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David Hawkes

Layout Image

David Hawkes

Research

 

Dave Hawkes is currently the Director of the Centre for Medical Image Computing, previously having been Director of the EPSRC and MRC funded Interdisciplinary Research Collaboration on Medical Images and Signals (MIAS-IRC), an £8M six year programme, from 2003 to 2007 and Chairman of the Division of Imaging Sciences at KCL (2002-2004). He spent 10 years working as a clinical scientist within the NHS before returning to academia. He is co-Founder of IXICO Ltd. (www.ixico.com), a university spin-out that provides imaging solutions to the pharmaceutical industry. His current research interests encompass image matching, data fusion, visualisation, shape representation, surface geometry and modelling tissue deformation promoting medical imaging as an accurate measurement tool and image guided interventions.

Contact Details:

University College London
Centre for Medical Image Computing
3rd Floor
Engineering Front Building
Malet Place
London WC1E 6BT
United Kingdom

Office: 3.02
Tel: +44 (0)20 7679 0221 (Direct Dial)
Internal: 30321
Fax: +44 (0)20 7679 0225
Email: d.hawkes@ucl.ac.uk

Publications

2016

Vavourakis, V., Hipwell, J.H., Hawkes, D.J. (2016). An Inverse Finite Element u/p-Formulation to Predict the Unloaded State of In Vivo Biological Soft Tissues. Annals of Biomedical Engineering, 44 (1), 187-201. doi:10.1007/s10439-015-1405-5

2015

Bailey, C., Panagiotaki, E., Tunariu, N., Orton, M.R., Morgan, V.A., Feiweier, T., ...Alexander, D.C. (2015). Modelling tissue microstructure in bone metastases from prostate cancer using VERDICT MRI. Annual Meeting of the ISMRM Toronto, Canada.
Bailey, C., Vinnicombe, S., Panagiotaki, E., Waugh, S., Hipwell, J.H., Whelehan, P., ...Hawkes, D.J. (2015). Modelling vasculature and cellular restriction in breast tumours using diffusion MRI. Annual Meeting of the ISMRM Toronto, Canada.
Clarkson, M.J., Zombori, G., Thompson, S., Totz, J., Song, Y., Espak, M., ...Ourselin, S. (2015). The NifTK software platform for image-guided interventions: platform overview and NiftyLink messaging.. International Journal of Computer Assisted Radiology and Surgery, 10 (3), 301-316. doi:10.1007/s11548-014-1124-7
Hayashi, Y., Misawa, K., Oda, M., Hawkes, D.J., Mori, K. (2015). Clinical application of a surgical navigation system based on virtual laparoscopy in laparoscopic gastrectomy for gastric cancer.. International journal of computer assisted radiology and surgery,
Johnsen, S.F., Taylor, Z.A., Clarkson, M.J., Hipwell, J., Modat, M., Eiben, B., ...Hawkes, D.J. (2015). NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics.. International Journal of Computer Assisted Radiology and Surgery, 10 (7), 1077-1095. doi:10.1007/s11548-014-1118-5
Johnsen, S.F., Taylor, Z.A., Han, L., Hu, Y., Clarkson, M.J., Hawkes, D.J., Ourselin, S. (2015). Detection and modelling of contacts in explicit finite-element simulation of soft tissue biomechanics. International Journal of Computer Assisted Radiology and Surgery, doi:10.1007/s11548-014-1142-5
Johnsen, S.F., Thompson, S., Clarkson, M.J., Modat, M., Song, Y., Totz, J., ...Hawkes, D.J. (2015). Database-based estimation of liver deformation under pneumoperitoneum for surgical image-guidance and simulation. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).9350. doi:10.1007/978-3-319-24571-3_54.
Lacher, R.M., Hipwell, J.H., Williams, N.R., Keshtgar, M.R.S., Hawkes, D.J., Stoyanov, D. (2015). Low-cost surface reconstruction for aesthetic results assessment and prediction in breast cancer surgery. .Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS.2015-November. doi:10.1109/EMBC.2015.7319727.
Panagiotaki, E., Chan, R.W., Dikaios, N., Ahmed, H., O'Callaghan, J., Freeman, A., ...Alexander, D.C. (2015). Microstructural characterisation of normal and malignant human prostate tissue with VERDICT MRI. Investigative Radiology, 50 (4), 218-227. doi:10.1097/RLI.0000000000000115
Panagiotaki, E., Ianus, A., Johnston, E., Chan, R.W., Atkinson, D., P.u.n.w.a.n.i., ...Alexander, D. (2015). Optimised VERDICT MRI protocol for prostate cancer characterisation. Proceedings of the 23rd meeting of the International society for magnetic resonance in medicine 2015 Toronto.
Reis, S., Eiben, B., Mertzanidou, T., Hipwell, J., Hermsen, M., Van Der Laak, J., ...Hawkes, D. (2015). Minimum slice spacing required to reconstruct 3D shape for serial sections of breast tissue for comparison with medical imaging. .Progress in Biomedical Optics and Imaging - Proceedings of SPIE.9420. doi:10.1117/12.2081909.
Schneider, C., Desjardins, A.E., Gurusamy, K., Hawkes, D.J., Davidson, B.R. (2015). Laparoscopic manipulation of a probe-based confocal laser endomicroscope using a steerable intravascular catheter. Surgical Laparoscopy, Endoscopy and Percutaneous Techniques, 25 (2), e83-e85. doi:10.1097/SLE.0000000000000139
Song, Y., Totz, J., Thompson, S., Johnsen, S., Barratt, D., Schneider, C., ...Hawkes, D. (2015). Locally rigid, vessel-based registration for laparoscopic liver surgery. International Journal of Computer Assisted Radiology and Surgery, 10 (12), 1951-1961. doi:10.1007/s11548-015-1236-8
Thompson, S., Totz, J., Song, Y., Stoyanov, D., Ourselin, S., Hawkes, D., Clarkson, M. (2015). Accuracy validation of an image guided laparoscopy system for liver resection. .Progress in Biomedical Optics and Imaging - Proceedings of SPIE.9415. doi:10.1117/12.2080974.

2014

Allan, M., Thompson, S., Clarkson, M., Ourselin, S., Hawkes, D., Kelly, J., Stoyanov, D. (2014). 2D-3D pose tracking of rigid instruments in minimally invasive surgery. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).8498 LNCS. doi:10.1007/978-3-319-07521-1-1.
Bailey, C., Vinnicombe, S., Panagiotaki, E., Waugh, S.A., Hipwell, J.H., Alexander, D.C., ...Evans, A. (2014). Modeling vascularity in breast cancer and surrounding stroma using diffusion MRI and intravoxel incoherent motion. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).8539 LNCS. doi:10.1007/978-3-319-07887-8_53.
Bragman, F.J.S., McClelland, J.R., Modat, M., Ourselin, S., Hurst, J.R., Hawkes, D.J. (2014). Multi-scale analysis of imaging features and its use in the study of COPD exacerbation susceptible phenotypes. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8675 LNCS (PART 3), 417-424. doi:10.1007/978-3-319-10443-0_53
Clarkson, M.J., Zombori, G., Thompson, S., Totz, J., Song, Y., Espak, M., ...Ourselin, S. (2014). The NifTK Software Platform for Image Guided Interventions. International Journal of Computer Assisted Radiology and Surgery,
Eiben, B., Vavourakis, V., Hipwell, J.H., Kabus, S., Lorenz, C., Buelow, T., Hawkes, D.J. (2014). Breast deformation modelling: Comparison of methods to obtain a patient specific unloaded configuration. .Progress in Biomedical Optics and Imaging - Proceedings of SPIE.9036. doi:10.1117/12.2043607.
Han, L., Hawkes, D.J., Barratt, D.C. (2014). A hybrid biomechanical model-based image registration method for sliding objects. .MEDICAL IMAGING 2014: IMAGE PROCESSING.9034. doi:10.1117/12.2043749.
Han, L., Hipwell, J., Eiben, B., Barratt, D.C., Ourselin, S., Hawkes, D.J. (2014). A Non-linear Biomechanical Model Based Registration Method for Aligning Prone and Supine MR Breast Images. IEEE Transactions on Medical Imaging, 33 (3), 682-694. doi:10.1109/TMI.2013.2294539
Helbren, E., Roth, H.R., Hampshire, T.E., Pickhardt, P.J., Taylor, S.A., Hawkes, D.J., Halligan, S. (2014). CT colonography: clinical evaluation of a method for automatic coregistration of polyps at follow-up surveillance studies.. Radiology, 273 (2), 417-424. doi:10.1148/radiol.14140473
Johnson, S.P., Schneider, C., Desjardins, A., Walker-Samuel, S., Hawkes, D. (2014). Confocal fluorescence endomicroscopy in vivo for the detection of tumour microenvironment and healthy tissue margin. EUROPEAN JOURNAL OF CANCER, 50 S168-S169.
Martin, J., McClelland, J., Yip, C., Thomas, C., Hartill, C., Ahmad, S., ...Hawkes, D. (2014). Fully-deformable patient motion models from cone-beam CT for radiotherapy applications. Journal of Physics: Conference Series, 489 (1), doi:10.1088/1742-6596/489/1/012034
McClelland, J.R., Champion, B.A.S., Hawkes, D.J. (2014). Combining Image Registration, Respiratory Motion Modelling, and Motion Compensated Image Reconstruction. .BIOMEDICAL IMAGE REGISTRATION (WBIR 2014).8545.
Mertzanidou, T., Hipwell, J., Dalmis, M., Platel, B., Van Der Laak, J., Mann, R., ...Hawkes, D. (2014). Towards spatial correspondence between specimen and in-vivo breast imaging. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).8539 LNCS. doi:10.1007/978-3-319-07887-8_93.
Mertzanidou, T., Hipwell, J., Johnsen, S., Han, L., Eiben, B., Taylor, Z., ...Bick, U. (2014). MRI to X-ray mammography intensity-based registration with simultaneous optimisation of pose and biomechanical transformation parameters.. Medical Image Analysis, 18 (4), 674-683. doi:10.1016/j.media.2014.03.003
Panagiotaki, E., Chan, R.W., Dikaios, N., Ahmed, H., Atkinson, D., Punwani, S., ...Alexander, D.C. (2014). Microstructural characterisation of normal and malignant human prostate tissue with VERDICT-MRI. Proceedings of the 23rd meeting of the International society for magnetic resonance in medicine 2014 .
Panagiotaki, E., Chan, R.W., Dikaios, N., Ahmed, H.U., O'Callaghan, J., Freeman, A., ...Alexander, D.C. (2014). Microstructural characterization of normal and malignant human prostate tissue with vascular, extracellular, and restricted diffusion for cytometry in tumours magnetic resonance imaging.. Investigative Radiology, doi:10.1097/RLI.0000000000000115
Roth, H.R., Hampshire, T.E., Helbren, E., Hu, M., Vega, R., Halligan, S., Hawkes, D.J. (2014). Computer-assisted polyp matching between optical colonoscopy and CT colonography: a phantom study. MEDICAL IMAGING 2014: IMAGE-GUIDED PROCEDURES, ROBOTIC INTERVENTIONS, AND MODELING, 9036 doi:10.1117/12.2042860
Totz, J., Thompson, S., Stoyanov, D., Gurusamy, K., Davidson, B., Hawkes, D., Clarkson, M. (2014). Fast semi-dense surface reconstruction from stereoscopic video in laparoscopic surgery.. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).8498 LNCS. doi:10.1007/978-3-319-07521-1-22.
White, M.J., Thornton, J.S., Hawkes, D.J., Hill, D.L., Kitchen, N., Mancini, L., ...Yousry, T. (2014). Design, operation, and safety of single-room interventional MRI suites: practical experience from two centers.. Journal of Magnetic Resonance Imaging, doi:10.1002/jmri.24577

2013

Allan, M., Ourselin, S., Thompson, S., Hawkes, D.J., Kelly, J., Stoyanov, D. (2013). Toward detection and localization of instruments in minimally invasive surgery.. IEEE Transactions on Biomedical Engineering, 60 (4), 1050-1058. doi:10.1109/TBME.2012.2229278
Boone, D.J., Halligan, S., Roth, H.R., Hampshire, T.E., Helbren, E., Slabaugh, G.G., ...Punwani, S. (2013). CT colonography: external clinical validation of an algorithm for computer-assisted prone and supine registration.. Radiology, 268 (3), 752-760. doi:10.1148/radiol.13122083
Eiben, B., Han, L., Hipwell, J., Mertzanidou, T., Kabus, S., Buelow, T., ...Keshtgar, M. (2013). Biomechanically guided prone-to-supine image registration of breast MRI using an estimated reference state. .Proceedings - International Symposium on Biomedical Imaging. doi:10.1109/ISBI.2013.6556450.
Garvey, C.C., Cahill, N.D., Melbourne, A., Tanner, C., Ourselin, S., Hawkes, D.J. (2013). Nonrigid image registration with two-sided space-fractional partial differential equations. 2013 IEEE International Conference on Image Processing, ICIP 2013 - Proceedings, 747-751. doi:10.1109/ICIP.2013.6738154
Hampshire, T., Helbren, E., Plumb, A., Roth, H., Halligan, S., Hawkes, D. (2013). Spatial Correspondence between Prone and Supine CT Colonography Images: Creating a Reference Standard. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).8198 LNCS. doi:10.1007/978-3-642-41083-3_5.
Hampshire, T., Roth, H.R., Helbren, E., Plumb, A., Boone, D., Slabaugh, G., ...Hawkes, D.J. (2013). Endoluminal surface registration for CT colonography using haustral fold matching. Medical Image Analysis, 17 (8), 946-958. doi:10.1016/j.media.2013.04.006
Martin, J., McClelland, J., Yip, C., Thomas, C., Hartill, C., Ahmad, S., ...Hawkes, D. (2013). Building motion models of lung tumours from cone-beam CT for radiotherapy applications.. PHYSICS IN MEDICINE AND BIOLOGY, 58 (6), 1809-1822. doi:10.1088/0031-9155/58/6/1809
McClelland, J.R., Hawkes, D.J., Schaeffter, T., King, A.P. (2013). Respiratory motion models: a review.. MEDICAL IMAGE ANALYSIS, 17 (1), 19-42. doi:10.1016/j.media.2012.09.005
Miquel, M.E., Blackall, J.M., Uribe, S., Hawkes, D.J., Schaeffter, T. (2013). Patient-specific respiratory models using dynamic 3D MRI: Preliminary volunteer results. PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS, 29 (2), 214-220. doi:10.1016/j.ejmp.2012.03.003
Roth, H., McClelland, J., Hampshire, T., Boone, D., Hu, Y., Modat, M., ...Hawkes, D.J. (2013). Registration of Prone and Supine CT Colonography Datasets with Differing Endoluminal Distension.. In (pp. 29-38). .
Roth, H.R., Helbren, E., Hampshire, T.E., Pickhardt, P.J., Halligan, S., Hawkes, D.J. (2013). Registration of Temporally Separated CT Colonography Cases. .ABDOMINAL IMAGING: COMPUTATION AND CLINICAL APPLICATIONS.8198.
Roth, H.R., McClelland, J.R., Modat, M., Hampshire, T.E., Boone, D.J., Helbren, E., ...Halligan, S. (2013). CT colonography: Inverse-consistent symmetric registration of prone and supine inner colon surfaces. .Progress in Biomedical Optics and Imaging - Proceedings of SPIE.8669. doi:10.1117/12.2007004.
Thompson, S., Penney, G., Billia, M., Challacombe, B., Hawkes, D., Dasgupta, P. (2013). Design and evaluation of an image-guidance system for robot-assisted radical prostatectomy.. BJU International, 111 (7), 1081-1090. doi:10.1111/j.1464-410X.2012.11692.x
Thompson, S., Penney, G., Dasgupta, P., Hawkes, D. (2013). Improved Modelling of Tool Tracking Errors by Modelling Dependent Marker Errors. IEEE Transactions on Medical Imaging, 32 (2), 165-177. doi:10.1109/TMI.2012.2216890

2012

Allain, B., Hu, M., Lovat, L.B., Cook, R.J., Vercauteren, T., Ourselin, S., Hawkes, D.J. (2012). Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty.. Medical Image Analysis, 16 (2), 482-496. doi:10.1016/j.media.2011.11.005
Daga, P., Winston, G., Modat, M., White, M., Mancini, L., Cardoso, M., ...Ourselin, S. (2012). Accurate localisation of optic radiation during neurosurgery in an interventional MRI Suite. IEEE Transactions on Medical Imaging, 31 (4), 882-891. doi:10.1109/TMI.2011.2179668
Han, L., Hipwell, J.H., Tanner, C., Taylor, Z., Mertzanidou, T., Cardoso, J., ...Hawkes, D.J. (2012). Development of patient-specific biomechanical models for predicting large breast deformation.. Physics in Medicine and Biology, 57 (2), 455-472. doi:10.1088/0031-9155/57/2/455
Hawkes, D.J., Mertzanidou, T., Hipwell, J., Atkinson, D., Roth, H., Hampshire, T. (2012). Establishing spatial correspondence for the analysis of images from highly deforming anatomy. .Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference.
Hu, M., Penney, G., Figl, M., Edwards, P., Bello, F., Casula, R., ...Hawkes, D. (2012). Reconstruction of a 3D surface from video that is robust to missing data and outliers: application to minimally invasive surgery using stereo and mono endoscopes.. MEDICAL IMAGE ANALYSIS, 16 (3), 597-611. doi:10.1016/j.media.2010.11.002
Hu, Y., Ahmed, H.U., Carter, T., Arumainayagam, N., Lecornet, E., Barzell, W., ...Villers, A. (2012). A biopsy simulation study to assess the accuracy of several transrectal ultrasonography (TRUS)-biopsy strategies compared with template prostate mapping biopsies in patients who have undergone radical prostatectomy.. BJU International, 110 (6), 812-820. doi:10.1111/j.1464-410X.2012.10933.x
Hu, Y., Ahmed, H.U., Taylor, Z., Allen, C., Emberton, M., Hawkes, D., Barratt, D. (2012). MR to ultrasound registration for image-guided prostate interventions.. Medical Image Analysis, 16 (3), 687-703. doi:10.1016/j.media.2010.11.003
Johnsen, S.F., Taylor, Z.A., Clarkson, M.J., Thompson, S., Hu, M., Gurusamy, K., ...Ourselin, S. (2012). Explicit contact modeling for surgical computer guidance and simulation. .Progress in Biomedical Optics and Imaging - Proceedings of SPIE.8316. doi:10.1117/12.911787.
Lecornet, E., Ahmed, H.U., Hu, Y., Moore, C.M., Nevoux, P., Barratt, D., ...Emberton, M. (2012). The accuracy of different biopsy strategies for the detection of clinically important prostate cancer: a computer simulation.. Journal of Urology, 188 (3), 974-980. doi:10.1016/j.juro.2012.04.104
McClelland, J., Suh, Y., Ahmad, S., Hawkes, D. (2012). Study of Deformable Registration Based 4DCT Ventilation Imaging Methods. .MEDICAL PHYSICS.39.
Melbourne, A., Cahill, N., Tanner, C., Modat, M., Hawkes, D.J., Ourselin, S. (2012). Using fractional gradient information in non-rigid image registration: Application to breast MRI. Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 8314 doi:10.1117/12.911173
Mertzanidou, T., Hipwell, J., Cardoso, M.J., Zhang, X., Tanner, C., Ourselin, S., ...Hawkes, D. (2012). MRI to X-ray mammography registration using a volume-preserving affine transformation.. Medical Image Analysis, 16 (5), 966-975. doi:10.1016/j.media.2012.03.001
Mertzanidou, T., Hipwell, J.H., Han, L., Taylor, Z.A., Huisman, H.J., Bick, U., ...Hawkes, D.J. (2012). Intensity-Based MRI to X-ray Mammography Registration with an Integrated Fast Biomechanical Transformation.. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).7361 LNCS. doi:10.1007/978-3-642-31271-7_7.
Roth, H., Boone, D., Halligan, S., Hampshire, T., McClelland, J., Hu, M., ...Hawkes, D. (2012). External Clinical Validation of Prone and Supine CT Colonography Registration. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 7601 LNCS 10-19. doi:10.1007/978-3-642-33612-6_2
Roth, H., McClelland, J., Modat, M., Hampshire, T., Boone, D., Hu, M., ...Hawkes, D. (2012). Inverse-Consistent Symmetric Registration of Inner Colon Surfaces Derived From Prone and Supine CT Colonography. .MEDICAL PHYSICS.39.
Thompson, S., Penney, G., Challacombe, B., Hawkes, D., Dasgupta, P. (2012). EVALUATION OF IMAGE GUIDANCE SYSTEMS FOR ROBOT ASSISTED RADICAL PROSTATECTOMY. JOURNAL OF ENDOUROLOGY, 26 A407.
Yang, G., Hipwell, J.H., Hawkes, D.J., Arridge, S.R. (2012). A Nonlinear Least Squares Method for Solving the Joint Reconstruction and Registration Problem in Digital Breast Tomosynthesis. .Proceedings of Medical Image Understanding and Analysis 2012.
Yang, G., Hipwell, J.H., Tanner, C., Hawkes, D.J., Arridge, S.R. (2012). Joint Registration and Limited-Angle Reconstruction of Digital Breast Tomosynthesis. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).7361 LNCS. doi:10.1007/978-3-642-31271-7_92.

2011

Ahmed, H.U., Hu, Y., Carter, T., Lecornet, E., Freeman, A., Hawkes, D.J., ...Emberton, M. (2011). Characterising Clinically Significant Prostate Cancer using Template Prostate Mapping Biopsy.. J UROLOGY, 186 (2), 458-464. doi:10.1016/j.juro.2011.03.147
Clarkson, M.J., Modat, M., Han, L., Ourselin, S., Hawkes, D.J., Alexander, D.C., ...Barrat, D. (2011). The UCL Centre for Medical Image Computing (CMIC): An integrated suite of open source software tools to support imaging research in Neurosciences, Oncology and Cardiovascular Sciences. ECR 2011 EIBIR IMAGINE workshop. Vienna, Austria.
Cleary, J.O., Modat, M., Norris, F.C., Price, A.N., Jayakody, S.A., Martinez-Barbera, J.P., ...Scambler, P.J. (2011). Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping.. NEUROIMAGE, 54 (2), 769-778. doi:10.1016/j.neuroimage.2010.07.039
Daga, P. (2011). Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. .2011 8TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO.
Daga, P., Winston, G., Modat, M., Cardoso, M.J., Stretton, J., Symms, M., ...Ourselin, S. (2011). Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. 21st Meeting of the European-Neurological-Society Lisbon, PORTUGAL.JOURNAL OF NEUROLOGY.258.
Hampshire, T., Roth, H., Hu, M., Boone, D., Slabaugh, G., Punwani, S., ...Hawkes, D. (2011). Automatic prone to supine haustral fold matching in CT colonography using a Markov random field model.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 14 (Pt 1), 508-515.
Han, L., HIPWELL, J., Mertzanidou, T., Carter, T., Modat, M., Ourselin, S., Hawkes, D. (2011). A HYBRID FEM-BASED METHOD FOR ALIGNING PRONE AND SUPINE IMAGES FOR IMAGE GUIDED BREAST SURGERY. .Proceedings - International Symposium on Biomedical Imaging. doi:10.1109/ISBI.2011.5872626.
Hu, Y., Carter, T.J., Ahmed, H.U., Emberton, M., Allen, C., Hawkes, D.J., Barratt, D.C. (2011). Modelling prostate motion for data fusion during image-guided interventions.. IEEE T MED IMAGING, 30 (11), 1887-1900. doi:10.1109/TMI.2011.2158235
Jafar, Y., HIPWELL, J., Tanner, C., Melbourne, A., Hawkes, D. (2011). DISCRETISATION OF 3D DEFORMATION FIELDS: IMPLICATIONS FOR ESTABLISHING CORRESPONDENCE BETWEEN 2D X-RAY MAMMOGRAPHIC PROJECTIONS. .2011 8TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO.
Lecornet, E., Ahmed, H.U., Hu, Y., Moore, C.M., Nevoux, P., Barratt, D., ...Emberton, M. (2011). PERFORMANCE CHARACTERISTICS OF DIFFERENT TRANSRECTAL (TRB) AND TRANSPERINEAL MAPPING PROSTATE BIOPSY (TPB) STRATEGIES: A SIMULATION ON 96 CYSTOPROSTATECTOMY SPECIMENS (CPTS). Presented at: .
McClelland, J.R., Hughes, S., Modat, M., Qureshi, A., Ahmad, S., Landau, D.B., ...Hawkes, D.J. (2011). Inter-fraction variations in respiratory motion models.. PHYS MED BIOL, 56 (1), 251-272. doi:10.1088/0031-9155/56/1/015
Melbourne, A., Cahill, N.D., Tanner, C., Hawkes, D.J., I.E.E.E. (2011). IMAGE REGISTRATION USING AN EXTENDABLE QUADRATIC REGULARISER. .Proceedings - International Symposium on Biomedical Imaging. doi:10.1109/ISBI.2011.5872468.
Melbourne, A., Hipwell, J., Modat, M., Mertzanidou, T., Huisman, H., Ourselin, S., Hawkes, D.J. (2011). The effect of motion correction on pharmacokinetic parameter estimation in dynamic-contrast-enhanced MRI.. Physics in Medicine and Biology, 56 (24), 7693-7708. doi:10.1088/0031-9155/56/24/001
Menys, A., Ahmed, A., Punwani, S., Odille, F., Steward, M., ATKINSON, D., ...Taylor, S.A. (2011). Quantified small bowel motility during MR enterography in Crohn’s disease as a marker of inflammatory activity.. UKRC Manchester.
Modat, M., Ridgway, G.R., Daga, P., Cardoso, M.J., Hawkes, D.J., Ashburner, J., Ourselin, S. (2011). Log-Euclidean free-form deformation. Conference on Medical Imaging 2011 - Image Processing Lake Buena Vista, FL.MEDICAL IMAGING 2011: IMAGE PROCESSING.7962. doi:10.1117/12.878189.
Pinto Pereira, S.M., McCormack, V.A., Hipwell, J.H., Record, C., Wilkinson, L.S., Moss, S.M., ...dos-Santos-Silva, I. (2011). Localized fibroglandular tissue as a predictor of future tumor location within the breast.. CANCER EPIDEM BIOMAR, 20 (8), 1718-1725. doi:10.1158/1055-9965.EPI-11-0423
Rijkhorst, E.J., Rivens, I., Haar, G.T., Hawkes, D., Barratt, D. (2011). Effects of respiratory liver motion on heating for gated and model-based motion-compensated high-intensity focused ultrasound ablation.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, MICCAI 2011, PT I, 6891 605-612.
Roth, H.R., McClelland, J.R., Boone, D.J., Modat, M., Cardoso, M.J., Hampshire, T.E., ...Slabaugh, G.G. (2011). Registration of the endoluminal surfaces of the colon derived from prone and supine CT colonography. MED PHYS, 38 (6), 3077-3089. doi:10.1118/1.3577603
Tanner, C., White, M., Guarino, S., Hall-Craggs, M.A., Douek, M., Hawkes, D.J. (2011). Large breast compressions: Observations and evaluation of simulations. MED PHYS, 38 (2), 682-690. doi:10.1118/1.3525837
Thompson, S.A., Hu, M., Johnsen, S., Gurusamy, K., Davidson, B., Hawkes, D. (2011). Towards Image Guided Laparoscopic Liver Surgery, Defining the System Requirement. LIVIM (Living Imaging) 2011 IRCAD, Strasbourg.
Yang, G., Hipwell, J.H., Hawkes, D.J., Arridge, S.R. (2011). Unconstrained Simultaneous Scheme to Fully Couple Reconstruction and Registration for Digital Breast Tomosynthesis: A Feasible Study. .Proceedings of the Workshop on Breast Image Analysis: In conjunction with the 14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2011).
Yang, G., Hipwell, J.H., Tanner, C., Hawkes, D.J., Arridge, S.R. (2011). Alternating Reconstruction and Registration for Digital Breast Tomosynthesis. .Proceedings of the UK Radiological Congress 2011: 6-8 June 2011, Manchester UK.
Zhuang, X., Arridge, S., Hawkes, D.J., Ourselin, S. (2011). A nonrigid registration framework using spatially encoded mutual information and free-form deformations.. IEEE T MED IMAGING, 30 (10), 1819-1828. doi:10.1109/TMI.2011.2150240
Zhuang, X., Shi, W., Duckett, S.G., Wang, H., Razavi, R., Hawkes, D.J., ...Ourselin, S. (2011). A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions.. .Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).6666 LNCS. doi:10.1007/978-3-642-21028-0_47.

2010

Allain, B., Hu, M., Lovat, L.B., Cook, R.J., Vercauteren, T., Ourselin, S., Hawkes, D.J. (2010). A system for biopsy site re-targeting with uncertainty in gastroenterology and oropharyngeal examinations.. 13th International Conference on Medical Image Computing and Computer-Assisted Intervention China Natl Convent Ctr, Beijing, PEOPLES R CHINA.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2010, PT II,.6362.
Han, L., Hipwell, J.H., Taylor, Z.A., Tanner, C., Ourselin, S., Hawkes, D.J. (2010). Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method.. 10th International Workshop on Digital Mammography Girona, SPAIN.DIGITAL MAMMOGRAPHY.6136.
Hu, M., Penney, G., Rueckert, D., Edwards, P., Bello, F., Figl, M., ...Miao, Z. (2010). A Robust Mosaicing Method with Super-Resolution for Optical Medical Images. .MEDICAL IMAGING AND AUGMENTED REALITY.6326.
Hu, M.X. (2010). Image Guidance for Robotic Minimally Invasive Coronary Artery Bypass. .COMPUTERIZED MEDICAL IMAGING AND GRAPHICS.34. doi:10.1016/j.compmedimag.2009.08.002.
Hu, Y., Rijkhorst, E.-.J., Manber, R., Hawkes, D.J., Barratt, D.C. (2010). Deformable Vessel-Based Registration Using Landmark-Guided Coherent Point Drift.. 5th International Workshop on Medical Imaging and Augmented Reality China Natl Convent Ctr, Beijing, PEOPLES R CHINA.MEDICAL IMAGING AND AUGMENTED REALITY.6326.
Hu, Y., van den Boom, R., Carter, T., Taylor, Z., Hawkes, D., Ahmed, H.U., ...Barratt, D. (2010). A comparison of the accuracy of statistical models of prostate motion trained using data from biomechanical simulations.. PROG BIOPHYS MOL BIO, 103 (2-3), 262-272. doi:10.1016/j.pbiomolbio.2010.09.009
Jafar, Y.M., Hipwell, J.H., Tanner, C., Hawkes, D.J. (2010). Detection of Stable Mammographic Features under Compression using Simulated Mammograms. Conference on Medical Imaging 2010 - Image Processing San Diego, CA.MEDICAL IMAGING 2010: IMAGE PROCESSING.7623. doi:10.1117/12.844124.
Kumar, P., Thompson, S.A., Elhage, O., Challacombe, B.J., Penney, G., Hawkes, D. (2010). CLINICAL ASSESSMENT OF MRI GUIDED ROBOTIC RADICAL PROSTATECTOMY. J ENDOUROL, 24 A84.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2010). Data driven groupwise registration of diffusion weighted images. Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on Rotterdam. doi:10.1109/ISBI.2010.5490336.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2010). Data driven groupwise registration of diffusion weighted images.. 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro Rotterdam, NETHERLANDS.2010 7TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO.
Melbourne, A., Hipwell, J.H., Hawkes, D.J. (2010). The Effect of Motion Correction on Pharmacokinetic Parameter Estimation.. 10th International Workshop on Digital Mammography Girona, SPAIN.DIGITAL MAMMOGRAPHY.6136.
Melbourne, A., Ridgway, G., Hawkes, D.J. (2010). Image Similarity Metrics in Image Registration. Conference on Medical Imaging 2010 - Image Processing San Diego, CA.MEDICAL IMAGING 2010: IMAGE PROCESSING.7623. doi:10.1117/12.840389.
Mertzanidou, T., Hipwell, J.H., Cardoso, M.J., Tanner, C., Ourselin, S., Hawkes, D.J. (2010). X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification.. 10th International Workshop on Digital Mammography Girona, SPAIN.DIGITAL MAMMOGRAPHY.6136.
Mertzanidou, T., Hipwell, J.H., Tanner, C., Hawkes, D.J. (2010). An intensity-based approach to X-ray mammography - MRI registration. Conference on Medical Imaging 2010 - Image Processing San Diego, CA.MEDICAL IMAGING 2010: IMAGE PROCESSING.7623. doi:10.1117/12.843988.
Modat, M., Ridgway, G.R., Hawkes, D.J., Fox, N.C., Ourselin, S. (2010). Nonrigid registration with differential bias correction using normalised mutual information. 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro Rotterdam, NETHERLANDS.2010 7TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO.
Modat, M., Ridgway, G.R., Taylor, Z.A., Lehmann, M., Barnes, J., Hawkes, D.J., ...Ourselin, S. (2010). Fast free-form deformation using graphics processing units.. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 98 (3), 278-284. doi:10.1016/j.cmpb.2009.09.002
Modat, M., Taylor, Z., Ridgway, G., Barnes, J., Wild, E., Hawkes, D.J., ...Ourselin, S. (2010). Nonlinear Elastic Spline Registration: Evaluation with Longitudinal Huntington’s Disease Data. 4th Workshop on Biomedical Image Registration Inst Math & Image Processing, Lubeck, GERMANY.BIOMEDICAL IMAGE REGISTRATION.6204.
Modat, M., Vercauteren, T., Ridgway, G.R., Hawkes, D.J., Fox, N.C., Ourselin, S. (2010). Diffeomorphic demons using normalized mutual information, evaluation on multimodal brain MR images. Conference on Medical Imaging 2010 - Image Processing San Diego, CA.MEDICAL IMAGING 2010: IMAGE PROCESSING.7623. doi:10.1117/12.843962.
Pereira, S.M.P., Hipwell, J.H., McCormack, V.A., Tanner, C., Moss, S.M., Wilkinson, L.S., ...Kliger, C.J. (2010). Automated registration of diagnostic to prediagnostic x-ray mammograms: Evaluation and comparison to radiologists' accuracy. MED PHYS, 37 (9), 4530-4539. doi:10.1118/1.3457470
Pereira, S.P., McCormack, V., Hipwell, J., Record, C., Wilkinson, L., Moss, S., ...Silva, I. (2010). Do breast cancers arise in areas of the breast that pre-diagnostically had high mammographic density?. 21st Meeting of the European-Association-for-Cancer-Research Oslo, NORWAY.EJC SUPPLEMENTS.8.
Rijkhorst, E.-.J., Heanes, D., Odille, F., Hawkes, D.J., Barratt, D.C. (2010). Simulating Dynamic Ultrasound Using MR-derived Motion Models to Assess Respiratory Synchronisation for Image-Guided Liver Interventions.. 1st International Conference on Information Processing in Computer-Assisted Interventions (IPCAI 2010) Geneva, SWITZERLAND.INFORMATION PROCESSING IN COMPUTER-ASSISTED INTERVENTIONS.6135.
Roth, H., McClelland, J., Boone, D., Hu, M., Ourselin, S., Slabaugh, G., ...Medicsight, P.L.C. (2010). Conformal Mapping of the Inner Colon Surface to a Cylinder for the Application of Prone to Supine Registration. Medical Image Understanding and Analysis (MIUA) .
Roth, H., McClelland, J., Modat, M., Boone, D., Hu, M., Ourselin, S., ...Hawkes, D. (2010). Establishing spatial correspondence between the inner colon surfaces from prone and supine CT colonography.. 13th International Conference on Medical Image Computing and Computer-Assisted Intervention China Natl Convent Ctr, Beijing, PEOPLES R CHINA.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2010, PT III.6363.
Rueckert, D., Hawkes, D., Gerig, G., Yang, G.-.Z. (2010). Special Issue on the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2009. MEDICAL IMAGE ANALYSIS, 14 (5), 631-632. doi:10.1016/j.media.2010.06.008
Yang, G., Hipwell, J.H., Clarkson, M.J., Tanner, C., Mertzanidou, T., Gunn, S., ...Arridge, S.R. (2010). Combined Reconstruction and Registration of Digital Breast Tomosynthesis. 10th International Workshop on Digital Mammography Girona, SPAIN.DIGITAL MAMMOGRAPHY.6136.
Yang, G., Hipwell, J.H., Clarkson, M.J., Tanner, C., Mertzanidou, T., Gunn, S., ...Arridge, S.R. (2010). Combined Reconstruction and Registration of Digital Breast Tomosynthesis: Sequential Method versus Iterative Method. .Proceedings of Medical Image Understanding and Analysis 2010.
Zhuang, X., Hawkes, D.J., Ourselin, S. (2010). Spatial Information Encoded Mutual Information for Nonrigid Registration.. 4th Workshop on Biomedical Image Registration Inst Math & Image Processing, Lubeck, GERMANY.BIOMEDICAL IMAGE REGISTRATION.6204.
Zhuang, X., Leung, K., Rhode, K., Razavi, R., Hawkes, D., Ourselin, S. (2010). Whole Heart Segmentation of Cardiac MRI Using Multiple Path Propagation Strategy. 13th International Conference on Medical Image Computing and Computer-Assisted Intervention China Natl Convent Ctr, Beijing, PEOPLES R CHINA.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2010, PT I.6361.
Zhuang, X., Rhode, K.S., Razavi, R.S., Hawkes, D.J., Ourselin, S. (2010). A registration-based propagation framework for automatic whole heart segmentation of cardiac MRI.. IEEE T MED IMAGING, 29 (9), 1612-1625. doi:10.1109/TMI.2010.2047112
Zhuang, X., Yao, C., Ma, Y., Hawkes, D.J., Penney, G.P., Ourselin, S. (2010). Registration-based propagation for whole heart segmentation from compounded 3D echocardiography.. 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro Rotterdam, NETHERLANDS.2010 7TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO.

2009

Allain, B., Hu, M.X., Lovat, L.B., Ourselin, S., Cook, R., Hawkes, D.J. (2009). Biopsy Site Re-localisation based on the Computation of Epipolar Lines from Two Previous Endoscopic Images. 12th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2009) Imperial Coll, London, ENGLAND.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2009, PT I, PROCEEDINGS.5761.
Allain, B., Price, A., Vercauteren, T.K., Cook, R.J., Ourselin, S., Lythgoe, M.F., Hawkes, D.J. (2009). Precision of Confocal Miniprobe Localisation Assessed By High-Field Magnetic Resonance Imaging. Annual Meeting of the American-Society-for-Gastrointestinal-Endoscopy/Digestive Disease Week Chicago, IL.GASTROINTESTINAL ENDOSCOPY.69.
Hughes, S., Boutland, J., Adams, M., McClelland, J., Deehan, C., Hawkes, D., Landau, D. (2009). A study to find a suitable fiducial marker to validate the use of non-rigid registration (NRR) algorithms and 4D-CT motion modelling in lung cancer radiotherapy. LUNG CANCER, 63 S34.
Hughes, S., McClelland, J., Tarte, S., Lawrence, D., Ahmad, S., Hawkes, D., Landau, D. (2009). Assessment of two novel ventilatory surrogates for use in the delivery of gated/tracked radiotherapy for non-small cell lung cancer. RADIOTHER ONCOL, 91 (3), 336-341. doi:10.1016/j.radonc.2009.03.016
Hu, M.X., Penney, G.P., Rueckert, D., Edwards, P.J., Bello, F., Casula, R., ...Hawkes, D.J. (2009). Non-rigid Reconstruction of the Beating Heart Surface for Minimally Invasive Cardiac Surgery. 12th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2009) Imperial Coll, London, ENGLAND.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2009, PT I, PROCEEDINGS.5761.
Hu, Y.P., Ahmed, H.U., Allen, C., Pendse, D., Sahu, M., Emberton, M., ...Barratt, D. (2009). MR to Ultrasound Image Registration for Guiding Prostate Biopsy and Interventions. 12th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2009) Imperial Coll, London, ENGLAND.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2009, PT I, PROCEEDINGS.5761.
King, A.P., Boubertakh, R., Rhode, K.S., Ma, Y.L., Chinchapatnam, P., Gao, G., ...Gill, J.S. (2009). A subject-specific technique for respiratory motion correction in image-guided cardiac catheterisation procedures. MED IMAGE ANAL, 13 (3), 419-431. doi:10.1016/j.media.2009.01.003
Melbourne, A., Collins, D.J., Leach, M.O., Koh, D.-.M., Hawkes, D.J., Atkinson, D. (2009). Contrast Enhanced Image Registration using Kullbach-Leibler Assisted Image Matching and Patching (KLAMP). ISMRM 2009 .
Melbourne, A., Hawkes, D.J., Atkinson, D. (2009). Image registration using uncertainty coefficients. IEEE Internaional Symposium on Biomedical Imaging - From Nano to Macro Boston, MA.2009 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1 AND 2.
Melbourne, A., Orton, M., Collins, D.J., Koh, D.-.M., Leach, M.O., Hawkes, D.J., Atkinson, D. (2009). The effect of image registration on pharmacokinetic parameter extraction using 3D DCE-MRI. ISMRM 2009 .
Miyazaki, K., Orton, M.R., Koh, D.-.M., Lewington, V., Atkinson, D., Hawkes, D.J., ...Collins, D.J. (2009). Evaluation of slope-based hepatic perfusion index quantification methods against dual-input kinetic model based approach. ISMRM 2009 .
Miyazaki, K., Orton, M.R., Lewington, V., Atkinson, D., Hawkes, D.J., Leach, M.O., Collins, D.J. (2009). Hepatic perfusion quantification using a dual-input kinetic model with a novel portal venous estimation method: Evaluation against other model- and slope-based perfusion quantification approaches. ISMRM 2009 .
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2009). Onset estimation for dual input DCE-MRI liver data : information criteria used to determine statistical optimality of global or pixel-wise onset estimation. ISMRM 2009 .
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2009). Novel method of portal delay and dispersion estimation for dual-input kinetic modelling of DCE-MRI liver data. ISMRM 2009 .
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Hawkes, D.J., Atkinson, D., Leach, M.O. (2009). Optimizing Functional Parameter Accuracy for Breath-hold DCE-MRI of Liver Tumours. PHYS MED BIOL, 54 (7), 2197-2215. doi:10.1088/0031-9155/54/7/023
Punwani, S., Halligan, S., Tolan, D., Taylor, S.A., Hawkes, D. (2009). Quantitative assessment of colonic movement between prone and supine patient positions during CT colonography.. BRIT J RADIOL, 82 (978), 475-481. doi:10.1259/bjr/91937173
Taylor, Z.A., Comas, O., Cheng, M., Passenger, J., Hawkes, D.J., Atkinson, D., Ourselin, S. (2009). On modelling of anisotropic viscoelasticity for soft tissue simulation: numerical solution and GPU execution.. MED IMAGE ANAL, 13 (2), 234-244. doi:10.1016/j.media.2008.10.001
White, M.J., Hawkes, D.J., Melbourne, A., Collins, D.J., Coolens, C., Hawkins, M., ...Atkinson, D. (2009). Motion artefact correction in free-breathing abdominal MRI using overlappingpartial samples to recover image deformations. MAGN RESON MED, 62 (2), 440-449. doi:10.1002/mrm.22017
Zhuang, X., Hawkes, D.J., Ourselin, S. (2009). Unifying encoding of spatial information in mutual information for nonrigid registration. 21st International Conference on Information Processing in Medical Imaging Coll William & Mary, Williamsburg, VA.INFORMATION PROCESSING IN MEDICAL IMAGING, PROCEEDINGS.5636.
Zhuang, X., Rhode, K., Razavi, R., Hawkes, D.J., Ourselin, S. (2009). Free-Form Deformations Using Adaptive Control Point Status for Whole Heart MR Segmentation. 5th International Conference on Functional Imaging and Modeling of the Heart Nice, FRANCE.FUNCTIONAL IMAGING AND MODELING OF THE HEART, PROCEEDINGS.5528.

2008

Barratt, D.C., Chan, C.S.K., Edwards, P.J., Penney, G.P., Slomczykowksy, M., Carter, T.J., Hawkes, D.J. (2008). Instantiation and registration of statistical shape models of the femur and pelvis using 3D ultrasound imaging. Medical Image Analysis, 12 (3), 358-374. doi:10.1016/j.media.2007.12.006
Barratt, D.C., Chan, C.S.K., Edwards, P.J., Penney, G.P., Slomczykowski, M., Carter, T.J., Hawkes, D.J. (2008). Instantiation and Registration of Statistical Shape Models of the Femur and Pelvis using 3D Ultrasound Imaging. MED IMAGE ANAL, 12 (3), 358-374. doi:10.1016/j.media.2007.12.006
Carter, T.J., Tanner, C., Barratt, D.C., Beechey-Newman, N., Hawkes, D.J. (2008). MR Navigated Breast Surgery: Method and Initial Clinical Experience. 11th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2008) New York, NY.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT II, PROCEEDINGS.5242.
Chandler, A.G., Pinder, R.J., Netsch, T., Schnabel, J.A., Hawkes, D.J., Hill, D.L.G., Razavi, R. (2008). Correction of misaligned slices in multi-slice cardiovascular magnetic resonance using slice-to-volume registration. J CARDIOVASC MAGN R, 10 doi:10.1186/1532-429X-10-13
Colgan, R., McClelland, J., McQuaid, D., Evans, P.M., Hawkes, D., Brock, J., ...Webb, S. (2008). Planning lung radiotherapy using 4D CT data and a motion model. PHYS MED BIOL, 53 (20), 5815-5830. doi:10.1088/0031-9155/53/20/017
Gao, G., Tarte, S., King, A., Ma, Y., Chinchapatnam, P., Schaeffter, T., ...Rhode, K. (2008). Validation of the use of photogrammetry to register preprocedure MR images to intra-procedure patient position for image-guided cardiac catheterization procedures - art. no. 69181Q. .MEDICAL IMAGING 2008: VISUALIZATION, IMAGE-GUIDED PROCEDURES, AND MODELING, PTS 1 AND 2.6918. doi:10.1117/12.770113.
Greenhalgh, R., Hu, Y., Barratt, D., Tolan, D., Taylor, S.A., Hawkes, D., Halligan, S. (2008). Can Us elastography help characterise anal sphincter pathology?. .European Radiology.18.
Hipwell, J., Tanner, C., Crum, W.R., Schnabel, J., Hawkes, D.J. (2008). A new validation method for validation of X-ray Mammogram Registration Algorithms using a Projection Model of Breast X-ray Compression. IEEE Transactions on Medical Imaging, 26 1190-1200. doi:10.1088/0031-9155/52/16/007
Hipwell, J., Tanner, C., Crum, W.R., Schnabel, J., Hawkes, D.J. (2008). A new validation method for validation of X-ray Mammogram Registration Algorithms using a Projection Model of Breast X-ray Compression. IEEE Transactions on Medical Imaging, 26 1190-1200. doi:10.1088/0031-9155/52/16/007
Hughes, S., McClelland, J., Chandler, A., Adams, M., Boutland, J., Withers, D., ...Hawkes, D. (2008). A comparison of internal target volume definition by limited four-dimensional computed tomography, the addition of patient-specific margins, or the addition of generic margins when planning radical radiotherapy for lymph node-positive non-small cell lung cancer. CLIN ONCOL-UK, 20 (4), 293-300. doi:10.1016/j.clon.2007.12.004
Hu, M., Penney, G., Rueckert, D., Edwards, P., Figl, M., Pratt, P., Hawkes, D. (2008). A novel algorithm for heart motion analysis based on geometric constraints.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT I, PROCEEDINGS, 5241 720-728.
Hu, Y., Morgan, D., Ahmed, H.U., Pendsé, D., Sahu, M., Allen, C., ...Barratt, D. (2008). A statistical motion model based on biomechanical simulations for data fusion during image-guided prostate interventions. 11th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2008) New York, NY.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT I, PROCEEDINGS.5241.
Hu, Y.P., Morgan, D., Ahmed, H.U., Pendse, D., Sahu, M., Allen, C., ...Barratt, D. (2008). Modelling prostate gland motion for image-guided interventions. 4th International Symposium on Biomedical Simulation Imperial Coll, London, ENGLAND.BIOMEDICAL SIMULATION, PROCEEDINGS.5104.
Kashani, R., Hub, M., Balter, J.M., Kessler, M.L., Dong, L., Zhang, L.F., ...Schnabel, J.A. (2008). Objective assessment of deformable image registration in radiotherapy: A multi-institution study. MED PHYS, 35 (12), 5944-5953. doi:10.1118/1.3013563
Mang, A., Schnabel, J.A., Crum, W.R., Modat, M., Camara-Rey, O., Palm, C., ...Buzug, T.M. (2008). Consistency of parametric registration in serial MRI studies of brain tumor progression. International Journal of Computer Assisted Radiology and Surgery, 3 (3-4), 201-211.
Melbourne, A., Atkinson, D., Hawkes, D.J. (2008). Influence of Organ Motion and Contrast Enhancement on Successful Registration. 11th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2008) New York, NY.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT II, PROCEEDINGS.5242.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2008). Non-Rigid Registration of Diffusion Weighted MRI using Progressive Principal Component Registration. ISMRM .
Miyazaki, K., Collins, D.J., Koh, D.-.M., Atkinson, D., Hawkes, D.J., Leach, M.O. (2008). Evaluation of quantitative dynamic contrast enhanced pharmacokinetic parameters with and without postprocessing. ISMRM .
Orton, M.R., Collins, D.J., Hawkes, D.J., Atkinson, D., Leach, M.O. (2008). Effect of Image Acquisition Protocol on Vascular Parameter Estimates from DCE-MRI Liver Data. ISMRM .
Orton, M.R., Collins, D.J., Walker-Samuel, S., d'Arcy, J.A., Hawkes, D.J., Atkinson, D., Leach, M.O. (2008). Bayesian estimation of pharmacokinetic parametersfor DCE-MRI with a robust treatment of enhancement onset time. Physics in Medicine and Biology, 52 (9), 2393-2408. doi:10.1088/0031-9155/52/9/005
Orton, M.R., d'Arcy, J.A., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2008). Portal Delay Estimation from DCE-MRI Liver Tissue Data: Feasibility and Effect on Vascular Parameter Estimates. ISMRM .
Orton, M.R., d'Arcy, J.A., Walker-Samuel, S., Hawkes, D.J., Atkinson, D., Collins, D.J., Leach, M.O. (2008). Computationally efficient vascular input function models for quantitative kinetic modelling using DCE-MRI. PHYS MED BIOL, 53 (5), 1225-1239. doi:10.1088/0031-9155/53/5/005
Palm, C., Penney, G.P., Crum, W.R., Schnabel, J.A., Pietrzyk, U., Hawkes, D.J. (2008). Fusion of rat brain histology and MRI using weighted multi-image mutual information - art. no. 69140M. Medical Imaging 2008 Conference San Diego, CA.MEDICAL IMAGING 2008: IMAGE PROCESSING, PTS 1-3.6914.
Penney, G.P., Griffin, L.D., King, A.P., Hawkes, D.J. (2008). A novel framework for multi-modal intensity-based similarity measures based on internal similarity. .Medical Imaging 2008: Image Processing.6914. doi:10.1117/12.769402.
Punwani, S., Robinson, C., Hawkes, D., Taylor, S.A., Halligan, S. (2008). Quantitative assessment of colonic movement between prone and supine patient positions during CTC. .European Radiology.18.
Silberberg, Y.R., Pelling, A.E., Yakubov, G.E., Crum, W.R., Hawkes, D.J., Horton, M.A. (2008). Tracking displacements of intracellular organelles in response to nanomechanical forces. 5th IEEE International Symposium on Biomedical Imaging - From Nano to Macro Paris, FRANCE.2008 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1-4.
Silberberg, Y.R., Pelling, A.E., Yakubov, G.E., Crum, W.R., Hawkes, D.J., Horton M, A. (2008). Mitochondrial displacements in response to nanomechanical forces. J MOL RECOGNIT, 21 (1), 30-36. doi:10.1002/jmr.868
Tanner, C., Hipwell, J.H., Hawkes, D.J. (2008). Statistical Deformation Models of Breast Compressions from Biomechanical Simulations. 9th International Workshop on Digital Mammography Tucson, AZ.DIGITAL MAMMOGRAPHY, PROCEEDINGS.5116.
Taylor, Z.A., Comas, O., Cheng, M., Passenger, J., Hawkes, D.J., Atkinson, D., Ourselin, S. (2008). Modelling anisotropic viscoelasticity for real-time soft tissue simulation. 11th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2008) New York, NY.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT I, PROCEEDINGS.5241.
Thompson, S.A., Penney, G.P., Hawkes, D.J., Dasgupta, P. (2008). Bone segmentation using a CT based statistical shape model for image guidance in robot assisted prostatectomy. Annual Meeting of the British-Association-of-Urological-Surgeons Manchester, ENGLAND.BJU INTERNATIONAL.101.
Thompson, S., Penney, G., Buie, D., Dasgupta, P., Hawkes, D. (2008). Use of a CT statistical deformation model for multi-modal pelvic bone segmentation.. .MEDICAL IMAGING 2008: IMAGE PROCESSING, PTS 1-3.6914. doi:10.1117/12.770254.
Thompson, S., Penney, G., Dasguipa, P., Hawkes, D. (2008). Image guidance in robot assisted radical prostatectomy. EUROPEAN UROLOGY SUPPLEMENTS, 7 (3), 104. doi:10.1016/S1569-9056(08)60134-7
Waechter, I., Barratt, D.C., Hawkes, D.J., Bredno, J., Weese, J. (2008). Quantifying blood flow division at bifurcations from rotational angiography. 5th IEEE International Symposium on Biomedical Imaging - From Nano to Macro Paris, FRANCE.2008 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1-4.
Waechter, I., Bredno, J., Hermans, R., Barratt, D., Weese, J., Hawkes, D. (2008). Evaluation of model-based blood flow quantification from rotational angiography. SPIE Medical Imaging .
Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Model-based blood flow quantification from rotational angiography.. MEDICAL IMAGE ANALYSIS, 12 (5), 586-602. doi:10.1016/j.media.2008.06.003
Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Evaluation of model-based blood flow quantification from rotational angiography - art. no. 691606. Medical Imaging 2008 Conference San Diego, CA.MEDICAL IMAGING 2008: PHYSIOLOGY, FUNCTION, AND STRUCTURE FROM MEDICAL IMAGES.6916.
Waechter, I., Bredno, J., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Using flow information to support 3D vessel reconstruction from rotational angiography.. MED PHYS, 35 (7), 3302-3316. doi:10.1118/1.2938729
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in free-breathing liver MRI. ISMRM .
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in freebreathing. ISMRM .
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in free-breathing liver MRI. .Int. Soc. Magnetic Resonance Med..
Zhuang, X., Hawkes, D.J., Crum, W.R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation. SPIE Medical Imaging .6914.
Zhuang, X., Hawkes, D.J., Crum, W.R., Boubertakh, R., Uribe, S., Atkinson, D., ...Hill, D.L.G. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation - art. no. 691408. Medical Imaging 2008 Conference San Diego, CA.MEDICAL IMAGING 2008: IMAGE PROCESSING, PTS 1-3.6914.
Zhuang, X., Hawkes, D.J., Crum, W.R., Boubertakh, R., Uribe, S., Atkinson, D., ...Hill, D.L.G. (2008). Robust Registration between Cardiac MRI Images and Atlas for Segmentation Propagation. Proceedings of SPIE Vol. 6914 Medical Imaging 2008: Image Processing .6914.
Zhuang, X., Rhode, K., Arridge, S., Razavi, R., Hill, D., Hawkes, D.J., Ourselin, S. (2008). An atlas-based segmentation propagation framework using locally affine registration – Application to automatic whole heart segmentation. 11th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2008) New York, NY.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT II, PROCEEDINGS.5242.

2007

Blackall, J., McClelland, J., Tarte, S., Miguel, M., Uribe, S., Schaeffter, T., Hawkes, D. (2007). MR-based 4d models of respiratory motion variability for use in adaptive RT of the lung. 9th Biennial Meeting on Physics and Radiation Technology for Clinical Radiotherapy Barcelona, SPAIN.RADIOTHERAPY AND ONCOLOGY.84.
Chinchapatnam, P., Rhode, K.S., King, A.P., Gao, G., Ma, Y., Schaeffter, T., ...Arridge, S.R. (2007). Anisotropic wave propagation and apparent conductivity estimation in a fast electrophysiological model: Application to XMR interventional imaging. 10th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007) Brisbane, AUSTRALIA.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2007, PT 1, PROCEEDINGS.4791.
Crum, W.R., Camara, O., Hawkes, D.J. (2007). Methods for inverting dense displacement fields: evaluation in brain image registration.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2007, PT 1, PROCEEDINGS, 4791 900-907.
Hawkes, D.J., Penney, G.P., Atkinson, D., Barratt, D., Blackall, J., Carter, T., ...S, W. (2007). MOTION AND BIOMECHANICAL MODELS FOR IMAGE GUIDED INTERVENTIONS. .ISBI. doi:10.1109/ISBI.2007.357021.
Hawkes, D., Nielsen, M. (2007). Untitled. MEDICAL IMAGE ANALYSIS, 11 (5), 415-416. doi:10.1016/j.media.2007.07.003
Hipwell, J.H., Tanner, C., Crum, W.R., Schnabel, J.A., Hawkes, D.J. (2007). A new validation method for validation of x-ray mammogram registration algorithms using a projection model of breast x-ray compression. IEEE T MED IMAGING, 26 (9), 1190-1200. doi:10.1109/TMI.2007.903569
Hu, M.X. (2007). 3D Reconstruction of Internal Organ Surfaces for Minimal Invasive Surgery. .Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention.10.
Kashani, R., Baiter, J., Kessler, M., Hub, M., Dong, L., Zhang, L., ...Schnabel, J. (2007). Objective assessment of deformable image registration in radiotherapy - a multi-institution study. 49th Annual Meeting of the American-Association-of-Physicists-in-Medicine Minneapolis, MN.MEDICAL PHYSICS.34.
McClelland, J., Blackall, J., Tarte, S., Hughes, S., Hawkes, D. (2007). Non-rigid registration based respiratory motion models of the lung using two parameters. 49th Annual Meeting of the American-Association-of-Physicists-in-Medicine Minneapolis, MN.MEDICAL PHYSICS.34.
McClelland, J.R., Webb, S., McQuaid, D., Binnie, D.M., Hawkes, D.J. (2007). Tracking 'differential organ motion' with a 'breathing' multileaf collimator: magnitude of problem assessed using 4D CT data and a motion-compensation strategy. PHYS MED BIOL, 52 (16), 4805-4826. doi:10.1088/0031-9155/52/16/007
Melbourne, A., Atkinson, D., White, M.J., Collins, M., Leach, M., Hawkes, D. (2007). Registration of dynamic contrast-enhanced MRI using a progressive principal component registration (PPCR). PHYS MED BIOL, 52 (17), 5147-5156. doi:10.1088/0031-9155/52/17/003
Melbourne, A., Atkinson, D., White, M.J., Hawkes, D.J., Collins, D., Leach, M. (2007). Contrast-enhancement simulation using principal components for registration of Dynamic Contrast-Enhanced MRI. ISMRM .
Melbourne, A., Atkinson, D., White, M.J., Hawkes, D.J., Collins, D., Leach, M. (2007). Using Registration to Quantify the Consistency of Whole Liver Position during Patient Breath-hold in Dynamic Contrast-Enhanced MRI. Proc ISMRM .
Miyazaki, K., d'Arcy, J.A., Atkinson, D., Hawkes, D., Koh, D.-.M., Leach, M.O., Collins, D.J. (2007). Correcting Artifacts in High Temporal- and Spatial-Resolution Dynamic Abdominal Studies Using UNFOLD: A Potential Tool for Improving Perfusion Quantification of DCE-MR Investigations. ISMRM .
Orton, M.R., Collins, D.J., Walker-Samuel, S., d'Arcy, J.A., Hawkes, D.J., Atkinson, D., Leach, M.O. (2007). Bayesian estimation of pharmacokinetic parameters for DCE-MRI with a robust treatment of enhancement onset time.. PHYS MED BIOL, 52 (9), 2393-2408. doi:10.1088/0031-9155/52/9/005
Orton, M.R., Collins, D.J., Walker-Samuel, S., d'Arcy, J.A., Hawkes, D.J., Atkinson, D., Leach, M.O. (2007). Bayesian estimation of pharmacokinetic parametersfor DCE-MRI with a robust treatment of enhancement onset time. Physics in Medicine and Biology, 52 (9), 2379-2391. doi:10.1088/0031-9155/52/9/004
Penney, G.P., Edwards, P.J., Hipwell, J.H., Slomczykowski, M., Revie, I., Hawkes, D.J. (2007). Postoperative calculation of acetabular cup position using 2-D-3-D registration. IEEE T BIO-MED ENG, 54 (7), 1342-1348. doi:10.1109/TBME.2007.890737
Tanner, C., Schnabel, J.A., Degenhard, A., Hall-Craggs, M.A., Usiskin, S.I., Leach, M.O., ...Hawkes, D.J. (2007). Quantitative evaluation of free-form deformation registration for dynamic contrast-enhanced MR mammography.. MED PHYS, 34 (4), 1221-1233. doi:10.1118/1.2712040
Waechter, I., Bredno, J., Barratt, D., Weese, J., Hawkes, D. (2007). Quantification of Blood Flow from Rotational Angiography. 10th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007) Brisbane, AUSTRALIA.Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, Pt 1, Proceedings.4791.
Webb, S., McClelland, J., Hawkes, D., Binnie, D. (2007). Tracking "Differential Organ Motion" with a "Breathing" multileaf collimator: Magnitude of problem assessed using 4D CT data and a motion-compensation strategy. 9th Biennial Meeting on Physics and Radiation Technology for Clinical Radiotherapy Barcelona, SPAIN.RADIOTHERAPY AND ONCOLOGY.84.
White, M.J., Atkinson, D., Batchelor, P.G., Crum, W.R., Uribe, S., Schaeffter, T., ...Hawkes, D.J. (2007). Reducing Artefacts by Inverting the Effects of Non-Rigid Motion During a Free-Breathing Liver Scan. ISMRM .
White, M.J., Atkinson, D., Crum, W.R., Uribe, S., Schaeffler, T., Collins, D., ...Hawkes, D.J. (2007). Reducing artefacts by inverting the effects of non-rigid motion during a free-breathing liver scan. .Int. Soc. Magnetic Resonance Med..

2006

Ahmad, S., Tarte, S., Withers, D., Hawkes, D., Blackall, J., Landau, D., ...Adams, M. (2006). Comparison of patient-specific and generic internal target volume (ITV) margins for planning radical radiotherapy in lymph-node positive non-small cell lung cancer (NSCLC). 25th Congress of the European-Society-for-Therapeutic-Radiology-and-Oncology Leipzig, GERMANY.RADIOTHERAPY AND ONCOLOGY.81.
Barratt, D.C., Penney, G.P., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2006). Self-Calibrating 3D-Ultrasound-Based Bone Registration for Minimally Invasive Orthopaedic Surgery. IEEE T MED IMAGING, 25 (3), 312-323. doi:10.1109/TMI.2005.862736
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Ultrasound-based registration for minimally-invasive orthopaedic surgery. .Presentations by Britain's Top Younger Scientists, Engineers and Technologists at The House of Commons.
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Recent Developments in Ultrasound-based Bone Registration. 6th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery .
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Recent Developments in Ultrasound-based Bone Registration. Computer Assisted Orthopaedic Surgery: 6th Annual Meeting of CAOS International .
Blackall, J., Ahmad, S., Miquel, M., McClelland, J., Landau, D., Hawkes, D. (2006). MRI-Based Measurements of Respiratory Motion Variability and Assessment of Imaging Strategies for Radiotherapy Planning. Physics in Medicine and Biology, 51 (17), 4147-4169.
Blackall, J.M., Ahmad, S., Miquel, M.E., McClelland, J.R., Landau, D.B., Hawkes, D.J. (2006). MRI-based measurements of respiratory motion variability and assessment of imaging strategies for radiotherapy planning. PHYS MED BIOL, 51 (17), 4147-4169. doi:10.1088/0031-9155/51/17/003
Carter, T.J., Tanner, C., Crum, W.R., Hawkes, D.J. (2006). Prone-Supine Breast MR Image Registration for Image-Guided Surgery. Medical Image Understanding and Analysis - MIUA 2006 .
Carter, T.J., Tanner, C.C., W R, B.-.N., N, H., D, J. (2006). A Framework for Image-Guided Breast Surgery. 3rd International Workshop on Medical Imaging and Augmented Reality (MIAR 2006) Shanghai, PEOPLES R CHINA.MEDICAL IMAGING AND AUGMENTED REALITY.4091.
Chandler, A.G., Pinder, R.J., Netsch, T., Schnabel, J.A., Hawkes, D.J., Hill, D.L.G., ......I.E.E.E. (2006). Correction of misaligned slices in multi-slice MR cardiac examinations by using slice-to-volume registration. .2006 3RD IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1-3.
Hipwell, J.H., Tanner, C., Crum, W.R., Hawkes, D.J. (2006). X-ray mammogram registration: A novel validation method. 8th International Workshop on Digital Mammography Manchester, ENGLAND.DIGITAL MAMMOGRAPHY, PROCEEDINGS.4046.
McClelland, J., Blackall, J., Tarte, S., Chandler, A., Hughes, S., Ahmad, S., ...Hawkes, D. (2006). A Continuous 4D Motion Model from Multiple Respiratory Cycles for use in Lung Radiotherapy. Medical Physics, 33 (9), 3348. doi:10.1118/1.2222079
McClelland, J., Hughes, S., Ahmad, S., Chandler, A., Blackall, J., Tarte, S., ...Hawkes, D. (2006). Comparing breathhold and free breathing CT derived motion models for predicting respiratory motion of lung cancer and lymph nodes. 25th Congress of the European-Society-for-Therapeutic-Radiology-and-Oncology Leipzig, GERMANY.RADIOTHERAPY AND ONCOLOGY.81.
McClelland, J.R., Blackall, J.M., Tarte, S., Chandler, A.C., Hughes, S., Ahmad, S., ...Hawkes, D.J. (2006). A continuous 4D motion model from multiple respiratory cycles for use in lung radiotherapy. MED PHYS, 33 (9), 3348-3358. doi:10.1118/1.2222079
Miyazaki, K., Walker-Samual, S., Knowles, B.R., Taylor, N.J., Padhani, A.R., Wallace, T., ...Atkinson, D. (2006). Parametric DCE-MRI HPI Maps - A Qualitative and Quantitative Analysis in Phase I Clinical Trial Patients with Liver Metastases. Proceedings of the ISMRM, 2006. .
Papastavrou, Y., Hutton, B., Hawkes, D. (2006). Non-rigid registration of combned PET-CT jhead and neck images to place the information within a common anatomical framework.. .EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING.33.
Penney, G.P., Barratt, B.C., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2006). Cadaver Validation of intensity-based ultrasound to CT registration. MED IMAGE ANAL, 10 (3), 385-395. doi:10.1016/j.media.2006.01.003
Tanner, C., Carter, T.J., Hawkes, D.J. (2006). 3D Rezoning for Finite Element Modelling of Large Breast Deformations. European Modelling Symposium .
Tanner, C., Khazen, M., Kessar, P., Leach, M.O., Hawkes, D.J. (2006). Does Registration Improve the Performance of a Computer Aided Diagnosis System for Dynamic Contrast-Enhanced MR Mammography?. IEEE International Symposium on Biomedical Imaging .
Tanner, C., Schnabel, J.A., Leach, M.O., Hose, D.R., Hill, D.L.G., Hawkes, D.J. (2006). Factors Influencing the Accuracy of Biomechanical Breast Models.. MED PHYS, 33 (6), 1758-1769. doi:10.1118/1.2198315
Tarte, S., McClelland, J., Hughes, S., Blackall, J., Landau, D., Hawkes, D. (2006). A non-contact method for the acquisition of breathing signals that enable distinction between abdominal and thoracic breathing. 25th Congress of the European-Society-for-Therapeutic-Radiology-and-Oncology Leipzig, GERMANY.RADIOTHERAPY AND ONCOLOGY.81.
Waechter, I., Bredno, J., Weese, J., Hawkes, D. (2006). Using flow information to support 3D vessel reconstruction from rotational angiography. .MEDICAL PHYSICS.33. doi:10.1118/1.2240122.
White, M.J., Atkinson, D., Collins, D., Leach, M.O., Hawkes, D.J. (2006). Parameterized modelling of liver deformation during free. ESMRMB .

2005

Ahmad, S., McClelland, J., Chandler, A., Blackall, J., Hughes, S., Hawkes, D. (2005). Movement of tumour and mediastinal lymph nodes with respiration in patients with non small cell lung cancer (NSCLC). 8th Biennial Meeting on Physics and Radiation Technology for Clinical Radiotherapy Lisbon, PORTUGAL.RADIOTHERAPY AND ONCOLOGY.76.
Ahmad, S., McClelland, J., Chandler, A., Blackall, J., Landau, D., Hawkes, D. (2005). The implementation of 4D CT using a novel respiratory motion modelling technique to aid radiotherapy planning in patients with non-small cell lung cancer. 11th World Conference on Lung Cancer Barcelona, SPAIN.LUNG CANCER.49.
Aylward, S.R., Cleary, K.R., Hawkes, D.J. (2005). Intraoperative image processing for surgical guidance. IEEE T MED IMAGING, 24 (11), 1401-1404. doi:10.1109/TMI.2005.859232
Barratt, D.C., Penney, G.P., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2005). Self-calibrating ultrasound-to-CT bone registration.
Blackall, J.M., Penney, G.P., King, A.P., Hawkes, D.J. (2005). Alignment of sparse freehand 3-D ultrasound with preoperative images of the liver using models of respiratory motion and deformation. IEEE T MED IMAGING, 24 (11), 1405-1416. doi:10.1109/TMI.2005.856751
Blackall, J.M., Penney, G.P., King, A.P., Hawkes, D.J. (2005). Alignment of Sparse Freehand 3D Ultrasound with Preoperative Images of the Liver and an Interventional Plan Using Models of Respiratory Motion and Deformation. IEEE Transactions on Medical Imaging, 24 1405-1416.
Carter, T.J., Sermesant, M., Cash, D.M., Barratt, D.C., Tanner, C., Hawkes, D.J. (2005). Application of soft tissue modelling to image-guided surgery. MED ENG PHYS, 27 (10), 893-909. doi:10.1016/j.medengphy.2005.10.005
Crum, W.R., Tanner, C., Hawkes, D.J. (2005). Anisotropic multi-scale fluid registration: evaluation in magnetic resonance breast imaging. PHYS MED BIOL, 50 (21), 5153-5174. doi:10.1088/0031-9155/50/21/014
Edwards, P.J., Nijmeh, A.D., McGurk, M., Odell, E., Fenlon, M.R., Marsden, P.K., Hawkes, D.J. (2005). Validation of PET imaging by alignment to histology slices. 8th International Conference on Medical Image Computing and Computer-Assisted Intervention Palm Springs, CA.MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2005, PT 2.3750.
Hawkes, D., Barratt, D., Blackall, J., Chandler, A., McClelland, J., Penney, G. (2005). Computational models in image guided interventions.. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 7 7246-7249. doi:10.1109/iembs.2005.1616183
Hawkes, D.J., Barratt, D., Blackall, J.M., Chan, C., Edwards, P.J., Rhode, K., ...Hill, D.L. (2005). Tissue deformation and shape models in image-guided interventions: a discussion paper. MEDICAL IMAGE ANALYSIS, 9 (2), 163-175. doi:10.1016/j.media.2004.11.007
Manzke, R., Koken, P., Hawkes, D., Grass, M. (2005). Helical cardiac cone beam CT reconstruction with large area detectors: a simulation study.. PHYSICS IN MEDICINE AND BIOLOGY, 50 (7), 1547-1568. doi:10.1088/0031-9155/50/7/016
McClelland, J., Blackall, J., Hughes, S., Ahmad, S., Landau, D., Hawkes, D. (2005). 4D models of respiratory motion for use in RT planning and their advantages over 4DCT techniques. 8th Biennial Meeting on Physics and Radiation Technology for Clinical Radiotherapy Lisbon, PORTUGAL.RADIOTHERAPY AND ONCOLOGY.76.
McLaughlin, R.A., Hipwell, J., Hawkes, D.J., Noble, J.A., Byrne, J.V., Cox, T.C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE T MED IMAGING, 24 (8), 1058-1066. doi:10.1109/TMI.2005.852067
McLaughlin, R.A., Hipwell, J., Hawkes, D.J., Noble, J.A., Byrne, J.V., Cox, T.C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE TRANS MED IMAGING, 24 (278-0062 (Print), 8), 1058-1066.
Nijmeh, A.D., Goodger, N.M., Hawkes, D., Edwards, P.J., McGurk, M. (2005). Image-guided navigation in oral and maxillofacial surgery.. The British journal of oral & maxillofacial surgery, 43 (4), 294-302. doi:10.1016/j.bjoms.2004.11.018
Panalkis, N., McClelland, J., Chandler, A., Blackall, J., Ahmad, S., Hughes, S., ...Brada, M. (2005). Intrafractional movement of the oesophagus in patients with Non-Small Cell Lung Cancer (NSCLC). EJC SUPPL, 3 (2), 339-340.
Penney, G.P., Barratt, D.C., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2005). Cadaver validation of intensity-based ultrasound-to-CT registration.
Rhode, K.S., Lambrou, T., Hawkes, D.J., Seifalian, A.M. (2005). Novel approaches to the measurement of arterial blood flow from dynamic digital X-ray images. IEEE T MED IMAGING, 24 (4), 500-513. doi:10.1109/TMI.2004.843202

2004

Byrne, J.V., Colominas, C., Hipwell, J., Cox, T., Noble, J.A., Penney, G.P., Hawkes, D.J. (2004). Assessment of a technique for 2D-3D registration of cerebral intra-arterial angiography. BR J RADIOL, 77 (007-1285 (Print), 914), 123-128.
Chan, C.S.K., Barratt, D.C., Edwards, P.J., Slomczykowski, M., Carter, T.J., Hawkes, D.J. (2004). Cadaver validation of the use of ultrasound for the instantiation of bony anatomy in image-guided orthopaedic surgery.
Chan, C.S.K., Edwards, P.J., Barratt, D.C., Slomczykowski, M., Hawkes, D.J. (2004). Ultrasound-based reconstruction and registration of 3D bone anatomy using statistical shape. 4th Annual Meeting of CAOS International .Computer Assisted Surgery - 4th Annual Meeting of CAOS-International Proceedings.
Chandler, A.G., Schnabel, J.A., Hawkes, D.J., Netsch, T., Cocosco, C.A. (2004). Slice-to-volume registration using mutual information between probabilistic image classifications. .Proceedings of SPIE.5370. doi:10.1117/12.534966.
de Cunha, D.A., Eadie, L.H., Barbur, J.L., Hawkes, D.J., Seifalian, A.M. (2004). The effect of image colour distortion on evaluation of donor liver suitability for transplantation. COMPUT BIOL MED, 34 (7), 615-632. doi:10.1016/j.combiomed.2003.10.001
Edwards, P.J., Johnson, L.G., Hawkes, D.J., Fenlon, M.R., Strong, A.J., Gleeson, M.J. (2004). Clinical experience and perception in stereo augmented reality surgical navigation. .MEDICAL IMAGING AND AUGMENTED REALITY, PROCEEDINGS.3150.
Johnson, L.G., Edwards, P.J., Griffin, L.D., Hawkes, D.J. (2004). Depth perception of stereo overlays in image-guided surgery. Medical Imaging 2004: Image Perception, Observer Performance, and Technology Assessment, 263-272.
Manzke, R., Grass, M., Hawkes, D. (2004). Artifact analysis and reconstruction improvement in helical cardiac cone beam CT.. IEEE Transactions on Medical Imaging, 23 (9), 1150-1164. doi:10.1109/TMI.2004.830804
Manzke, R., Kohler, T., Nielsen, T., Hawkes, D., Grass, M. (2004). Automatic phase determination for retrospectively gated cardiac CT.. MEDICAL PHYSICS, 31 (12), 3345-3362. doi:10.1118/1.1791351
Penney, G.P., Blackall, J.M., Hamady, M.S., Sabharwal, T., Adam, A., Hawkes, D.J. (2004). Registration of freehand 3D ultrasound and magnetic resonance liver images. Medical Image Analysis, 8 (1), 81-91. doi:10.1016/j.media.2003.07.003
Schnabel, J.A., Batchelor, P.G., Tanner, C., Quist, M., Gerritsen, F.A., Hawkes, D.J. (2004). Modelling tissue deformations using free-form modes of vibration. Medical Image Understanding and Analysis (MIUA) .
Tanner, C., Khazen, M., Kessar, P., Leach, M.O., Hawkes, D.J. (2004). Classification Improvement by Segmentation Refinement: Application to Contrast-Enhanced MR-Mammography. .MICCAI (1).3216. doi:10.1007/978-3-540-30135-6_23.

2003

Crum, W.R., Griffin, L.D., Hill, D.L., Hawkes, D.J. (2003). Zen and the art of medical image registration: correspondence, homology, and quality. NeuroImage, 20 (3), 1425-1437. doi:10.1016/j.neuroimage.2003.07.014
Crum, W.R., Hill, D.L., Hawkes, D.J. (2003). Information theoretic similarity measures in non-rigid registration. INF PROCESS MED IMAGING, 18 (011-2499 (Print)), 378-387.
Hartkens, T., Hill, D.L., Castellano-Smith, A.D., Hawkes, D.J., Maurer, C.R., Jr, M., ...C, L. (2003). Measurement and analysis of brain deformation during neurosurgery. IEEE Transactions on Medical Imaging, 22 (1), 82-92. doi:10.1109/TMI.2002.806596
Hawkes, D.J., Hill, D.L. (2003). Medical imaging at Guy's Hospital, King's College London. IEEE TRANS MED IMAGING, 22 (278-0062 (Print), 9), 1033-1041.
Hipwell, J.H., Penney, G.P., McLaughlin, R.A., Rhode, K., Summers, P., Cox, T.C., ...Hawkes, D.J. (2003). Intensity-based 2-D-3-D registration of cerebral angiograms. IEEE T MED IMAGING, 22 (11), 1417-1426. doi:10.1109/TMI.2003.819283
Johnson, L.G., Edwards, P., Hawkes, D. (2003). Surface transparency makes stereo overlays unpredictable: the implications for augmented reality.. Studies in health technology and informatics, 94 131-136.
Johnson, L.G., Edwards, P.J., Barratt, D.C., Hawkes, D.J. (2003). The problem of perceiving accurate depth information through a surgical augmented reality system. 1st International Symposium on Computer Aided Surgery around the Head (CAS-H) .Proceedings of the 1st International Symposium on Computer Aided Surgery around the Head.
Manzke, R., Grass, M., Nielsen, T., Shechter, G., Hawkes, D. (2003). Adaptive temporal resolution optimization in helical cardiac cone beam CT reconstruction. MEDICAL PHYSICS, 30 (12), 3072-3080. doi:10.1118/1.1624756
Noble, N.M., Hill, D.L., Breeuwer, M., Schnabel, J.A., Hawkes, D.J., Gerritsen, F.A., Razavi, R. (2003). Myocardial delineation via registration in a polar coordinate system. Academic Radiology, 10 (12), 1349-1358. doi:10.1016/S1076-6332(03)00537-3
Razavi, R., Hill, D.L., Keevil, S.F., Miquel, M.E., Muthurangu, V., Hegde, S., ...Hawkes, D.J. (2003). Cardiac catheterisation guided by MRI in children and adults with congenital heart disease. LANCET, 362 (9399), 1877-1882.
Tanner, C., Schnabel, J.A., Castellano-Smith, A.D., Degenhard, A., Leach, M.O., Hose, D.R., ...Hawkes, D.J. (2003). Validation of nonrigid image registration using finite-element methods: application to breast MR images. IEEE transactions on medical imaging, 22 (2), 238-247. doi:10.1109/tmi.2002.808367

2002

Batchelor, P.G., Castellano Smith, A.D., Hill, D.L., Hawkes, D.J., Cox, T.C., Dean, A.F. (2002). Measures of folding applied to the development of the human fetal brain.. IEEE transactions on medical imaging, 21 (8), 953-965. doi:10.1109/tmi.2002.803108
Degenhard, A., Tanner, C., Hayes, C., Hawkes, D.J., Leach, M.O. (2002). Comparison between radiological and artificial neural network diagnosis in clinical screening. Physiological Measurement, 23 (4), 727-739. doi:10.1088/0967-3334/23/4/311
Hawkes, D.J., Spendley, D.G., Alfaham, M. (2002). Hypothesis waiting for proof: unwrapping neonates for transfer. ARCH DIS CHILD FETAL NEONATAL ED, 87 (359-2998 (Print), 3), F232-.
Jannin, P., Fitzpatrick, J.M., Hawkes, D.J., Pennec, X., Shahidi, R., Vannier, M.W. (2002). Validation of medical image processing in image-guided therapy. IEEE TRANS MED IMAGING, 21 (278-0062 (Print), 12), 1445-1449.
Penney, G.P., Little, J.A., Weese, J., Hill, D.L., Hawkes, D.J. (2002). Deforming a preoperative volume to represent the intraoperative scene. COMPUT AIDED SURG, 7 (092-9088 (Print), 2), 63-73.
Penney, G.P., Little, J.A., Weese, J., Hill, D.L., Hawkes, D.J. (2002). Deforming a preoperative volume to represent the intraoperative scene.. Computer aided surgery : official journal of the International Society for Computer Aided Surgery, 7 (2), 63-73. doi:10.1002/igs.10034
Tanner, C., Schnabel, J.A., Castellano-Smith, A.D., Sonoda, L.I., Hill, D.L., Hawkes, D.J., ...Hose, D.R. (2002). Comparison of biomechanical breast models: a case study. .Proceedings of SPIE.4684. doi:10.1117/12.467155.
Tanner, C., Schnabel, J.A., Degenhard, A., Castellano-Smith, A.D., Hayes, C., Leach, M.O., ...Hawkes, D.J. (2002). Validation of volume-preserving non-rigid registration: Application to contrast-Enhanced MR-mammography. .Medical Image Computing and Computer-Assisted Intervention - MICCAI 2002: 5th International Conference Tokyo, Japan, September 25–28, 2002: Proceedings, Part I.2488. doi:10.1007/3-540-45786-0_38.

2001

Clarkson, M.J., Rueckert, D., Hill, D.L.G., Hawkes, D.J. (2001). Using photo-consistency to register 2D optical images of the human face to a 3D surface model.. IEEE Transactions on Pattern Analysis and Machine Intelligence, 23 (11), 1266-1280. doi:10.1109/34.969117
Degenhard, A., Tanner, C., Hayes, C., Hawkes, D.J., Leach, M.O. (2001). Pre-processed image reconstruction applied to breast and brain MR imaging. Physiological Measurement, 22 (3), 589-604. doi:10.1088/0967-3334/22/3/315
Edwards, P.J., Hawkes, D.J., Penney, G.P., Clarkson, M.J. (2001). Guiding Therapeutic Proceedures. In Hajnal, J.V., Hill, D.L.G., Hawkes, D.J. (Eds.), Medical Image Registration. (pp. 253-278). CRC.
Hill, D.L., Batchelor, P.G., Holden, M., Hawkes, D.J. (2001). Medical image registration. PHYS MED BIOL, 46 (031-9155 (Print), 3), R1-45.
Hill, D.L., Batchelor, P.G., Holden, M., Hawkes, D.J. (2001). Medical image registration.. Physics in medicine and biology, 46 (3), R1-45. doi:10.1088/0031-9155/46/3/201
Hill, D.L.G., Batchelor, P.G. (2001). Registration Methodology-Algorithms,. In Hajnal, J., Hill, D.L.G., Hawkes, D. (Eds.), Medical Image Registration,. CRC.
King, A.P., Batchelor, P.G., Penney, G.P., Blackall, J.M., Hill, D.L.G., Hawkes, D.J. (2001). Estimating Sparse Deformation Fields Using Multiscale Bayesian Priors and 3-D Ultrasound. IPMI .
Penney, G.P., Batchelor, P.G., Hill, D.L., Hawkes, D.J., Weese, J. (2001). Validation of a two- to three-dimensional registration algorithm for aligning preoperative CT images and intraoperative fluoroscopy images. MED PHYS, 28 (094-2405 (Print), 6), 1024-1032.
Penney, G.P., Batchelor, P.G., Hill, D.L., Hawkes, D.J., Weese, J. (2001). Validation of a two- to three-dimensional registration algorithm for aligning preoperative CT images and intraoperative fluoroscopy images.. Medical physics, 28 (6), 1024-1032. doi:10.1118/1.1373400
Penney, G.P., Edwards, P.J., King, A.P., Blackall, J.M., Batchelor, P.G., Hawkes, D.J. (2001). Stochastic Iterative Closest Point Algorithm (stochastICP). MICCAI .
Tanner, C., Degenhard, A., Schnabel, J.A., Smith, A.C., Hayes, C., Sonoda, L.I., ...Hawkes, D.J. (2001). A method for the comparison of biomechanical breast models. .IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, MMBIA 2001. doi:10.1109/MMBIA.2001.991694.

2000

Castellano Smith, A.D., Batchelor, P.G., Hill, D.L.G., Dean, A.D., Cox, T., Hawkes, D.J. (2000). The Shape of the Developing Foetal Cortex from MR Images. ISMRM .
Castellano Smith, A.D., Batchelor, P.G., Hill, D.L.G., Dean, A.D., Cox, T., Hawkes, D.J. (2000). he Shape of the Developing Foetal Cortex from MR Images. MIUA .
Edwards, P.J., King, A.P., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Strong, A.J. (2000). Design and evaluation of a system for microscope-assisted guided interventions (MAGI). IEEE TRANSACTIONS ON MEDICAL IMAGING, 19 (11), 1082-1093. doi:10.1109/42.896784
Hawkes, D.J., Rueckert, D., Clarkson, M.J. (2000). Method of 3D/2D Registration of optical views to a surface model. WO0159708 (A1).
Hill, D.L., Smith, A.D., Simmons, A., Maurer, C.R., Jr, C., T C, E., ...C, E. (2000). Sources of error in comparing functional magnetic resonance imaging and invasive electrophysiological recordings. Journal of neurosurgery, 93 (2), 214-223. doi:10.3171/jns.2000.93.2.0214
Holden, M., Hill, D.L., Denton, E.R., Jarosz, J.M., Cox, T.C., Rohlfing, T., ...Hawkes, D.J. (2000). Voxel similarity measures for 3-D serial MR brain image registration. IEEE T MED IMAGING, 19 (2), 94-102.
Tanner, C., Schnabel, A., Chung, D., Clarkson, M.J., Rueckert, D., Hill, D.L.G., Hawkes, D.J. (2000). Volume and shape preservation of enhancing lesions when applying non-rigid registration to a time series of contrast enhancing MR breast images. Medical Image Computing and Computer-Assisted Intervention .LNCS.1935.

1999

Denton, E.R., Sonoda, L.I., Rueckert, D., Rankin, S.C., Hayes, C., Leach, M.O., ...Hawkes, D.J. (1999). Comparison and evaluation of rigid, affine, and nonrigid registration of breast MR images. J COMPUT ASSIST TOMOGR, 23 (363-8715 (Print), 5), 800-805.
Edwards, P.J., King, A.P., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Strong, A.J. (1999). Design and evaluation of a system for microscope-assisted guided interventions (MAGI). .MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, MICCAI'99, PROCEEDINGS.1679.
Holden, M., Hill, D.L.G., Denton, E.R.E., Jarosz, J.M., Cox, T.C.S., Hawkes, D.J. (1999). Voxel similarity measures for 3D serial MR brain image registration. 16th International Conference on Information Processing in Medical Imaging (IPMI 99) VISEGRAD, HUNGARY.INFORMATION PROCESSING IN MEDICAL IMAGING, PROCEEDINGS.1613.
King, A.P., Edwards, P.J., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Fenlon, M.R. (1999). A system for microscope-assisted guided interventions. .STEREOTACTIC AND FUNCTIONAL NEUROSURGERY.72. doi:10.1159/000029708.
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J. (1999). Nonrigid registration using free-form deformations: application to breast MR images. IEEE TRANS MED IMAGING, 18 (278-0062 (Print), 8), 712-721.
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J. (1999). Nonrigid registration using free-form deformations: application to breast MR images.. IEEE transactions on medical imaging, 18 (8), 712-721. doi:10.1109/42.796284
Ruff, C.F., Hughes, S.W., Hawkes, D.J. (1999). Volume Estimation from Sparse Planar Images using Deformable Models. IMAGE AND VISION COMPUTING, 17 (8), 559-565.
Studholme, C., Hill, D.L.G., Hawkes, D.J. (1999). An overlap invariant entropy measure of 3D medical image alignment .. Pattern Recognition, 32 (1), 71-86. doi:10.1016/S0031-3203(98)00091-0

1998

Dorward, N.L., Alberti, O., Zhao, J., Dijkstra, A., Buurman, J., Palmer, J.D., ...Thomas, D.G.T. (1998). Interactive image-guided neuroendoscopy: Development and early clinical experience. MINIM INVAS NEUROSUR, 41 (1), 31-34.
Edwards, P.J., Hill, D.L., Little, J.A., Hawkes, D.J. (1998). A three-component deformation model for image-guided surgery. Medical image analysis, 2 (4), 355-367. doi:10.1016/s1361-8415(98)80016-9
Fleig, O.J., Edwards, P.J., Chandra, S., Stuttler, H., Hawkes, D.J. (1998). Automated microscope calibration for image guided surgery. .CAR '98 - COMPUTER ASSISTED RADIOLOGY AND SURGERY.1165.
Hawkes, D.J. (1998). Algorithms for radiological image registration and their clinical application. Journal of anatomy, 193 ( Pt 3) 347-361. doi:10.1046/j.1469-7580.1998.19330347.x
Hill, D.L., Maurer, C.R., Jr, S., C, F., J M, H., D, J. (1998). Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm. J COMPUT ASSIST TOMOGR, 22 (363-8715 (Print), 2), 317-323.
Hill, D.L., Maurer, C.R., Studholme, C., Fitzpatrick, J.M., Hawkes, D.J. (1998). Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm.. Journal of computer assisted tomography, 22 (2), 317-323. doi:10.1097/00004728-199803000-00031
Maurer, C.R., Jr, H., D L, M., A J, L., H, M., M, R., ...R E, H. (1998). Investigation of intraoperative brain deformation using a 1.5-T interventional MR system: preliminary results. IEEE TRANS MED IMAGING, 17 (278-0062 (Print), 5), 817-825.
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L.G., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2-D-3-D medical image registration. IEEE TRANSACTIONS ON MEDICAL IMAGING, 17 (4), 586-595. doi:10.1109/42.730403
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L.G., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2D-3D medical image registration. .MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI'98.1496.
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2-D-3-D medical image registration. IEEE TRANS MED IMAGING, 17 (278-0062 (Print), 4), 586-595.
Rueckert, D., Hayes, C., Studholme, C., Summers, P., Leach, M., Hawkes, D.J. (1998). Non-rigid registration of breast MR images using mutual information. .MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI'98.1496.
Smith, A.D.C., Hill, D.L.G., Hawkes, D.J., Polkey, C.E., Cox, T.C.S. (1998). Surface simplification for shape measurement - application to the human brain.. .MEDICAL IMAGING 1998: IMAGE PROCESSING, PTS 1 AND 2.3338. doi:10.1117/12.310943.

1997

Edwards, P.J., Hill, D.L.G., Little, J.A., Hawkes, D.J. (1997). Deformation for image guided interventions using a three component tissue model. .INFORMATION PROCESSING IN MEDICAL IMAGING.1230.
Hill, D.L., Langsaeter, L.A., Poynter-Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., ...Gleeson, M.J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy. COMPUT AIDED SURG, 2 (092-9088 (Print), 5), 264-275.
Hill, D.L., Langsaeter, L.A., Poynter-Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., ...Gleeson, M.J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy.. Computer aided surgery : official journal of the International Society for Computer Aided Surgery, 2 (5), 264-275. doi:10.1002/(sici)1097-0150(1997)2:5<264::aid-igs2>3.0.co;2-y
Little, J.A., Hawkes, D.J. (1997). The registration of multiple medical images acquired from a single subject: why, how, what next?. Statistical methods in medical research, 6 (3), 239-265. doi:10.1191/096228097666468281
Little, J.A., Hill, D.L.G., Hawkes, D.J. (1997). Deformations incorporating rigid structures .. Computer Vision Image Understanding, 66 (2), 223-232.
Studholme, C., Hill, D.L., Hawkes, D.J. (1997). Automated three-dimensional registration of magnetic resonance and positron emission tomography brain images by multiresolution optimization of voxel similarity measures. MED PHYS, 24 (094-2405 (Print), 1), 25-35.
Summers, P.E., Bhalerao, A.H., Hawkes, D.J. (1997). Multiresolution, model-based segmentation of MR angiograms. Journal of magnetic resonance imaging : JMRI, 7 (6), 950-957. doi:10.1002/jmri.1880070603
Weese, J., Penney, G.P., Desmedt, P., Buzug, T.M., Hill, D.L., Hawkes, D.J. (1997). Voxel-based 2-D/3-D registration of fluoroscopy images and CT scans for image-guided surgery. IEEE TRANS INF TECHNOL BIOMED, 1 (089-7771 (Print), 4), 284-293.
West, J., Fitzpatrick, J.M., Wang, M.Y., Dawant, B.M., Maurer, C.R., Jr, K., ...D, C. (1997). Comparison and evaluation of retrospective intermodality brain image registration techniques. J COMPUT ASSIST TOMOGR, 21 (363-8715 (Print), 4), 554-566.
West, J., Fitzpatrick, J.M., Wang, M.Y., Dawant, B.M., Maurer, C.R., Kessler, R.M., ...Collignon, A. (1997). Comparison and evaluation of retrospective intermodality brain image registration techniques. .JOURNAL OF COMPUTER ASSISTED TOMOGRAPHY.21. doi:10.1097/00004728-199707000-00007.
Wong, J.C., Studholme, C., Hawkes, D.J., Maisey, M.N. (1997). Evaluation of the limits of visual detection of image misregistration in a brain fluorine-18 fluorodeoxyglucose PET-MRI study. EUR J NUCL MED, 24 (340-6997 (Print), 6), 642-650.

1996

Bladin, C.F., Colchester, A.C., Hawkes, D.J., Seifalian, A.M., Iqbal, N., Hardingham, C.R. (1996). Morphological and hemodynamic assessments of carotid stenosis using quantitative digital subtraction angiography. STROKE, 27 (9), 1672-1678.
Hill, D.L.G., Smith, P.N.P., Emery, C.L., Summers, P.E., Keevil, S.F., Pracy, J.P.M., ...Gleeson, M.J. (1996). MRI guided intranasal flexible micro-endoscopy. .VISUALIZATION IN BIOMEDICAL COMPUTING.1131.
Studholme, C., Hill, D.L.G., Hawkes, D.J., I.E.E.E. (1996). Incorporating connected region labelling into automated image registration using mutual information. .PROCEEDINGS OF THE IEEE WORKSHOP ON MATHEMATICAL METHODS IN BIOMEDICAL IMAGE ANALYSIS. doi:10.1109/MMBIA.1996.534054.
Studholme, C., Hill, D.L., Hawkes, D.J. (1996). Automated 3-D registration of MR and CT images of the head. Medical image analysis, 1 (2), 163-175. doi:10.1016/s1361-8415(96)80011-9
Thomas, D.G., Doshi, P., Colchester, A., Hawkes, D.J., Hill, D.L., Zhao, J., ...Evans, R.I. (1996). Craniotomy guidance using a stereo-video-based tracking system. STEREOTACT FUNCT NEUROSURG, 66 (011-6125 (Print), 1-3), 81-83.
Wong, W.L., Hussain, K., Chevretton, E., Hawkes, D.J., Baddeley, H., Maisey, M., McGurk, M. (1996). Validation and clinical application of computer-combined computed tomography and positron emission tomography with 2-[18F]fluoro-2-deoxy-D-glucose head and neck images. The American Journal of Surgery, 172 (6), 628-632. doi:10.1016/S0002-9610(96)00313-3

1995

Edwards, P.J., Hawkes, D.J., Hill, D.L., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance. J IMAGE GUID SURG, 1 (078-7844 (Print), 3), 172-178.
Edwards, P.J., Hawkes, D.J., Hill, D.L., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance.. Journal of image guided surgery, 1 (3), 172-178.
Edwards, P.J., Hill, D.L.G., Little, J.A., Sahni, V.A.S., Hawkes, D.J. (1995). Medical image registration incorporating deformations. .PROCEEDINGS OF THE 6TH BRITISH MACHINE VISION CONFERENCE 1995, VOLS 1 AND 2.

1994

COLCHESTER, A., ZHAO, J., HENRI, C., EVANS, R., ROBERTS, P., MAITLAND, N., ...THOMAS, D. (1994). CRANIOTOMY SIMULATION AND GUIDANCE USING A STEREO VIDEO-BASED TRACKING SYSTEM. .VISUALIZATION IN BIOMEDICAL COMPUTER 1994.2359.
Gandhe, A.J., Hill, D.L., Studholme, C., Hawkes, D.J., Ruff, C.F., Cox, T.C., ...Strong, A.J. (1994). Combined and three-dimensional rendered multimodal data for planning cranial base surgery: a prospective evaluation. NEUROSURGERY, 35 (148-396X (Print), 3), 463-470.
Hawkes, D.J., Seifalian, A.M., Colchester, A.C., Iqbal, N., Hardingham, C.R., Bladin, C.F., Hobbs, K.E. (1994). Validation of volume blood flow measurements using three-dimensional distance-concentration functions derived from digital x-ray angiograms. INVEST RADIOL, 29 (4), 434-442.
Hill, D.L.G., Hawkes, D.J. (1994). Medical image registration using knowledge of adjacency of anatomical structures.. IMAGE AND VISION COMPUTING, 12 (3), 173-178. doi:10.1016/0262-8856(94)90069-8
Hill, D.L., Hawkes, D.J., Gleeson, M.J., Cox, T.C., Strong, A.J., Wong, W.L., ...Sofat, A. (1994). Accurate frameless registration of MR and CT images of the head: applications in planning surgery and radiation therapy.. Radiology, 191 (2), 447-454.
HILL, D., STUDHOLME, C., HAWKES, D. (1994). VOXEL SIMILARITY MEASURES FOR AUTOMATED IMAGE REGISTRATION. .VISUALIZATION IN BIOMEDICAL COMPUTER 1994.2359.
STUDHOLME, C., HILL, D., HAWKES, D. (1994). USING VOXEL SIMILARITY AS A MEASURE OF MEDICAL IMAGE REGISTRATION. .BMVC94 - PROCEEDINGS OF THE 5TH BRITISH MACHINE VISION CONFERENCE, VOLS 1 AND 2.

1993

Hill, D.L.G., Hawkes, D.J., Hussain, Z., Green, S.E.M., Ruff, C.F., Robinson, G.P. (1993). Accurate combination of CT and MR data of the head: Validation and applications in surgical and therapy planning.. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 17 (4-5), 357-363.
Neelin, P., Crossman, J., Hawkes, D.J., Ma, Y., Evans, A.C. (1993). Validation of an MRI/PET landmark registration method using 3D simulated PET images and point simulations. COMPUT MED IMAGING GRAPH, 17 (895-6111 (Print), 4-5), 351-356.
NEELIN, P., CROSSMAN, J., HAWKES, D., MA, Y., EVANS, A. (1993). VALIDATION OF AN MRI/PET LANDMARK REGISTRATION METHOD USING 3D SIMULATED PET IMAGES AND POINT SIMULATIONS. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 17 (4-5), 351-356. doi:10.1016/0895-6111(93)90028-L

1992

Brunt, J.N., Wicks, D.A., Hawkes, D.J., Seifalian, A.M., du Boulay, G.H., Colchester, A.F., Wallis, A. (1992). The measurement of blood flow waveforms from X-ray angiography. Part 1: Principles of the method and preliminary validation. Proceedings of the Institution of Mechanical Engineers. Part H, Journal of engineering in medicine, 206 (2), 73-85. doi:10.1243/pime_proc_1992_206_270_02
Maisey, M.N., Hawkes, D.J., Lukawieck-Vydelingum, A.M. (1992). Synergistic imaging. EUR J NUCL MED, 19 (340-6997 (Print), 12), 1002-1005.

1991

Hawkes, D.J., Hardingham, C.R., Colchester, A.C. (1991). Matching of geometric models in the analysis of lumen shape in digital X-ray angiography. PROG CLIN BIOL RES, 363 (361-7742 (Print)), 341-353.
Hawkes, D.J., Robinson, L., Crossman, J.E., Sayman, H.B., Mistry, R., Maisey, M.N., Spencer, J.D. (1991). Registration and display of the combined bone scan and radiograph in the diagnosis and management of wrist injuries. EUR J NUCL MED, 18 (340-6997 (Print), 9), 752-756.
Hill, D.L., Hawkes, D.J., Crossman, J.E., Gleeson, M.J., Cox, T.C., Bracey, E.E., ...Graves, P. (1991). Registration of MR and CT images for skull base surgery using point-like anatomical features. BR J RADIOL, 64 (007-1285 (Print), 767), 1030-1035.
Hill, D.L., Hawkes, D.J., Crossman, J.E., Gleeson, M.J., Cox, T.C., Bracey, E.E., ...Graves, P. (1991). Registration of MR and CT images for skull base surgery using point-like anatomical features.. The British journal of radiology, 64 (767), 1030-1035. doi:10.1259/0007-1285-64-767-1030
Lehmann, E.D., Hawkes, D.J., Hill, D.L., Bird, C.F., Robinson, G.P., Colchester, A.C., Maisey, M.N. (1991). Computer-aided interpretation of SPECT images of the brain using an MRI-derived 3D neuro-anatomical atlas. MED INFORM (LOND), 16 (307-7640 (Print), 2), 151-166.
Lynch, J.A., Hawkes, D.J., Buckland-Wright, J.C. (1991). A robust and accurate method for calculating the fractal signature of texture in macroradiographs of osteoarthritic knees. MED INFORM (LOND), 16 (307-7640 (Print), 2), 241-251.
Lynch, J.A., Hawkes, D.J., Buckland-Wright, J.C. (1991). Analysis of texture in macroradiographs of osteoarthritic knees using the fractal signature. Physics in Medicine and Biology, 36 (6), 709-722. doi:10.1088/0031-9155/36/6/001
Seifalian, A.M., Hawkes, D.J., Hardingham, C.R., Colchester, A.C., Reidy, J.F. (1991). Validation of a quantitative radiographic technique to estimate pulsatile blood flow waveforms using digital subtraction angiographic data. JOURNAL OF BIOMEDICAL ENGINEERING, 13 (3), 225-233.
Seifalian, A.M., Stansby, G.P., Hobbs, K.E., Hawkes, D.J., Colchester, A.C. (1991). Measurement of liver blood flow: a review. HPB surgery : a world journal of hepatic, pancreatic and biliary surgery, 4 (3), 171-186. doi:10.1155/1991/68915

1989

Seifalian, A.M., Hawkes, D.J., Colchester, A.C., Hobbs, K.E. (1989). A new algorithm for deriving pulsatile blood flow waveforms tested using stimulated dynamic angiographic data. NEURORADIOLOGY, 31 (3), 263-269.

1986

Hawkes, D.J., Jackson, D.F., Parker, R.P. (1986). Tissue analysis by dual-energy computed tomography. BR J RADIOL, 59 (007-1285 (Print), 702), 537-542.

1983

Jackson, D.F., Hawkes, D.J. (1983). Energy dependence in the spectral factor approach to computed tomography. Physics in Medicine and Biology, 28 (3), 289-293. doi:10.1088/0031-9155/28/3/010

1982

Husband, J.E., Hawkes, D.J., Peckham, M.J. (1982). CT estimations of mean attenuation values and volume in testicular tumors: a comparison with surgical and histologic findings. RADIOLOGY, 144 (033-8419 (Print), 3), 553-558.

1980

Hawkes, D.J., Jackson, D.F. (1980). An accurate parametrisation of the x-ray attenuation coefficient. Physics in Medicine and Biology, 25 (6), 1167-1171. doi:10.1088/0031-9155/25/6/014
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