volume correction is best for PET/MRI? NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT 702, 29-33 doi:10.1016/j.nima.2012.07.059. Author URL |
| Keihaninejad, S., Zhang, H., Ryan, N. S., Malone, I. B., Modat, M., Cardoso, J., Cash, D., Fox, N. C., Ourselin, S. (2013). An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease. NeuroImage doi:10.1016/j.neuroimage.2013.01.044. Author URL |
| Leung, K. K., Bartlett, J. W., Barnes, J., Manning, E. N., Ourselin, S., Fox, N. C., Alzheimer's Disease Neuroimaging Initiative, (2013). Cerebral atrophy in mild cognitive impairment and Alzheimer disease Rates and acceleration. Neurology 80(7), 648-654 doi:10.1212/WNL.0b013e318281ccd3. Author URL |
| Mahoney, C. J., Malone, I. B., Ridgway, G. R., Buckley, A. H., Downey, L. E., Golden, H. L., Ryan, N. S., Ourselin, S., Schott, J. M., Rossor, M. N., Fox, N. C., Warren, J. D. (2013). White matter tract signatures of the progressive aphasias. Neurobiol Aging 34(6), 1687-1699 doi:10.1016/j.neurobiolaging.2012.12.002. Author URL |
| Malone, I. B., Cash, D., Ridgway, G. R., MacManus, D. G., Ourselin, S., Fox, N. C., Schott, J. M. (2013). MIRIAD-Public release of a multiple time point Alzheimer's MR imaging dataset. Neuroimage 70, 33-36 doi:10.1016/j.neuroimage.2012.12.044. Author URL |
| Martin, J., McClelland, J., Yip, C., Thomas, C., Hartill, C., Ahmad, S., O'Brien, R., Meir, I., Landau, D., Hawkes, D. (2013). Building motion models of lung tumours from cone-beam CT for radiotherapy applications. Phys Med Biol 58(6), 1809-1822 doi:10.1088/0031-9155/58/6/1809. Author URL |
| McClelland, J. R., Hawkes, D. J., Schaeffter, T., King, A. P. (2013). Respiratory motion models: A review. Med Image Anal 17(1), 19-42 doi:10.1016/j.media.2012.09.005. Author URL |
| Menys, A., Taylor, S. A., Emmanuel, A., Ahmed, A., Plumb, A., Odille, F., Alam, A., Halligan, S., Atkinson, D. (2013). A novel technique for global small bowel motility assessment using dynamic MRI. ISMRM. ( pp.0677-). |
| Norris, F. C., Modat, M., Cleary, J. O., Price, A. N., McCue, K., Scambler, P. J., Ourselin, S., Lythgoe, M. F. (2013). Segmentation propagation using a 3D embryo atlas for high-throughput MRI phenotyping: Comparison and validation with manual segmentation. Magn Reson Med 69(3), 877-883 doi:10.1002/mrm.24306. Author URL |
| Panagiotaki, E., Alexander, D. C., Bourne, R. M. (2013). Comparison of single and multi-compartment models of diffusion in fixed prostate tissue. Proceedings of the 21st meeting of the International society for magnetic resonance in medicine 2013. [Accepted] |
| Panagiotaki, E., Walker-Samuel, S., Siow, B., Johnson, P., Pedley, R., Lythgow, M. F., Alexander, D. C. (2013). In vivo characterisation of colorectal tumour microstructure with DW-MRI. Proceedings of the 21st meeting of the International society for magnetic resonance in medicine 2013. [Accepted] |
| Ryan, N. S., Keihaninejad, S., Shakespeare, T. J., Lehmann, M., Crutch, S. J., Malone, I. B., Thornton, J. S., Mancini, L., Hyare, H., Yousry, T., Ridgway, G. R., Zhang, H., Modat, M., Alexander, D. C., Rossor, M. N., Ourselin, S., Fox, N. C. (2013). Magnetic resonance imaging evidence for presymptomatic change in thalamus and caudate in familial Alzheimer's disease. Brain 136(Pt 5), 1399-1414 doi:10.1093/brain/awt065. Author URL |
| Thompson, S., Penney, G., Billia, M., Challacombe, B., Hawkes, D., Dasgupta, P. (2013). Design and evaluation of an image-guidance system for robot-assisted radical prostatectomy. BJU Int doi:10.1111/j.1464-410X.2012.11692.x. Author URL |
| Tremoulheac, B., Atkinson, D., Arridge, S. (2013). Fast dynamic MRI via nuclear norm minimization and accelerated proximal gradient. International Symposium on Biomedical Imaging: From Nano to Macro. [Accepted] |
| Winston, G. P., Symms, M. R., Alexander, D. C., Duncan, J. S., Zhang, H. (2013). Clinical utility of NODDI in assessing patients with epilepsy due to focal cortical dysplasia. International Society for Magnetic Resonance in Medicine (ISMRM) 21st Scientific Meeting and Exhibition. Author URL Publisher URL |
| Xi, J., Lamata, P., Niederer, S., Land, S., Shi, W., Zhuang, X., Ourselin, S., Duckett, S. G., Shetty, A. K., Rinaldi, C. A., Rueckert, D., Razavi, R., Smith, N. P. (2013). The estimation of patient-specific cardiac diastolic functions from clinical measurements. Med Image Anal 17(2), 133-146 doi:10.1016/j.media.2012.08.001. Author URL |
| Yang, G., Hipwell, J. H., Hawkes, D. J., Arridge, S. R. (2013). Numerical Methods for Coupled Reconstruction and Registration in Digital Breast Tomosynthesis. The Annals of the BMVA Publisher URL [Submitted] |
| von Deuster, C., Stoeck, C. T., Giese, D., Harmer, J., Chan, R. W., Atkinson, D., Kozerke, S. (2013). Concurrent dual-slice cardiac DTI of the in-vivo human heart. ISMRM 2013. ( pp.2099-). |
| Alexander, D. C., Dyrby, T. B. (2012). Compensation for bias from unwanted gradient contributions in STEAM diffusion MRI. International Society for Magnetic Resonance in Medicine. ( Vol. 20 pp.1884-1884). ISMRM. |
| Allain, B., Hu, M., Lovat, L. B., Cook, R. J., Vercauteren, T., Ourselin, S., Hawkes, D. J. (2012). Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty. Med Image Anal 16(2), 482-496 doi:10.1016/j.media.2011.11.005. Author URL |
| Alner, K., Hyare, H., Mead, S., Rudge, P., Wroe, S., Rohrer, J. D., Ridgway, G. R., Ourselin, S., Clarkson, M., Hunt, H., Fox, N. C., Webb, T., Collinge, J., Cipolotti, L. (2012). Distinct neuropsychological profiles correspond to distribution of cortical thinning in inherited prion disease caused by insertional mutation. J Neurol Neurosurg Psychiatry 83(1), 109-114 doi:10.1136/jnnp-2011-300167. Author URL |
| Arridge, S. R., Betcke, T., Schweiger, M., Smigaj, W. (2012). BEM++. |
| Arridge, S. R., Betcke, T., Smigaj, W., Schweiger, M. J. (2012). BEM++. Author URL Publisher URL |
| Arridge, S. R., Scherzer, O. (2012). Imaging from coupled physics FOREWORD. INVERSE PROBLEMS 28(8), ARTN 080201 doi:10.1088/0266-5611/28/8/080201. Author URL |
| Arridge, S., Moskow, S., Schotland, J. C. (2012). Inverse Born series for the Calderon problem. INVERSE PROBLEMS 28(3), ARTN 035003 doi:10.1088/0266-5611/28/3/035003. Author URL |
| Bakshi, B., Sutcliffe, A., Akindolie, M., Vadamalayan, B., John, S., Arkley, C., Griffin, L. D., Baker, A. (2012). How reliably can paediatric professionals identify pale stool from cholestatic newborns? Archives of Disease in Childhood - Fetal and Neonatal Edition 97(5), F385 -F387-F385 -F387 doi:10.1136/fetalneonatal-2010-209700. Author URL |
| Bousse, A., Pedemonte, S., Thomas, B. A., Erlandsson, K., Ourselin, S., Arridge, S., Hutton, B. F. (2012). Markov random field and Gaussian mixture for segmented MRI-based partial volume correction in PET. Phys Med Biol 57(20), 6681-6705 doi:10.1088/0031-9155/57/20/6681. Author URL |
| Campanella, M., Molinari, E., Baraldi, P., Nocetti, L., Porro, C. A., Alexander, D. C. (2012). An algorithm to estimate anatomical connectivity between brain regions using diffusion MRI. Magnetic Resonance Imaging |
| Cardoso, M. J., Winston, G., Modat, M., Keihaninejad, S., Duncan, J., Ourselin, S. (2012). Geodesic shape-based averaging. Med Image Comput Comput Assist Interv. ( Vol. 15 pp.26-33). Author URL |
| Cardoso, M. J., Wolz, R., Modat, M., Fox, N. C., Rueckert, D., Ourselin, S. (2012). Geodesic information flows. Med Image Comput Comput Assist Interv. ( Vol. 15 pp.262-270). Author URL |
| Cash, D. M., Melbourne, A., Modat, M., Machado, M., Clarkson, M., Fox, N., Ourselin, S. (2012). Cortical folding analysis on patients with Alzheimer's disease and mild cognitive impairment. Lecture Notes in Computer Science. ( Vol. 7512 pp.289-296). Berlin/Heidelberg: Springer. Publisher URL |
| Cheng, M., Marinovic, W., Watson, M., Ourselin, S., Passenger, J., De Visser, H., Salvado, O., Riek, S. (2012). Abdominal Palpation Haptic Device for Colonoscopy Simulation Using Pneumatic Control. IEEE TRANSACTIONS ON HAPTICS 5(2), 97-108 doi:10.1109/ToH.2011.66. Author URL |
| Cox, B., Laufer, J. G., Arridge, S. R., Beard, P. C. (2012). Quantitative spectroscopic photoacoustic imaging: a review. J Biomed Opt 17(6), 061202- doi:10.1117/1.JBO.17.6.061202. Author URL |
| Dikaios, N., Fujiwara, T., Abd Alazeez, M., Atkinson, D., Punwani, S. (2012). Diagnostic modelling of multi-parametric MRI as a radiological tool to predict transition zone prostate cancer. ISMRM 2012. ( pp.547-). |
| Dikaios, N., Fujiwara, T., Atkinson, D., Punwani, S. (2012). Artificial neural networks in radiological predictive models. ISMRM 2012. ( pp.2560-). |
| Dikaios, N., Punwani, S., Hamy, V., Purpura, P., Fitzke, H., Rice, S., Taylor, S., Atkinson, D. (2012). Maximum likelihood ADC parameter estimates improve selection of metastatic cervical nodes for patients with head and neck squamous cell cancer. ISMRM 2012. ( pp.3579-). |
| Ducros, N., Bassi, A., D'Andrea, C., Valentini, G., Schweiger, M., Arridge, S. R. (2012). Virtual source patterns for fluorescence tomography. ISBI. ( pp.82-85). IEEE. Publisher URL |
| Ducros, N., D'Andrea, C., Bassi, A., Valentini, G., Arridge, S. (2012). A virtual source pattern method for fluorescence tomography with structured light. PHYSICS IN MEDICINE AND BIOLOGY 57(12), 3811-3832 doi:10.1088/0031-9155/57/12/3811. Author URL |
| Dyrby, T. B., Søgaard, L. V., Hall, M. G., Ptito, M., Alexander, D. C. (2012). Contrast and stability of the axon diameter index from microstructure imaging with diffusion MRI. Magnetic Resonance in Medicine |
| Ferizi, U., Panagiotaki, E., Schneider, T., Wheeler-Kingshott, C. A. M., Alexander, D. C. (2012). White Matter Models of In Vivo Diffusion MRIHuman Brain Data: A Statistical Ranking. Proceeding of the 16th Conference on Medical Image Understanding and Analysis. Publisher URL |
| Figini, M., Alexander, D. C., Fasano, F., Farina, L., Baselli, G., Tagliavini, F., Bizzi, A. (2012). Mathematical models of diffusion in prion disease. Italian chapter of the international society for magnetic resonance in medicine. |
| Fonteijn, H. M., Modat, M., Clarkson, M. J., Barnes, J., Lehmann, M., Hobbs, N. Z., Scahill, R. I., Tabrizi, S. J., Ourselin, S., Fox, N. C., Alexander, D. C. (2012). An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease. Neuroimage 60(3), 1880-1889 doi:10.1016/j.neuroimage.2012.01.062. Author URL |
| Griffin, L. D., Elangovan, P., Mundell, A., Hezel, D. C. (2012). Improved segmentation of meteorite micro-CT images using local histograms. COMPUTERS & GEOSCIENCES 39, 129-134 doi:10.1016/j.cageo.2011.07.002. Author URL |
| Hamy, V., Melbourne, A., Tremoulheac, B., Punwani, S., Atkinson, D. (2012). Registration of DCE-MRI using robust data decomposition. ISMRM 2012. ( pp.749-). |
| Hamy, V., Walker-Samuel, S., Atkinson, D., Punwani, S. (2012). Apparent diffusion coefficient estimation in prostate DW-MRI using maximum likelihood. ISMRM 2012. ( pp.1854-). |
| Han, L., Hipwell, J. H., Tanner, C., Taylor, Z., Mertzanidou, T., Cardoso, J., Ourselin, S., Hawkes, D. J. (2012). Development of patient-specific biomechanical models for predicting large breast deformation. Phys Med Biol 57(2), 455-472 doi:10.1088/0031-9155/57/2/455. Author URL |
| Hawkes, D. J., Mertzanidou, T., Hipwell, J., Atkinson, D., Roth, H., Hampshire, T. (2012). Establishing spatial correspondence for the analysis of images from highly deforming anatomy. 34th Annual International IEEE EMBS Conference of the IEEE Engineering in Medicine and Biology Society. ( Vol. 2012 pp.3732-3735). |
| Hoang Duc, A. K., Modat, M., Leung, K. K., Barnes, J., Fox, N. C., Kadir, T., Ourselin, S. (2012). Manifold learning for atlas selection in multi-atlas based segmentation of hippocampus. SPIE. ( pp.8314-8334). |
| Hu, M., Penney, G., Figl, M., Edwards, P., Bello, F., Casula, R., Rueckert, D., Hawkes, D. (2012). Reconstruction of a 3D surface from video that is robust to missing data and outliers: Application to minimally invasive surgery using stereo and mono endoscopes. Med Image Anal 16(3), 597-611 doi:10.1016/j.media.2010.11.002. Author URL |
| Hu, Y., Ahmed, H. U., Carter, T., Arumainayagam, N., Lecornet, E., Barzell, W., Freeman, A., Nevoux, P., Hawkes, D. J., Villers, A., Emberton, M., Barratt, D. C. (2012). A biopsy simulation study to assess the accuracy of several transrectal ultrasonography (TRUS)-biopsy strategies compared with template prostate mapping biopsies in patients who have undergone radical prostatectomy. BJU Int 110(6), 812-820 doi:10.1111/j.1464-410X.2012.10933.x. Author URL |
| Hu, Y., Ahmed, H. U., Taylor, Z., Allen, C., Emberton, M., Hawkes, D., Barratt, D. (2012). MR to ultrasound registration for image-guided prostate interventions. Med Image Anal 16(3), 687-703 doi:10.1016/j.media.2010.11.003. Author URL |
| Ianus, A., Siow, B., Drobnjak, I., Zhang, H., Alexander, D. C. (2012). Gaussian Phase Distribution Approximations of the Square WaveOscillating Gradient Spin-Echo (SWOGSE) Diffusion Signal. International society for magnetic resonance in medicine. |
| Ianus, A., Siow, B., Drobnjak, I., Zhang, H., Alexander, D. C. (2012). Gaussian phase distribution approximations for oscillating gradient spin echo diffusion MRI. Journal of Magnetic Resonance doi:10.1016/j.jmr.2012.11.021. Author URL |
| Kazantsev, D., Arridge, S. R., Pedemonte, S., Bousse, A., Erlandsson, K., Hutton, B. F., Ourselin, S. (2012). An anatomically driven anisotropic diffusion filtering method for 3D SPECT reconstruction. Phys Med Biol 57(12), 3793-3810 doi:10.1088/0031-9155/57/12/3793. Author URL |
| Keihaninejad, S., Ryan, N., Malone, I. B., Modat, M., Cash, D. M., Ridgway, G., Zhang, H., Fox, N., Ourselin, S. (2012). The importance of group-wise registration in tract based spatial statistics study of neurodegeneration: a simulation study in Alzheimer's disease. PLoS One 7(11), e45996 doi:10.1371/journal.pone.0045996. |
| Kleinnijenhuis, M., Barth, M., Alexander, D. C., van Cappellen van Walsum, A. -. M., Norris, D. G. (2012). Structure Tensor Informed Fiber Tractography (STIFT) by combining gradient echo MRI and diffusion weighted imaging. NeuroImage 59(4), 3941-3954 |
| Kowalik, G. T., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Continuous assessment of cardiac output during exercise using real time flow with fast GPU reconstruction. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.232-). |
| Kowalik, G. T., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Real time flow with fast GPU reconstruction for continuous assessment of cardiac output. 15th Annual SCMR. ( Vol. 14 pp.W63-). |
| Kowalik, G. T., Steeden, J. A., Pandya, B., Odille, F., Atkinson, D., Taylor, A., Muthurangu, V. (2012). Real-time flow with fast GPU reconstruction for continuous assessment of cardiac output. Journal of Magnetic Resonance Imaging 36(6), 1477-1482 doi:10.1002/jmri.23736. |
| Kowalik, G., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A., Muthurangu, V. (2012). Real time flow with fast GPU reconstruction for continuous assessment of cardiac output. ISMRM 2012. ( pp.1178-). |
| Kwok, P. P., Ciccarelli, O., Chard, D. T., Miller, D. H., Alexander, D. C. (2012). Predicting clinically definite multiple sclerosis from onset using SVM. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 7263 LNAI, 116-123 |
| Lecornet, E., Ahmed, H. U., Hu, Y., Moore, C. M., Nevoux, P., Barratt, D., Hawkes, D., Villers, A., Emberton, M. (2012). The accuracy of different biopsy strategies for the detection of clinically important prostate cancer: A computer simulation. J Urol 188(3), 974-980 doi:10.1016/j.juro.2012.04.104. Author URL |
| Leung, K. K., Ridgway, G. R., Ourselin, S., Fox, N. C., Alzheimer's Disease Neuroimaging Initiative, (2012). Consistent multi-time-point brain atrophy estimation from the boundary shift integral. Neuroimage 59(4), 3995-4005 doi:10.1016/j.neuroimage.2011.10.068. Author URL |
| Macdonald, K. E., Bartlett, J. W., Leung, K. K., Ourselin, S., Barnes, J. (2012). The Value of Hippocampal and Temporal Horn Volumes and Rates of Change in Predicting Future Conversion to AD. Alzheimer Dis Assoc Disord |
| Mallik, C., Bandula, S., Rice, S., Atkinson, D., Taylor, S., Moon, J., Punwani, S. (2012). Optimisation of the bolus and infusion protocol for equilibrium magnetic resonance imaging. ISMRM 2012. ( pp.4085-). |
| McClelland, J., Suh, Y., Ahmad, S., Hawkes, D. (2012). Study of Deformable Registration Based 4DCT Ventilation Imaging Methods. MEDICAL PHYSICS. ( Vol. 39 pp.4018-4018). Author URL |
| Melbourne, A., Cahill, N., Tanner, C., Modat, M., Hawkes, D. J., Ourselin, S. (2012). Using fractional gradient information in non-rigid image registration: Application to breast MRI. Progress in Biomedical Optics and Imaging - Proceedings of SPIE 8314 |
| Melbourne, A., Kendall, G. S., Cardoso, M. J., Gunney, R., Robertson, N. J., Marlow, N., Ourselin, S. (2012). Radial structure in the preterm cortex; persistence of the preterm phenotype at term equivalent age? Med Image Comput Comput Assist Interv. ( Vol. 15 pp.256-263). Author URL |
| Menys, A., Atkinson, D., Odille, F., Ahmed, A., Novelli, M., Rodriguez-Justo, M., Punwani, S., Halligan, S., Taylor, S. (2012). Quantified terminal ileal motility during MR enterography as a potential biomarker of Crohn's disease activity: a preliminary study. European Radiology 22(11), 2494-2501 doi:10.1007/s00330-012-2514-2. |
| Menys, A., Atkinson, D., Punwani, S., Proctor, I., Novelli, M., Rodriguez-Justo, M., Hawkes, D. J., Halligan, S., Taylor, S. (2012). MRI-derived small bowel motility as a marker of disease activity in Crohn’s disease using a histopathological standard of reference. ECR. ( pp.B-0054-). |
| Menys, A., Helbren, E., Makanyanga, J., Halligan, S., Atkinson, D., Taylor, S. (2012). Small bowel strictures in Crohn’s Disease: A quantitative investigation of intestinal motility using MR Enterography. ISMRM 2012. ( pp.407-). |
| Menys, A., Odille, F., Punwani, S., Novelli, M., Rodriguez-Justo, M., Halligan, S., Atkinson, D., Taylor, S. (2012). MRI derived small bowel motility as a marker of Crohn’s disease activity. ISMRM 2012. ( pp.1274-). |
| Mertzanidou, T., Hipwell, J. H., Han, L., Taylor, Z. A., Huisman, H. J., Bick, U., Karssemeijer, N., Hawkes, D. J. (2012). Intensity-based MRI to X-ray mammography registration with an integrated fast biomechanical transformation. Digital Mammography / IWDM. ( Vol. 7361 pp.48-55). Springer. Publisher URL |
| Mertzanidou, T., Hipwell, J., Cardoso, M. J., Zhang, X., Tanner, C., Ourselin, S., Bick, U., Huisman, H., Karssemeijer, N., Hawkes, D. (2012). MRI to X-ray mammography registration using a volume-preserving affine transformation. Med Image Anal 16(5), 966-975 doi:10.1016/j.media.2012.03.001. Author URL |
| Modat, M., Cardoso, M. J., Daga, P., Cash, D. M., Fox, N. C., Ourselin, S. (2012). Inverse-consistent symmetric free form deformation. WBIR. ( Vol. 7359 pp.79-88). Springer. Publisher URL |
| Morgan, G. L., Zhang, H., Whitcher, B., Alexander, D. C. (2012). A Bayesian framework for modelling the regional variation of white matter microstructure. Medical Image Understanding and Analysis. Publisher URL |
| Muhlert, N., Sethi, V., Schneider, T., Daga, P., Cipolotti, L., Haroon, H. A., Parker, G. J., Ourselin, S., Wheeler-Kingshott, C. A., Miller, D. H., Ron, M. A., Chard, D. T. (2012). Diffusion MRI-based cortical complexity alterations associated with executive function in multiple sclerosis. J Magn Reson Imaging doi:10.1002/jmri.23970. Author URL |
| Newell, A. J., MORGAN, R., Bull, P. A., Griffin, L. D., Graham, G. (2012). Automated texture recognition of quartz sand grains for forensic analysis for forensic applications. Journal of Forensic Sciences [Accepted] |
| Newell, A. J., Morgan, R. M., Griffin, L. D., Bull, P. A., Marshall, J. R., Graham, G. (2012). Automated Texture Recognition of Quartz Sand Grains for Forensic Applications. J Forensic Sci 57(5), 1285-1289 doi:10.1111/j.1556-4029.2012.02126.x. Author URL |
| Odille, F., Menys, A., Ahmed, A., Punwani, S., Taylor, S., Atkinson, D. (2012). Quantitative assessment of small bowel motility by nonrigid registration of dynamic MR images. Magnetic Resonance in Medicine 68(3), 783-793 doi:10.1002/mrm.23298. |
| Panagiotaki, E., Schneider, T., Siow, B., Hall, M. G., Lythgoe, M. F., Alexander, D. C. (2012). Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison. NeuroImage 59(3), 2241-2254 |
| Pedemonte, S., Cardoso, M. J., Arridge, S. R., Hutton, B. F., Ourselin, S. (2012). Steady-state model of the radio-pharmaceutical uptake for MR-PET. MICCAI (1). ( Vol. 7510 pp.289-297). Springer. Publisher URL |
| Perez-Juste Abascal, J. F., Aguirre, J., Chamorro-Servent, J., Schweiger, M., Arridge, S., Ripoll, J., Vaquero, J. J., Desco, M. (2012). Influence of absorption and scattering on the quantification of fluorescence diffuse optical tomography using normalized data. JOURNAL OF BIOMEDICAL OPTICS 17(3), ARTN 036013 doi:10.1117/1.JBO.17.3.036013. Author URL |
| Protonotarios, E., Griffin, L. (2012). An objective measure of order for 2-D patterns of points in agreement with human perception. PERCEPTION 41(10), 1274-1274 Author URL |
| Proverbio, A., Siow, B., Lythgoe, M., Gibson, A., Alexander, D. (2012). Multimodality investigation of microstructure: the combination of diffusion NMR and diffuse optical spectroscopy. Medical Image Understanding and Analysis 2012. ( Vol. Proceedings of th 16th Conference on Medical Image pp.87-92). Swansea: BMVA. |
| Punwani, S., Purpura, P., Dikaios, N., Fitzke, H., Bainbridge, A., Price, D., Rice, S., Morley, S., Beale, T., Mendes, R., Forster, M., Carnell, D., Vaitilingam, T., Newton, N., Atkinson, D., Halligan, S., Taylor, S. (2012). Multi-scale analysis of apparent diffusion coefficient (ADC) predicts cervical nodal status in patients with head & neck squamous cell carcinoma. ISMRM 2012. ( pp.1052-). |
| Richardson, S., Siow, B., Batchelor, A. M., Lythgoe, M. F., Alexander, D. C. (2012). A viable isolated tissue system: A tool for detailed MR measurements and controlled perturbation in physiologically stable tissue. Magn Reson.Med. doi:10.1002/mrm.24410. |
| Rohrer, J. D., Clarkson, M. J., Kittus, R., Rossor, M. N., Ourselin, S., Warren, J. D., Fox, N. C. (2012). Rates of hemispheric and lobar atrophy in the language variants of frontotemporal lobar degeneration. J Alzheimers Dis 30(2), 407-411 doi:10.3233/JAD-2012-111556. Author URL |
| Roth, H., Boone, D., Halligan, S., Hampshire, T., McClelland, J., Hu, M., Punwani, S., Taylor, S., Hawkes, D. (2012). External clinical validation of prone and supine CT colonography registration. 7601, 10-19 Berlin / Heidelberg, Germany: doi:10.1007/978-3-642-33612-6_2. Publisher URL |
| Roth, H., McClelland, J., Modat, M., Hampshire, T., Boone, D., Hu, M., Ourselin, S., Halligan, S., Hawkes, D. (2012). Inverse-Consistent Symmetric Registration of Inner Colon Surfaces Derived From Prone and Supine CT Colonography. MEDICAL PHYSICS. ( Vol. 39 pp.3959-3960). Author URL |
| Rowe, M. C., Zhang, H., Alexander, D. C. (2012). Utilising measures of fiber dispersion in white matter tractography. MICCAI 2012 Workshop for Computational Diffusion MRI. Publisher URL |
| Schneider, T., Wheeler-Kingshott, C. A. M., Alexander, D. C. (2012). Mapping the axon diameter index in the corpus callosum is clinically feasible. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2012): 20th Annual Meeting and Exhibition. |
| Shepherd, T., Prince, S. J. D., Alexander, D. (2012). Interactive lesion segmentation with shape priors from offline and online learning. IEEE Trans. Medical Imaging doi:10.1109/TMI.2012.2196285. [Accepted] |
| Shi, W., Zhuang, X., Wang, H., Duckett, S., Luong, D. V., Tobon-Gomez, C., Tung, K., Edwards, P. J., Rhode, K. S., Razavi, R. S., Ourselin, S., Rueckert, D. (2012). A Comprehensive Cardiac Motion Estimation Framework Using Both Untagged and 3-D Tagged MR Images Based on Nonrigid Registration. IEEE Trans Med Imaging 31(6), 1263-1275 doi:10.1109/TMI.2012.2188104. Author URL |
| Siow, B. M. C. W., Drobnjak, I., Ianus, A., Christie, I. N., Alexander, D. A. (2012). Pore Size Estimation with Oscillating Gradient Spin Echo (OGSE) Diffusion NMR. 11th International Bologna Conference on Magnetic Resonance in Porous Media. |
| Siow, B. M. C. W., Ianus, A., Drobnjak, I., Christie, I. N., Lythgoe, M. F., Alexander, D. C. (2012). Optimised oscillating gradient diffusion MRI for the estimation of axon radius in an ex vivo rat brain. 20th Annual Meeting of The International Society for Magnetic Resonance in Medicine. ( Vol. Vol. 20 (Abstract 0357) ). |
| Siow, B., Drobnjak, I., Chatterjee, A., Lythgoe, M. F., Alexander, D. C. (2012). Estimation of pore size in a microstructure phantom using the optimised gradient waveform diffusion weighted NMR sequence. Journal of Magnetic Resonance 214, 51-60 |
| Soloviev, V. Y., Zacharakis, G., Spiliopoulos, G., Favicchio, R., Correia, T., Arridge, S. R., Ripoll, J. (2012). Tomographic imaging with polarized light. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION 29(6), 980-988 Author URL |
| Steeden, J. A., Atkinson, D., Jones, A., Muthurangu, V. (2012). High resolution slice-selective Fourier Velocity Encoding using spiral SENSE with velocity unwrap. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.O40-). |
| Steeden, J. A., Atkinson, D., Jones, A., Muthurangu, V. (2012). Velocity unwrap for high resolution slice-selective Fourier Velocity Encoding using spiral SENSE. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.W25-). |
| Steeden, J. A., Jones, A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Velocity unwrap for high resolution slice-selective Fourier velocity encoding using spiral SENSE. ISMRM 2012. ( pp.672-). |
| Steeden, J. A., Jones, A., Pandya, B., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). High-resolution slice-selective Fourier velocity encoding in congenital heart disease using spiral SENSE with velocity unwrap. Magnetic Resonance in Medicine 67(6), 1538-1546 doi:10.1002/mrm.24293. |
| Tariq, M., schneider, T., Alexander, D. C., Wheeler-Kingshot, C., Zhang, H. (2012). Scan-rescan reproducibility of neurite microstructure estimates using NODDI. Medical Image Understanding and Analysis. ( pp.255-261). Publisher URL |
| Tarvainen, T. M., Cox, B. T., Kaipio, J. P., Arridge, S. R. (2012). Reconstructing absorption and scattering distributions in quantitative photoacoustic tomography. Inverse Problems 28(8), 084009 doi:10.1088/0266-5611/28/8/084009. |
| Thompson, S., Penney, G., Challacombe, B., Hawkes, D., Dasgupta, P. (2012). EVALUATION OF IMAGE GUIDANCE SYSTEMS FOR ROBOT ASSISTED RADICAL PROSTATECTOMY. JOURNAL OF ENDOUROLOGY 26, A407-A407 Author URL |
| Tremoulheac, B., Atkinson, D., Arridge, S. R. (2012). Motion and contrast enhancement separation model reconstruction from partial measurements in dynamic MRI. MICCAI Workshop on Sparsity Techniques in Medical Imaging. |
| Usman, M., Kolbitsch, C., Vaillant, G., Atkinson, D., Schaeffter, T., Batchelor, P. G., Prieto, C. (2012). A frame work for non-rigid motion corrected compressed sensing for highly accelerated MRI. ISMRM 2012. ( pp.72-). |
| Vonach, M., Marson, B., Yun, M., Cardoso, J., Modat, M., Ourselin, S., Holder, D. (2012). A method for rapid production of subject specific finite element meshes for electrical impedance tomography of the human head. Physiol Meas 33(5), 801-816 doi:10.1088/0967-3334/33/5/801. Author URL |
| Wheeler-Kingshott, C. A. M., Ciccarelli, O., Schneider, T., Alexander, D. C., Cercignani, M. (2012). A new approach to structural integrity assessment based on axial and radial diffusivities. Functional Neurology 27(2), 85-90 |
| Yang, G. (2012). Editor of: Numerical Approaches for Solving the Combined Reconstruction and Registration of Digital Breast Tomosynthesis. [Unpublished] |
| Yang, G., Hipwell, J. H., Hawkes, D. J., Arridge, S. R. (2012). A Nonlinear Least Squares Method for Solving the Joint Reconstruction and Registration Problem in Digital Breast Tomosynthesis. Proceedings of Medical Image Understanding and Analysis 2012. ( pp.87-92). Swansea, UK: Department of Computer Science, Swansea University. Publisher URL |
| Yang, G., Hipwell, J. H., Tanner, C., Hawkes, D. J., Arridge, S. R. (2012). Joint registration and limited-angle reconstruction of digital breast tomosynthesis. Breast Imaging: 11th International Workshop, IWDM 2012, Philadelphia, PA, USA, July 8-11, 2012: Proceedings. ( Vol. 7361 pp.713-720). Berlin / Heidelberg, Germany: Springer-Verlag. Publisher URL |
| Young, J., Modat, M., Cardoso, M. J., Ashburner, J., Ourselin, S. (2012). Classification of Alzheimer's disease patients and controls with Gaussian processes. ISBI. ( pp.1523-1526). IEEE. Publisher URL |
| Young, J., Ridgway, G. R., Leung, K. K., Ourselin, S. (2012). Classification of Alzheimer's disease patients with hippocampal shape, wrapper based feature selection and support vector machine. SPIE. ( pp.8314-8325). |
| Zhang, H., Dyrby, T. B., Alexander, D. C. (2012). Axon diameter mapping in crossing fibers with diffusion MRI. Proceedings of the international society for magnetic resonance in medicine. ( Vol. 20 ). |
| Zhang, H., Schneider, T., Wheeler-Kingshott, C. A., Alexander, D. C. (2012). NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain. NeuroImage 61(4), 1000-1016 |
| Zhang, H., Schneider, T., Wheeler-Kingshott, C. A., Alexander, D. C. (2012). NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain. Neuroimage 61(5), 1000-1016 doi:10.1016/j.neuroimage.2012.03.072. |
| Zhang, H., Schneider, T., Wheeler-Kingshott, C., Alexander, D. C. (2012). NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain. Proceedings of the international society for magnetic resonance in medicine. ( Vol. 20 ). |
| Zhang, H., Schneider, T., wheeler-kingshott, C., Alexander, D. C. (2012). NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain. Proceedings for the Organization of Human Brain Mapping. Publisher URL |
| Abascal, J. F. P. -. J., Chamorro-Servent, J., Aguirre, J., Arridge, S., Correia, T., Ripoll, J., Vaquero, J. J., Desco, M. (2011). Fluorescence diffuse optical tomography using the split Bregman method. MEDICAL PHYSICS 38(11), 6275-6284 doi:10.1118/1.3656063. Author URL |
| Abascal, J. F. P. J., Lionheart, W. R. B., Arridge, S. R., Schweiger, M., ATKINSON, D., Holder, D. S. (2011). Electrical impedance tomography in anisotropic media with known eigenvectors. Inverse Problems 27(6), 065004- doi:10.1088/0266-5611/27/6/065004. Publisher URL |
| Ahmed, H. U., Hu, Y., Carter, T., Lecornet, E., Freeman, A., Hawkes, D. J., BARRATT, D. C., Emberton, M. (2011). Characterizing Clinically Significant Prostate Cancer Using Template Prostate Mapping Biopsy. Journal of Urology 186(2), 458-464 [Accepted] |
| Allain, B., Hu, M., Lovat, L. B., Cook, R. J., Vercautran, T., Ourselin, S., Hawkes, D. J. (2011). Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty. Medical Image Analysis [Accepted] |
| Arridge, S. R. (2011). Methods in diffuse optical imaging. PHILOS T R SOC A 369(1955), 4558-4576 doi:10.1098/rsta.2011.0311. |
| Cardoso, M. J., Clarkson, M. J., Modat, M., Ourselin, S. (2011). Longitudinal cortical thickness estimation using Khalimsky's cubic complex. Med Image Comput Comput Assist Interv. ( Vol. 14 pp.467-475). Author URL |
| Cardoso, M. J., Clarkson, M. J., Modat, M., Ourselin, S. (2011). NiftySeg. http://sourceforge.net/projects/niftyseg/. |
| Cardoso, M. J., Clarkson, M. J., Modat, M., Ourselin, S. (2011). On the extraction of topologically correct thickness measurements using Khalimsky's cubic complex. Lecture Notes in Computer Science. ( Vol. 6801 LNCS pp.159-170). |
| Cardoso, M. J., Clarkson, M. J., Modat, M., Talbot, H., Couprie, M., Ourselin, S. (2011). Topologically Correct Cortical Segmentation using Khalimsky's Cubic Complex framework. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. ( Vol. 7962 ). |
| Cardoso, M. J., Clarkson, M. J., Ridgway, G. R., Modat, M., Fox, N. C., Ourselin, S., Alzheimer's Disease Neuroimaging Initiative, (2011). LoAd: A locally adaptive cortical segmentation algorithm. Neuroimage 56(3), 1386-1397 doi:10.1016/j.neuroimage.2011.02.013. Author URL |
| Cardoso, M. J., Melbourne, A., Kendall, G. S., Modat, M., Hagmann, C. F., Robertson, N. J., Marlow, N., Ourselin, S. (2011). Adaptive neonate brain segmentation. Med Image Comput Comput Assist Interv. ( Vol. 14 pp.378-386). Author URL |
| Clarkson, M. J., Cardoso, M. J., Modat, M., Ridgway, G. R., Leung, K. K., Rohrer, J. D., Ourselin, S., Fox, N. (2011). A Comparative Study of Voxel and Surface Based Cortical Thickness Methods in Frontotemporal Dementia. Alzheimer's Association International Conference (AAIC) Alzheimer's Imaging Consortium. Author URL |
| Clarkson, M. J., Cardoso, M. J., Ridgway, G. R., Modat, M., Leung, K. K., Rohrer, J. D., Fox, N. C., Ourselin, S. (2011). A comparison of voxel and surface based cortical thickness estimation methods. NeuroImage 57(3), 856-865 doi:10.1016/j.neuroimage.2011.05.053. Publisher URL |
| Clarkson, M. J., Cardoso, M., Modat, M., Ridgway, G. R., Leung, K. K., Rohrer, J., Fox, N. C., Ourselin, S. (2011). Cross-sectional analysis using voxel or surface based cortical thickness methods: A comparison study. 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro: Proceedings: March 30 – April 2, 2011 Chicago, Illinois, USA. ( pp.381-384). Piscataway, US: IEEE. Publisher URL |
| Cleary, J. O., Modat, M., Norris, F. C., Price, A. N., Jayakody, S. A., Martinez-Barbera, J. P., Greene, N. D., Hawkes, D. J., Ordidge, R. J., Scambler, P. J., Ourselin, S., Lythgoe, M. F. (2011). Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. Neuroimage 54(2), 769-778 doi:10.1016/j.neuroimage.2010.07.039. Author URL |
| Correia, T., Aguirre, J., Sisniega, A., Chamorro-Servent, J., Abascal, J., Vaquero, J. J., Desco, M., Kolehmainen, V., Arridge, S. (2011). Split operator method for fluorescence diffuse optical tomography using anisotropic diffusion regularisation with prior anatomical information. BIOMEDICAL OPTICS EXPRESS 2(9), 2632-2648 Author URL |
| Cox, B., Tarvainen, T., Arridge, S. (2011). Multiple Illumination Quantitative Photoacoustic Tomography using Transport and Diffusion Models. TOMOGRAPHY AND INVERSE TRANSPORT THEORY. ( Vol. 559 pp.1-12). Author URL |
| Daga, P., Winston, G., Modat, M., Cardoso, M. J., Stretton, J., Symms, M., McEvoy, A. W., Hawkes, D., Duncan, J., Ourselin, S. (2011). Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on. ( pp.353-356). Publisher URL |
| Daga, P., Winston, G., Modat, M., Cardoso, M. J., White, M., Mancini, L., McEvoy, A. W., Thornton, J., Micallef, C., Yousry, T., Hawkes, D., Duncan, J. S., Ourselin, S. (2011). Improved neuronavigation through integration of intraoperative anatomical and diffusion images in an interventional MRI suite. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 6689 LNCS, 168-178 |
| Daga, P., Winston, G., Modat, M., White, M., Mancini, L., Cardoso, M., Symms, M., Hawkes, D., Duncan, J., Ourselin, S. (2011). Accurate localization of optic radiation during neurosurgery in an interventional MRI suite. IEEE Trans Med Imaging doi:10.1109/TMI.2011.2179668. |
| Deligianni, F., Robinson, E., Sharp, D., Edwards, A. D., Rueckert, D., Alexander, D. C. (2011). Exploiting hierarchy in structural brain networks. Proceedings - International Symposium on Biomedical Imaging , 871-874 |
| Drobnjak, I., Alexander, D. C. (2011). Optimising time-varying gradient orientation for microstructure sensitivity in diffusion-weighted MR. J Magn Reson 212(2), 344-354 doi:10.1016/j.jmr.2011.07.017. Author URL |
| Drobnjak, I., Zhang, H., Hall, M. G., Alexander, D. C. (2011). The matrix formalism for generalised gradients with time-varying orientation in diffusion NMR. J Magn Reson 210(1), 151-157 doi:10.1016/j.jmr.2011.02.022. Author URL |
| Ducros, N., Bassi, A., Valentini, G., Schweiger, M., Arridge, S., D'Andrea, C. (2011). Multiple-view fluorescence optical tomography reconstruction using compression of experimental data. OPT LETT 36(8), 1377-1379 |
| Dyrby, T. B., Baaré, W. F., Alexander, D. C., Jelsing, J., Garde, E., Søgaard, L. V. (2011). An Ex Vivo Imaging Pipeline for Producing High-Quality and High-Resolution Diffusion-Weighted Imaging Datasets. Hum Brain Mapp 32(4), 544-563 doi:10.1002/hbm.21043. Author URL |
| Elisee, J., Bonnet, M., Arridge, S. (2011). Accelerated boundary element method for diffuse optical imaging. OPTICS LETTERS 36(20), 4101-4103 Author URL |
| Elisee, J., Gibson, A., Arridge, S. (2011). Diffuse optical cortical mapping using the boundary element method. BIOMEDICAL OPTICS EXPRESS 2(3), 568-578 Author URL |
| Fonteijn, H. M., Clarkson, M. J., Modat, M., Barnes, J., Lehmann, M., Ourselin, S., Fox, N. C., Alexander, D. C. (2011). An event-based disease progression model and its application to familial Alzheimer's disease. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). ( Vol. 6801 LNCS pp.748-759). |
| Fonteijn, H., Clarkson, M., Modat, M., Barnes, J., Lehmann, M., Ourselin, S., Fox, N., Alexander, D. (2011). An event-based disease progression model and its application to familial Alzheimer's disease. ( Vol. 6801 pp.748-759-748-759). Springer Berlin / Heidelberg. Publisher URL |
| Griffin, L., Wahab, M. (2011). Similar things look similar. PERCEPTION 40(1), 110-111 |
| Hampshire, T., Roth, H., Hu, M., Boone, D., Slabaugh, G., Punwani, S., Halligan, S., Hawkes, D. (2011). Automatic prone to supine haustral fold matching in CT colonography using a Markov random field model. Med Image Comput Comput Assist Interv 14(Pt 1), 508-515 Author URL |
| Hamy, V., Atkinson, D., Walker-Samuel, S., Punwani, S. (2011). Comparison of least squares and maximum likelihood for apparent diffusion coefficient estimation in prostate diffusion-weighted MRI (DW-MRI). RSNA 2011. ( pp.LL-INE1160-TUA-). |
| Hamy, V., Walker-Samuel, S., Punwani, S., Atkinson, D. (2011). Comparison of least squares and maximum likelihood for apparent diffusion coefficient estimation in prostate DW-MRI. MIUA 2011. ( Vol. Poster 2-35 ). |
| Hu, Y., Carter, T. J., Ahmed, H. U., Emberton, M., Allen, C., Hawkes, D. J., Barratt, D. C. (2011). Modelling Prostate Motion for Data Fusion During Image-Guided Interventions. IEEE Trans Med Imaging 30(11), 1887-1900 doi:10.1109/TMI.2011.2158235. Author URL |
| Johnsen, S. F., Clark, C., Atkinson, D. (2011). Registration of low-SNR high-resolution diffusion-weighted images. MIUA 2011. ( Vol. Poster 1-40 ). |
| Kazantsev, D., Bousse, A., Pedemonte, S., Arridge, S. R., Hutton, B. F., Ourselin, S. (2011). Edge preserving bowsher prior with nonlocal weighting for 3D spect reconstruction. Proceedings - International Symposium on Biomedical Imaging , 1158-1161 |
| Kolehmainen, V., Tarvainen, T., Arridge, S. R., Kaipio, J. P. (2011). Marginalization of uninteresting parameters in inverse problems – application to diffuse opticaltomography. International Journal for Uncertainty Quantification 1(1), 1-17 |
| Kowalik, G., Steeden, J. A., ATKINSON, D., Muthurangu, V. (2011). A networked GPU reconstructor within the clinical workflow for rapid fat quantification. ISMRM 2011. ( pp.2708-). |
| Kunz, N., Zhang, H., O'brien, K. R., Assaf, Y., Alexander, D. C., Lazeyras, F., Hüppi1, P. S. (2011). Probing microstructural information using the CHARMED model in the non-myelinated human newborn brain at 3T. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2011): 19th Annual Meeting and Exhibition. ( Vol. 19 pp.2489-2489). Berkeley, US: ISMRM. Publisher URL |
| Lecornet, E., Ahmed, H. U., Hu, Y., Moore, C. M., Nevoux, P., Barratt, D., Hawkes, D., Villers, A., Emberton, M. (2011). PERFORMANCE CHARACTERISTICS OF DIFFERENT TRANSRECTAL (TRB) AND TRANSPERINEAL MAPPING PROSTATE BIOPSY (TPB) STRATEGIES: A SIMULATION ON 96 CYSTOPROSTATECTOMY SPECIMENS (CPTS). EUR UROL SUPPL 10(2), 177-178 |
| Lehmann, M., Rohrer, J. D., Clarkson, M. J., Ridgway, G. R., Scahill, R. I., Modat, M., Warren, J. D., Ourselin, S., Barnes, J., Rossor, M. N., Fox, N. C. (2011). Patterns of cortical thickness in pathologically-confirmed typical and atypical Alzheimer's disease. ( Vol. 2 pp.57-67). |
| Leung, K. K., Barnes, J., Modat, M., Ridgway, G. R., Bartlett, J. W., Fox, N. C., Ourselin, S., Alzheimer's Disease Neuroimaging Initiative, (2011). Brain MAPS: An automated, accurate and robust brain extraction technique using a template library. Neuroimage 55(3), 1091-1108 doi:10.1016/j.neuroimage.2010.12.067. Author URL |
| Leung, K. K., Barnes, J., Modat, M., Ridgway, G. R., Bartlett, J., Fox, N. C., Ourselin, S. (2011). Automated brain extraction using Multi-Atlas Propagation and Segmentation (MAPS). The eighth IEEE International Symposium on Biomedical Imaging (ISBI 2011). Publisher URL |
| Leung, K. K., Ridgway, G. R., Clarkson, M. J., Nielsen, C., Ourselin, S., Fox, N. (2011). Automated and consistent brain atrophy estimation using boundary shift integral in longitudinal MRI study. Alzheimer's Association International Conference (AAIC): Alzheimer's Imaging Consortium. Author URL |
| Leung, K. K., Ridgway, G. R., Ourselin, S., Fox, N. C. (2011). Consistent multi-time-point brain atrophy estimation from the boundary shift integral. NeuroImage (0) doi:10.1016/j.neuroimage.2011.10.068. Author URL |
| Leung, K. K., Ridgway, G. R., Ourselin, S., Fox, N. C. (2011). Consistent multi-time-point brain atrophy estimation from the boundary shift integral. Neuroimage [Accepted] |
| MORGAN, G. L., Zhang, H., Whitcher, B., Alexander, D. C. (2011). A framework for modelling the regional variation of white matter microstructure. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2011): 19th Annual Meeting and Exhibition. ( Vol. 19 pp.1929-1929). Berkeley, US: ISMRM. Publisher URL |
| MORGAN, G., Zhang, H., Whitcher, B., Alexander, D. C. (2011). Regional variation models of white matter microstructure. Proceedings of the organization for human brain mapping. ( Vol. 17 ). |
| Martelli, F., Del Bianco, S., Zaccanti, G., Liemert, A., Kienle, A., Schweiger, M., Arridge, S. R., Prepara, S., Jelzow, A., Wabnitz, H., Zolek, N., Liebert, A. (2011). Comparison of independent forward solvers for photon migration through layered media. OPTICAL TOMOGRAPHY AND SPECTROSCOPY OF TISSUE IX. ( Vol. 7896 ). Author URL |
| McClelland, J. R., Hughes, S., Modat, M., Qureshi, A., Ahmad, S., Landau, D. B., Ourselin, S., Hawkes, D. J. (2011). Inter-fraction variations in respiratory motion models. Phys Med Biol 56(1), 251-272 doi:10.1088/0031-9155/56/1/015. Author URL |
| McGinty, J., Stuckey, D. W., Soloviev, V. Y., Laine, R., Wylezinska-Arridge, M., Wells, D. J., Arridge, S. R., French, P. M. W., Hajnal, J. V., Sardini, A. (2011). In vivo fluorescence lifetime tomography of a FRET probe expressed in mouse. BIOMEDICAL OPTICS EXPRESS 2(7), 1907-1917 Author URL |
| Melbourne, A., Cahill, N. D., Tanner, C., Hawkes, D. J., IEEE, (2011). IMAGE REGISTRATION USING AN EXTENDABLE QUADRATIC REGULARISER. 2011 8TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO. ( pp.557-560). Author URL |
| Melbourne, A., Hipwell, J., Modat, M., Mertzanidou, T., Huisman, H., Ourselin, S., Hawkes, D. J. (2011). The effect of motion correction on pharmacokinetic parameter estimation in dynamic-contrast-enhanced MRI. Phys Med Biol 56(24), 7693-7708 doi:10.1088/0031-9155/56/24/001. Author URL |
| Melbourne, A., Hipwell, J., Modat, M., Mertzanidou, T., Huisman, H., Ourselin, S., Hawkes, D. J. (2011). The effect of motion correction on pharmacokinetic parameter estimation in dynamic-contrast-enhanced MRI. Physics in Medicine and Biology 56(24), 7693-7708 |
| Menys, A., Ahmed, A., Punwani, S., Odille, F., Steward, M., ATKINSON, D., Hawkes, D. J., Halligan, S., Taylor, S. A. (2011). Quantified small bowel motility during MR enterography in Crohn’s disease as a marker of inflammatory activity. ESGAR 2011. |
| Menys, A., Ahmed, A., Punwani, S., Odille, F., Steward, M., ATKINSON, D., Hawkes, D. J., Halligan, S., Taylor, S. A. (2011). Quantified small bowel motility during MR enterography in Crohn’s disease as a marker of inflammatory activity. UKRC. |
| Modat, M., Ridgway, G. R., Daga, P., Cardoso, M. J., Hawkes, D. J., Ashburner, J., Ourselin, S. (2011). Log-Euclidean free-form deformation. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. ( Vol. 7962 ). |
| Mohan, P. S., Soloviev, V. Y., Arridge, S. R. (2011). Discontinuous Galerkin method for the forward modelling in optical diffusion tomography. INT J NUMER METH ENG 85(5), 562-574 doi:10.1002/nme.2974. |
| Mohan, P. S., Tarvainen, T., Schweiger, M., Pulkkinen, A., Arridge, S. R. (2011). Variable order spherical harmonic expansion scheme for the radiative transport equation using finite elements. J COMPUT PHYS 230(19), 7364-7383 doi:10.1016/j.jcp.2011.06.004. |
| Morgan, G. L., Zhang, H,, Whitcher, B,, Alexander, DC, (2011). A Bayesian framework for modelling the regional variation of white matter microstructure. Medical Image Understanding and Analysis. Publisher URL |
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| Norris, F. C., Cleary, J. O., Modat, M., Sinclair, B., Mccue, K., Wells, J. A., Martinez-Barbera, J. P., Brander, S., Fisher, E., Scambler, P. J., Ourselin, S., Lythgoe, M. F. (2011). Mouse phenotyping using high resolution 3D microscopic magnetic resonance imaging. GENETICS RESEARCH. ( Vol. 93 pp.440-440). Author URL |
| Odille, F., Menys, A., Ahmed, A., Punwani, S., Taylor, S., ATKINSON, D. (2011). Quantitative assessment of small bowel motility by nonrigid registration of dynamic MR images. ISMRM 2011. ( pp.3022-). |
| Odille, F., Steeden, J. A., Muthurangu, V., Atkinson, D. (2011). Automatic Segmentation Propagation of the Aorta in Real-Time Phase Contrast MRI Using Nonrigid Registration. J Magn Reson Imaging 33(1), 232-238 doi:10.1002/jmri.22402. Author URL |
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| Pinto Pereira, S. M., McCormack, V. A., Hipwell, J. H., Record, C., Wilkinson, L. S., Moss, S. M., Hawkes, D. J., dos-Santos-Silva, I. (2011). Localized Fibroglandular Tissue as a Predictor of Future Tumor Location within the Breast. Cancer Epidemiol Biomarkers Prev 20(8), 1718-1725 doi:10.1158/1055-9965.EPI-11-0423. Author URL |
| Ridgway, G. R., Lehmann, M., Rohrer, J., Clarkson, M., Warren, J., Ourselin, S., Fox, N. (2011). Balanced sensitivity and specificity on unbalanced data using support vector machine re-thresholding. Paris, France. Author URL |
| Rijkhorst, E. J., Rivens, I., Haar, G. T., Hawkes, D., Barratt, D. (2011). Effects of Respiratory Liver Motion on Heating for Gated and Model-Based Motion-Compensated High-Intensity Focused Ultrasound Ablation. Med Image Comput Comput Assist Interv 14(Pt 1), 605-612 Author URL |
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| Roth, H. R., McClelland, J. R., Boone, D. J., Modat, M., Cardoso, M. J., Hampshire, T. E., Hu, M., Punwani, S., Ourselin, S., Slabaugh, G. G., Halligan, S., Hawkes, D. J. (2011). Registration of the endoluminal surfaces of the colon derived from prone and supine CT colonography. Medical Physics 38(6), 3077-3089 doi:10.1118/1.3577603. Publisher URL |
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| SIOW, B., Drobnjak, I., Lythgoe, M. F., Alexander, D. C. (2011). Optimised Gradient Waveform Spin-Echo sequence for Diffusion Weighted MR in a Microstructure Phantom. 19th meeting of the International Society for Magnetic Resonance in Medicine. |
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| Shi, W., Zhuang, X., Wang, H., Duckett, S. G., Oregan, D., Edwards, P. J., Ourselin, S., Rueckert, D. (2011). Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation. FIMH. ( Vol. 6666 pp.163-170). Springer. Publisher URL |
| Shi, W., Zhuang, X., Wolz, R., Duckett, S. G., Tung, K. -. P., Wang, H., Ourselin, S., Edwards, P. J., Razavi, R., Rueckert, D. (2011). A Multi-image Graph Cut Approach for Cardiac Image Segmentation and Uncertainty Estimation. STACOM. ( Vol. 7085 pp.178-187). Springer. Publisher URL |
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| Taylor, Z. A., Crozier, S., Ourselin, S. (2011). A Reduced Order Explicit Dynamic Finite Element Algorithm for Surgical Simulation. IEEE Trans Med Imaging 30(9), 1713-1721 doi:10.1109/TMI.2011.2143723. |
| Thomas, B. A., Erlandsson, K., Modat, M., Thurfjell, L., Vandenberghe, R., Ourselin, S., Hutton, B. F. (2011). The importance of appropriate partial volume correction for PET quantification in Alzheimer's disease. Eur J Nucl Med Mol Imaging 38(6), 1104-1119 doi:10.1007/s00259-011-1745-9. |
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| Thomas, B. A., Erlandsson, K., Thurfjell, L., Vandenberghe, R., Ourselin, S., Hutton, B. F. (2011). White matter variability for two amyloid brain PET tracers: implications for partial volume correction. EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING. ( Vol. 38 pp.S108-S108). Author URL |
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| Wang, H., Shi, W., Zhuang, X., Duckett, S. G., Tung, K. -. P., Edwards, P. J., Razavi, R., Ourselin, S., Rueckert, D. (2011). Automatic Cardiac Motion Tracking Using Both Untagged and 3D Tagged MR Images. STACOM. ( Vol. 7085 pp.45-54). Springer. Publisher URL |
| Winston, G. P., Daga, P., Stretton, J., Modat, M., Symms, M. R., McEvoy, A. W., Ourselin, S., Duncan, J. S. (2011). Developing optic radiation tractography to reduce visual field deficits following anterior temporal lobe resection. JOURNAL OF NEUROLOGY. ( Vol. 258 pp.54-54). SPRINGER HEIDELBERG. |
| Winston, G. P., Daga, P., Stretton, J., Modat, M., Symms, M. R., McEvoy, A. W., Ourselin, S., Duncan, J. S. (2011). Optic radiation tractography and vision in anterior temporal lobe resection. Annals of Neurology doi:10.1002/ana.22619. [Accepted] |
| Yang, G., Hipwell, J. H., Hawkes, D. J., Arridge, S. R. (2011). Unconstrained Simultaneous Scheme to Fully Couple Reconstruction and Registration for Digital Breast Tomosynthesis: A Feasible Study. Proceedings of the Workshop on Breast Image Analysis: In conjunction with the 14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2011). ( pp.25-32). Copenhagen, Denmark: Department of Computer Science (DIKU), University of Copenhagen. Publisher URL |
| Yang, G., Hipwell, J. H., Tanner, C., Hawkes, D. J., Arridge, S. R. (2011). Alternating Reconstruction and Registration for Digital Breast Tomosynthesis. Proceedings of the UK Radiological Congress 2011: 6-8 June 2011, Manchester UK. ( pp.62-63). London, UK: The British Institute of Radiology. Publisher URL |
| ZHANG, H., Barazany, D., Assaf, Y., Lundell, H. M., Alexander, D. C., Dyrby, T. (2011). A comparative study of axon diameter imaging techniques using diffusion MRI. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2011): 19th Annual Meeting and Exhibition. ( Vol. 19 pp.83-83). Berkeley, US: ISMRM. |
| ZHANG, H., Dyrby, T. B., Alexander, D. C. (2011). Axon diameter mapping in crossing fibers with diffusion MRI. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011 doi:10.1007/978-3-642-23629-7_11. |
| ZHANG, H., Hubbard, P. L., Parker, G. J. M., Alexander, D. C. (2011). Axon diameter mapping in the presence of orientation dispersion using diffusion MRI. Proceedings of the organization for human brain mapping. |
| Zhang, D. P., Zhuang, X. H., Ourselin, S., Rueckert, D. (2011). Motion tracking of left ventricle and coronaries in 4D CTA. MEDICAL IMAGING 2011: IMAGE PROCESSING. ( Vol. 7962 ). SPIE-INT SOC OPTICAL ENGINEERING. |
| Zhang, H., Hubbard, P. L., Parker, G. J. M., Alexander, D. C. (2011). Axon diameter mapping in the presence of orientation dispersion with diffusion MRI. NeuroImage 56(3), 1301-1315 doi:10.1016/j.neuroimage.2011.01.084. |
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| Zhuang, X., Shi, W., Duckett, S. G., Wang, H., Razavi, R., Hawkes, D. J., Rueckert, D., Ourselin, S. (2011). A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions. FIMH. ( Vol. 6666 pp.367-374). Springer. Publisher URL |
| Alexander, D. C., Hubbard, P. L., Hall, M. G., Moore, E. A., Ptito, M., Parker, G. J., Dyrby, T. B. (2010). Orientationally invariant indices of axon diameter and density from diffusion MRI. Neuroimage 52(4), 1374-1389 doi:10.1016/j.neuroimage.2010.05.043. Author URL |
| Alexander, D. C., Seunarine, K. K. (2010). Mathematics of Crossing Fibres. In Jones, D. K. (Ed.). Diffusion MRI ( ). Oxford University Press, USA. |
| Allain, B., Hu, M., Lovat, L. B., Cook, R. J., Vercauteren, T., Ourselin, S., Hawkes, D. J. (2010). A System for Biopsy Site Re-targeting with Uncertainty in Gastroenterology and Oropharyngeal Examinations. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.514-521). Author URL |
| Archer, H. A., Kennedy, J., Barnes, J., Pepple, T., Boyes, R., Randlesome, K., Clegg, S., Leung, K. K., Ourselin, S., Frost, C., Rossor, M. N., Fox, N. C. (2010). Memory complaints and increased rates of brain atrophy: risk factors for mild cognitive impairment and Alzheimer's disease. International Journal of Geriatric Psychiatry 25(11), 1119-1126 doi:10.1002/gps.2440. Author URL |
| Barnes, J., Ridgway, G. R., Bartlett, J., Henley, S. M., Lehmann, M., Hobbs, N., Clarkson, M. J., MacManus, D. G., Ourselin, S., Fox, N. C. (2010). Head size, age and gender adjustment in MRI studies: a necessary nuisance? Neuroimage 53(4), 1244-1255 doi:10.1016/j.neuroimage.2010.06.025. |
| Bourgeat, P., Chételat, G., Villemagne, V. L., Fripp, J., Raniga,, P,, Pike,, K,, Acosta,, O,, Szoeke,, C,, Ourselin,, S,, Ames,, D,, Ellis,, KA,, Martins,, RN,, Masters,, CL,, Rowe,, CC, S., O, (2010). beta-Amyloid burden in the temporal neocortex is related to hippocampal atrophy in elderly subjects without dementia. Neurology 74(2), 121-127 Author URL |
| Bousse, A., Erlandsson, K., Pedemonte, S., Kazantsev, D., Ourselin, S., Arridge, S., Hutton, B. F. (2010). Weighted MRI-Based bowsher priors for SPECT brain image reconstruction. IEEE Nuclear Science Symposium Conference Record , 3519-3522 |
| Bousse, A., Fuin, N., Erlandsson, K., Pedemonte, S., Kazantsev, D., Ourselin, S., Arridge, S., Hutton, B. F. (2010). Point spread function optimization in SPECT. IEEE Nuclear Science Symposium Conference Record , 2061-2065 |
| Cardoso, M. J., Clarkson, M. J., Modat, M., Ridgway, G. R., Ourselin, S. (2010). LOCALLY WEIGHTED MARKOV RANDOM FIELDS FOR CORTICAL SEGMENTATION. Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on. ( pp.956-959). Publisher URL |
| Chen, B., Siow, B., Carmichael, D., Odille, F., Ordidge, R., Todd-Pokropek, A. (2010). Characterization of trabecular orientation in chicken femur by multi-directional SPENT (Sub-Pixel Enhancement of Non-Uniform Tissue). ISMRM. ( pp.793-). |
| Clarkson, M. J., Malone, I. B., Modat, M., Leung, K. K., Ryan, N., Alexander, D. C., Fox, N. C., Ourselin, S. (2010). A Framework for Using Diffusion Weighted Imaging to Improve Cortical Parcellation. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.534-541). Author URL |
| Crosier, M., Griffin, L. D. (2010). Using Basic Image Features for Texture Classification. INT J COMPUT VISION 88(3), 447-460 doi:10.1007/s11263-009-0315-0. |
| D'Andrea, C., Ducros, N., Bassi, A., Arridge, S., Valentini, G. (2010). Fast 3D optical reconstruction in turbid media using spatially modulated light. BIOMEDICAL OPTICS EXPRESS 1(2), 471-481 Author URL |
| Dowling, J., Lambert, J., Parker, J., Greer, P. B., Fripp, J., Denham, J., Ourselin, S., Salvado, O. (2010). Automatic MRI Atlas-Based External Beam Radiation Therapy Treatment Planning for Prostate Cancer. Prostate Cancer Imaging. ( Vol. 6367 pp.25-33). Springer. Publisher URL |
| Drobnjak, I., Siow, B., Alexander, D. (2010). Optimizing gradient waveforms for microstructure sensitivity in diffusion-weighted MR. Journal of Magnetic Resonance Publisher URL |
| Ducros, N., D'andrea, C., Valentini, G., Rudge, T., Arridge, S., Bassi, A. (2010). Full-wavelet approach for fluorescence diffuse optical tomography with structured illumination. OPTICS LETTERS 35(21), 3676-3678 Author URL |
| Dyrby, T. B., Hubbard, P. L., Ptito, M., Hall, M. G., Alexander, D. C. (2010). Dependence of Axon Diameter Index on Maximum Gradient Strength. International Society for Magnetic Resonance in Medicine. ( pp.576-576). ISMRM. |
| Elisee, J. P., Gibson, A., Arridge, S. (2010). Combination of boundary element method and finite element method in diffuse optical tomography. IEEE Transactions on Biomedical Engineering 57(11), 2737-2745 |
| Fripp, J., Crozier, S., Warfield, S. K., Ourselin, S. (2010). Automatic Segmentation and Quantitative Analysis of the Articular Cartilages From Magnetic Resonance Images of the Knee. IEEE Trans Med Imaging 29(1), 55-64 doi:10.1109/TMI.2009.2024743. |
| Griffin, L. D., Lillholm, M. (2010). Symmetry Sensitivities of Derivative-of-Gaussian Filters. IEEE T PATTERN ANAL 32(6), 1072-1083 doi:10.1109/TPAMI.2009.91. |
| Guitera, P., Bourgeat, P., Stretch, J. R., Scolyer, R. A., Ourselin, S., Lean, C., Thompson, J. F., Bourne, R. (2010). Diagnostic value of 8.5 T magnetic resonance spectroscopy of benign and malignant skin lesion biopsies. Melanoma Res 20(4), 311-317 |
| Han, L., Hipwell, J. H., Taylor, Z. A., Tanner, C., Ourselin, S., Hawkes, D. J. (2010). Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method. Digital Mammography / IWDM. ( Vol. 6136 pp.728-735). Springer. Publisher URL |
| Hu, M., Penney, G., Rueckert, D., Edwards, P., Bello, F., Figl, M., Casula, R., Cen, Y., Liu, J., Miao, Z., Hawkes, D. (2010). A Robust Mosaicing Method with Super-Resolution for Optical Medical Images. MEDICAL IMAGING AND AUGMENTED REALITY. ( Vol. 6326 pp.373-382). Author URL |
| Hu, Y., Rijkhorst, E. -. J., Manber, R., Hawkes, D. J., Barratt, D. C. (2010). Deformable Vessel-Based Registration Using Landmark-Guided Coherent Point Drift. MIAR. ( Vol. 6326 pp.60-69). Springer. Publisher URL |
| Hu, Y., van den Boom, R., Carter, T., Taylor, Z., Hawkes, D., Ahmed, H. U., Emberton, M., Allen, C., Barratt, D. (2010). A comparison of the accuracy of statistical models of prostate motion trained using data from biomechanical simulations. Prog Biophys Mol Biol 103(2-3), 262-272 doi:10.1016/j.pbiomolbio.2010.09.009. Author URL |
| Jafar, Y. M., Hipwell, J. H., Tanner, C., Hawkes, D. J. (2010). Detection of Stable Mammographic Features under Compression using Simulated Mammograms. MEDICAL IMAGING 2010: IMAGE PROCESSING. ( Vol. 7623 ). SPIE-INT SOC OPTICAL ENGINEERING. |
| Kazantsev, D., Pedemonte, S., Bousse, A., Panagiotou, C., Arridge, S. R., Hutton, B. F., Ourselin, S. (2010). ET Bayesian reconstruction using automatic bandwidth selection for joint entropy optimization. IEEE Nuclear Science Symposium Conference Record , 3301-3307 |
| Kezele, I., Alexander, D. C., Batchelor, P. G., Mangin, J. -. F., Le Bihan, D., Poupon, C. (2010). Measuring Microstructural Features Related to Neuronal Activation Using Diffusion MRI and Three-Compartment Diffusion Models: A Feasibility Study. International Society for Magnetic Resonance in Medicine 18th Annual Scientific Meeting and Exhibition: 2010 Proceedings. ( pp.1580-1580). Berkeley, US: International Society for Magnetic Resonance in Medicine. |
| Kezele, I., Batchelor, P. G., Poupon, C., Mangin, J. -. F., Le Bihan, D., Alexander, D. C. (2010). Feasibility of Measuring Microstructural Features of Systems with Intermediate Exchange and Sub-Cellular Compartmentalization Using Diffusion MRI. International Society for Magnetic Resonance in Medicine. ( pp.301-301). ISMRM. |
| Kleinnijenhuis, M., Barth, M., Alexander, D. C., Van Cappellen Van Walsum, A. -. M., Norris, D. G. (2010). SWI-Informed Diffusion Tensor Tractography. International Society for Magnetic Resonance in Medicine. ( pp.4021-4021). ISMRM. |
| Kumar, P., Thompson, S. A., Elhage, O., Challacombe, B. J., Penney, G., Hawkes, D. (2010). CLINICAL ASSESSMENT OF MRI GUIDED ROBOTIC RADICAL PROSTATECTOMY. J ENDOUROL 24, A84-A84 |
| Lee, B., Popescu, D. C., Ourselin, S. (2010). Topology modification for surgical simulation using precomputed finite element models based on linear elasticity. Prog Biophys Mol Biol 103(2-3), 236-251 doi:10.1016/j.pbiomolbio.2010.09.011. |
| Lehmann, M., Douiri, A., Kim, L. G., Modat, M., Chan, D., Ourselin, S., Barnes, J., Fox, N. C. (2010). Atrophy patterns in Alzheimer's disease and semantic dementia: A comparison of FreeSurfer and manual volumetric measurements. Neuroimage 49(3), 2264-2274 doi:10.1016/j.neuroimage.2009.10.056. |
| Lehmann, M., Rohrer, J. D., Clarkson, M. J., Ridgway, G. R., Scahill, R. I., Modat, M., Warren, J. D., Ourselin, S., Barnes, J., Rossor, M. N., Fox, N. C. (2010). Reduced Cortical Thickness in the Posterior Cingulate Gyrus is Characteristic of Both Typical and Atypical Alzheimer's Disease. J Alzheimer Dis 20(2), 587-598 doi:10.3233/JAD-2010-1401. |
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| Hu, M. X. (2008). Image guidance for robotic minimally invasive coronary artery bypass. 4th International Workshop on Medical Imaging and Augmented Reality (MIAR 2008). |
| Hu, M., Penney, G., Rueckert, D., Edwards, P., Figl, M., Pratt, P., Hawkes, D. (2008). A Novel Algorithm for Heart Motion Analysis Based on Geometric Constraints. Med Image Comput Comput Assist Interv 11(Pt 1), 720-728 Author URL |
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| Joshi, B., Fedorov, A., Chrisochoides, N., Warfield, S. K., Ourselin, S. (2008). A quantitative assessment of approaches to mesh generation for surgical simulation. Engineering in Computing 24(4), 417-430 doi:10.1007/s00366-008-0088-z. |
| Jurcak, V., Fripp, J., Engstrom, C., Walker, D., Salvado, O., Ourselin, S., Crozier, S. (2008). AUTOMATED SEGMENTATION OF THE QUADRATUS LUMBORUM MUSCLE FROM MAGNETIC RESONANCE IMAGES USING A HYBRID ATLAS BASED - GEODESIC ACTIVE CONTOUR SCHEME. 2008 30TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY, VOLS 1-8. ( pp.867-870). IEEE. |
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| Lillholm, M., Griffin, L. (2008). Larger feature alphabets can improve object recognition even with simpler visual words. PERCEPTION 37, 33-33 |
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| McGinty, J., Tahir, K. B., Soloviev, V. Y., Laine, R., Sardini, A., Talbot, C. B., Dunsby, C., Munro, I., Elson, D. S., Hajnal, J. V., Neil, M. A. A., Arridge, S. R., French, P. M. W. (2008). Time-Domain Fluorescence Lifetime Tomography. Biomedical Optics, BIOMED. St. Petersburg, Florida, USA: Optical Society of America (OSA). |
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| Zhuang, X., Hawkes, D. J., Crum, W. R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation. SPIE Medical Imaging. ( Vol. 6914 pp.7-). |
| Zhuang, X., Hawkes, D. J., Crum, W. R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P., Schaeffter, T., Razavi, R., Hill, D. L. G. (2008). Robust Registration between Cardiac MRI Images and Atlas for Segmentation Propagation. Proceedings of SPIE Vol. 6914 Medical Imaging 2008: Image Processing. ( Vol. 6914 pp.07-). |
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| Ourselin, S. (2002). Recalage d'images medicales par appariement de regions - Application la construction d'atlas histologiques 3D. |
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| Prima, S., Ourselin, S., Ayache, N. (2002). Computation of the mid-sagittal plane in 3-D brain images. IEEE Transactions on Medical Imaging 21(2), 122-138 |
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| King, A. P., Batchelor, P. G., Penney, G. P., Blackall, J. M., Hill, D. L. G., Hawkes, D. J. (2001). Estimating Sparse Deformation Fields Using Multiscale Bayesian Priors and 3-D Ultrasound. IPMI. |
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| Castellano Smith, A. D., Batchelor, P. G., Chitnis, X. A., Hill, D. L. G., Sharma, T. (2000). Cortical Shape Differences between Schizophrenics and Normals. 10th Biennial Winter Workshop on Schizophrenia. |
| Castellano Smith, A. D., Batchelor, P. G., Hill, D. L. G., Dean, A. D., Cox, T., Hawkes, D. J. (2000). The Shape of the Developing Foetal Cortex from MR Images. ISMRM. |
| Castellano Smith, A. D., Batchelor, P. G., Hill, D. L. G., Dean, A. D., Cox, T., Hawkes, D. J. (2000). he Shape of the Developing Foetal Cortex from MR Images. MIUA. |
| Clarkson, M. J. (2000). Editor of: Registration of Optical Images to 3D Medical Images. [Accepted] |
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| Hillman, E. M., Hebden, J. C., Schmidt, F. E., Arridge, S. R., Fry, M. E., Schweiger, M., Delpy, D. T. (2000). Initial clinical testing of the UCL 32 channel time-resolved instrument for optical tomography. OSA Technical Digest, Biomedical Topical Meetings (OSA, Washington DC). ( pp.100-102). |
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| Kolehmainen, V., Arridge, S. R., Vauhkonen, M., Kaipio, J. P. (2000). Simultaneous reconstruction of internal tissue region boundaries and coefficients in optical diffusion tomography. Physics in Medicine and Biology 45(11), 3267-3284 |
| Kolehmainen, V., Vauhkonen, M., Kaipio, J. P., Arridge, S. R. (2000). Recovery of piecewise constant coefficients in optical diffusion tomography. Optics express 7(13), 468-480 |
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| Ripoll, J., Arridge, S. R., Nieto-Vesperinas, M. (2000). Effect of roughness in non-diffusive regions within diffusive media. PHOTON MIGRATION, DIFFUSE SPECTROSCOPY AND OPTICAL COHERENCE TOMOGRAPHY: IMAGING AND FUNCTIONAL ASSESSMENT. ( Vol. 1 pp.185-195). SPIE-INT SOC OPTICAL ENGINEERING. |
| Roche, A., Pennec, X., Malandain, G., Ayache, N., Ourselin, S. (2000). Generalized correlation ratio for rigid registration of 3D ultrasound with MR images. INRIA. |
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| Tanner, C., Schnabel, A., Chung, D., Clarkson, M. J., Rueckert, D., Hill, D. L. G., Hawkes, D. J. (2000). Volume and shape preservation of enhancing lesions when applying non-rigid registration to a time series of contrast enhancing MR breast images. LNCS. ( Vol. 1935 pp.327-337). |
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