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David Hawkes

Layout Image

David Hawkes

Research

 

Dave Hawkes is currently the Director of the Centre for Medical Image Computing, previously having been Director of the EPSRC and MRC funded Interdisciplinary Research Collaboration on Medical Images and Signals (MIAS-IRC), an £8M six year programme, from 2003 to 2007 and Chairman of the Division of Imaging Sciences at KCL (2002-2004). He spent 10 years working as a clinical scientist within the NHS before returning to academia. He is co-Founder of IXICO Ltd. (www.ixico.com), a university spin-out that provides imaging solutions to the pharmaceutical industry. His current research interests encompass image matching, data fusion, visualisation, shape representation, surface geometry and modelling tissue deformation promoting medical imaging as an accurate measurement tool and image guided interventions.

Contact Details:

University College London
Centre for Medical Image Computing
3rd Floor
Engineering Front Building
Malet Place
London WC1E 6BT
United Kingdom

Office: 3.02
Tel: +44 (0)20 7679 0221 (Direct Dial)
Internal: 30321
Fax: +44 (0)20 7679 0225
Email: d.hawkes@ucl.ac.uk

Publications

2018

Banerjee, J., Patel, P.A., Ushakov, F., Peebles, D., Deprest, J., Ourselin, S., ...Vercauteren, T. (2018). A Log-Euclidean and Total Variation based Variational Framework for Computational Sonography.
Bonet-Carne, E., Tariq, M., Pye, H., Brizmohun, M., Haider, A., Bayley, C., ...Atkinson, D. (2018). Histological Validation of in-vivo VERDICT MRI for Prostate using 3D Personalised Moulds.
Kuzhagaliyev, T., Clancy, N.T., Janatka, M., Tchaka, K., Vasconcelos, F., Clarkson, M.J., ...Stoyanov, D. (2018). Augmented Reality needle ablation guidance tool for Irreversible Electroporation in the pancreas.

2017

Bailey, C., Bourne, R.M., Siow, B., Johnston, E.W., Pye, H., Heavey, S., ...Patel, D. (2017). Validation of VERDICT MRI using fresh and fixed prostate specimens with aligned histological slices.
Bailey, C.E.M., Grussu, F., Siow, B., Mertzanidou, T., Hipwell, J.H., Owen, J., ...Hawkes, D.J. (2017). Diffusion anisotropy in breast cancer tissue corresponds to spatial patterns of collagen alignment from structure tensor analysis of histology.
Bourne, R.M., Bailey, C.E.M., Johnston, E.W., Pye, H., Heavey, S., Whitaker, H., ...Sridhar, A. (2017). Apparatus for histological validation of in vivo and ex vivo magnetic resonance imaging of the human prostate. Frontiers in Oncology, doi:10.3389/fonc.2017.00047
Bragman, F.J.S., McClelland, J.R., Jacob, J., Hurst, J.R., Hawkes, D.J. (2017). Manifold Learning of COPD.
Bragman, F., McClelland, J., Jacob, J., Hurst, J., Hawkes, D. (2017). Pulmonary Lobe Segmentation with Probabilistic Segmentation of the Fissures and a Groupwise Fissure Prior. IEEE Transactions on Medical Imaging, 1. doi:10.1109/TMI.2017.2688377
Donaldson, I., Hamid, S., Barratt, D., Hu, Y., Rodell, R., Villarini, B., ...McCartan, N. (2017). THE SMARTTARGET BIOPSY TRIAL: A PROSPECTIVE PAIRED BLINDED TRIAL WITH RANDOMISATION TO COMPARE VISUAL-ESTIMATION AND IMAGE-FUSION TARGETED PROSTATE BIOPSIES.
Doran, S.J., Hipwell, J.H., Denholm, R., Eiben, B., Busana, M., Hawkes, D.J., ...Dos Santos Silva, I. (2017). Breast MRI segmentation for density estimation: Do different methods give the same results and how much do differences matter?. Medical physics, doi:10.1002/mp.12320
Fast, M.F., Eiben, B., Menten, M.J., Wetscherek, A., Hawkes, D.J., McClelland, J.R., Oelfke, U. (2017). Tumour auto-contouring on 2d cine MRI for locally advanced lung cancer: A comparative study. Radiotherapy and Oncology, doi:10.1016/j.radonc.2017.09.013
Gibson, E., Robu, M.R., Thompson, S., Edwards, P., Schneider, C., Gurusamy, K., ...Clarkson, M.J. (2017). Deep residual networks for automatic segmentation of laparoscopic videos of the liver.
Hampshire, T., Menys, A., Jaffer, A., Bhatnagar, G., Punwani, S., Atkinson, D., ...Taylor, S.A. (2017). A Probabilistic Method for Estimation of Bowel Wall Thickness in MR Colonography.. PLoS One, 12 (1), e0168317. doi:10.1371/journal.pone.0168317
Han, L., Dong, H., McClelland, J.R., Han, L., Hawkes, D.J., Barratt, D.C. (2017). A hybrid patient-specific biomechanical model based image registration method for the motion estimation of lungs. MEDICAL IMAGE ANALYSIS, 39 87-100. doi:10.1016/j.media.2017.04.003
Johnston, E., Bailey, C., Bonet-Carne, E., Pye, H., Heavey, S., Patel, D., ...Devine, W. (2017). Why is the Peripheral Zone of the Normal Human Prostate High in ADC Value and T2-Weighted Signal Intensity?.
Johnston, E., Bonet-Carne, E., Pye, H., Clemente, J., Yvernault, B., Patel, D., ...Sridhar, A. (2017). Microstructural Diffusion-Weighted (VERDICT) MRI Metrics are Repeatable and Show Potential at Characterising Gleason 7 Prostate Cancer Non-Invasively.
Lacher, R.M., V.a.s.c.o.n.c.e.l.o.s., B.i.s.h.o.p., W.i.l.l.i.a.m.s., K.e.s.h.t.g.a.r., H.a.w.k.e.s., ......S.t.o.y.a.n.o.v. (2017). A comparative study of breast surface reconstruction for aesthetic outcome assessment. arXiv,
McClelland, J.R., Modat, M., Arridge, S., Grimes, H., D'Souza, D., Thomas, D., ...Collins, D. (2017). A generalized framework unifying image registration and respiratory motion models and incorporating image reconstruction, for partial image data or full images.. Physics in Medicine and Biology, doi:10.1088/1361-6560/aa6070
Mertzanidou, T., Hipwell, J.H., Reis, S., Hawkes, D.J., Bejnordi, B.E., Dalmis, M., ...Karssemeijer, N. (2017). 3D volume reconstruction from serial breast specimen radiographs for mapping between histology and 3D whole specimen imaging. Med Phys, doi:10.1002/mp.12077
Ramalhinho, J., Robu, M., Thompson, S., Edwards, P., Schneider, C., Gurusamy, K., ...Clarkson, M.J. (2017). Breathing motion compensated registration of laparoscopic liver ultrasound to CT.
Reis, S., Gazinska, P., Hipwell, J., Mertzanidou, T., Naidoo, K., Williams, N., ...Hawkes, D.J. (2017). Automated Classification of Breast Cancer Stroma Maturity from Histological Images.. IEEE Trans Biomed Eng, doi:10.1109/TBME.2017.2665602
Robu, M.R., Edwards, P., Ramalhinho, J.A., Thompson, S., Davidson, B., Hawkes, D., ...Clarkson, M.J. (2017). Intelligent viewpoint selection for efficient CT to video registration in laparoscopic liver surgery. International Journal of Computer Assisted Radiology and Surgery, 1-10. doi:10.1007/s11548-017-1584-7
Schneider, C., Johnson, S.P., Gurusamy, K., Cook, R.J., Desjardins, A.E., Hawkes, D.J., ...Walker-Samuel, S. (2017). Identification of liver metastases with probe-based confocal laser endomicroscopy at two excitation wavelengths.. Lasers Surg Med, doi:10.1002/lsm.22617
Simmons, L.A.M., Kanthabalan, A., Arya, M., Briggs, T., Barratt, D., Charman, S.C., ...Hu, Y. (2017). The PICTURE study: diagnostic accuracy of multiparametric MRI in men requiring a repeat prostate biopsy. British Journal of Cancer, doi:10.1038/bjc.2017.57
Thompson, S., Meurer, Y., Edwards, P., Ramalhinho, J., Robu, M.R., Stoyanov, D., ...Clarkson, M.J. (2017). On Pattern Selection for Laparoscope Calibration.
Vavourakis, V., Wijeratne, P.A., Shipley, R., Loizidou, M., Stylianopoulos, T., Hawkes, D.J. (2017). A Validated Multiscale In-Silico Model for Mechano-sensitive Tumour Angiogenesis and Growth.. PLOS Computational Biology, 13 (1), e1005259. doi:10.1371/journal.pcbi.1005259
Veiga, C.I.C.V.D., Landau, D., McClelland, J., Ledermann, J., Hawkes, D., Janes, S., Devaraj, A. (2017). Long term radiological features of radiation-induced lung damage. Radiotherapy and Oncology, doi:10.1016/j.radonc.2017.11.003
Veiga, C., Landau, D., Devaraj, A., Doel, T., Hawkes, D., McClelland, J. (2017). Quantification of Radiation Therapy-Induced Diaphragmatic Changes Using Serial CT Imaging.
Wijeratne, P.A., Hipwell, J.H., Hawkes, D.J., Stylianopoulos, T., Vavourakis, V. (2017). Multiscale biphasic modelling of peritumoural collagen microstructure: The effect of tumour growth on permeability and fluid flow.. PloS one, 12 (9), e0184511. doi:10.1371/journal.pone.0184511

2016

Bailey, C.E.M., Siow, B., Panagiotaki, E., Hipwell, J.H., Mertzanidou, T., Owen, J., ...Hawkes, D.J. (2016). Microstructure models for diffusion MRI in breast cancer and surrounding stroma: an ex vivo study. NMR in Biomedicine, doi:10.1002/nbm.3679
Bailey, C.E.M., Siow, B., Panagiotaki, E., Hipwell, J.H., Pinder, S.E., Alexander, D.C., Hawkes, D.J. (2016). Microstructure models for diffusion MRI in breast cancer and surrounding stroma: an ex vivo study.
Denholm, R., De Stavola, B., Hipwell, J.H., Doran, S.J., Busana, M.C., Eng, A., ...Dos Santos Silva, I. (2016). Pre-natal exposures and breast tissue composition: findings from a British pre-birth cohort of young women and a systematic review.. Breast Cancer Res, 18 (1), 102. doi:10.1186/s13058-016-0751-z
Du, X., Allan, M., Dore, A., Ourselin, S., Hawkes, D., Kelly, J.D., Stoyanov, D. (2016). Combined 2D and 3D tracking of surgical instruments for minimally invasive and robotic-assisted surgery. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 11 (6), 1109-1119. doi:10.1007/s11548-016-1393-4
Eiben, B., Lacher, R., Vavourakis, V., Hipwell, J.H., Stoyanov, D., Williams, N., ...Meetz, K. (2016). Breast conserving surgery outcome prediction: a patient-specific, integrated multi-modal imaging and mechano-biological modelling framework. In Tingberg, A., Lång, K. (Eds.), Breast Imaging. (pp. 274-281). Springer.
Eiben, B., Vavourakis, V., Hipwell, J.H., Kabus, S., Buelow, T., Lorenz, C., ...Keshtgar, M. (2016). Symmetric Biomechanically Guided Prone-to-Supine Breast Image Registration. ANNALS OF BIOMEDICAL ENGINEERING, 44 (1), 154-173. doi:10.1007/s10439-015-1496-z
Eiben, B., Vavourakis, V., Hipwell, J.H., Kabus, S., Lorenz, C., Buelow, T., ...Hawkes, D.J. (2016). Surface Driven Biomechanical Breast Image Registration.
Hawkes, D.J. (2016). From clinical imaging and computational models to personalised medicine and image guided interventions.. Medical image analysis, doi:10.1016/j.media.2016.06.022
Hayashi, Y., Misawa, K., Hawkes, D.J., Mori, K. (2016). Progressive internal landmark registration for surgical navigation in laparoscopic gastrectomy for gastric cancer. International Journal of Computer Assisted Radiology and Surgery, 11 (5), 837-845. doi:10.1007/s11548-015-1346-3
Hill, E.R., Xia, W., Nikitichev, D., Gurusamy, K., Beard, P., Hawkes, D.J., ...Desjardins, A. (2016). Interventional multi-spectral photoacoustic imaging in laparoscopic surgery.
Hipwell, J.H., Vavourakis, V., Han, L., Mertzanidou, T., Eiben, B., Hawkes, D.J. (2016). A review of biomechanically informed breast image registration. PHYSICS IN MEDICINE AND BIOLOGY, 61 (2), R1-R31. doi:10.1088/0031-9155/61/2/R1
Hu, Y., Bonmati, E., Gibson, E., Hipwell, J.H., Hawkes, D.J., Bandula, S., ...Barratt, D.C. (2016). 2D-3D registration accuracy estimation for optimised planning of image-guided pancreatobiliary interventions.
Hu, Y., Kasivisvanathan, V., Simmons, L., Clarkson, M., Thompson, S., Shah, T., ...Emberton, M. (2016). Development and Phantom Validation of a 3D-Ultrasound-Guided System for Targeting MRI-visible Lesions during Transrectal Prostate Biopsy. IEEE Transactions on Biomedical Engineering,
Johnston, E.W., Pye, H., Bonet-Carne, E., Panagiotaki, E., Patel, D., G.a.l.a.z.i., ...Trevisan, G. (2016). INNOVATE: A prospective cohort study combining serum and urinary biomarkers with novel diffusion-weighted magnetic resonance imaging for the prediction and characterization of prostate cancer.. BMC Cancer,
Mazomenos, E.B., Chang, P.-.L., Rippel, R.A., Rolls, A., Hawkes, D.J., Bicknell, C.D., ...Stoyanov, D. (2016). Catheter manipulation analysis for objective performance and technical skills assessment in transcatheter aortic valve implantation. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 11 (6), 1121-1131. doi:10.1007/s11548-016-1391-6
Mazomenos, E.B., Chang, P.-.L., Rolls, A., Hawkes, D.J., Bicknell, C.D., Poorten, E.V., ...Stoyanov, D. (2016). A Survey on the Current Status and Future Challenges Towards Objective Skills Assessment in Endovascular Surgery. Journal of Medical Robotics Research, 1640010. doi:10.1142/S2424905X16400109
Mertzanidou, T., Hipwell, J.H., Reis, S., Bejnordi, B.E., Hermsen, M., Dalmis, M., ...Karssemeijer, N. (2016). Whole Mastectomy Volume Reconstruction from 2D Radiographs and Its Mapping to Histology.
O Connor, J.P.B., Aboagye, E.O., Adams, J.E., Aerts, H.J.W.L., Barrington, S.F., Beer, A.J., ...Brown, G. (2016). Imaging biomarker roadmap for cancer studies. Nature reviews Clinical oncology, doi:10.1038/nrclinonc.2016.162
Reis, S., Gazinska, P., Hipwell, J.H., Mertzanidou, T., Naidoo, K., Pinder, S., Hawkes, D.J. (2016). Classification of Breast Cancer Stroma as a Tool for Prognosis.
Schneider, C., Johnson, S.P., Walker-Samuel, S., Gurusamy, K., Clarkson, M.J., Thompson, S., ...Desjardins, A.E. (2016). Utilizing confocal laser endomicroscopy for evaluating the adequacy of laparoscopic liver ablation. LASERS IN SURGERY AND MEDICINE, 48 (3), 299-310. doi:10.1002/lsm.22464
Thompson, S.A., Schneider, C., Gurusamy, K., Hawkes, D., Davidson, B., Clarkson, M. (2016). Development, Validation, and Modelling of Image Guidance Systems for Surgery.
Thompson, S., Stoyanov, D., Schneider, C., Gurusamy, K., Ourselin, S., Davidson, B., ...Clarkson, M.J. (2016). Hand-eye calibration for rigid laparoscopes using an invariant point. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 11 (6), 1071-1080. doi:10.1007/s11548-016-1364-9
Vavourakis, V., Eiben, B., Hipwell, J.H., Williams, N.R., Keshtgar, M., Hawkes, D.J. (2016). BREAST-CONSERVING SURGERY: A VALIDATED 3D, MULTISCALE, MECHANO -BIOLOGICAL, MODELLING FRAMEWORK FOR SURGICAL PLANNING AND COSMETIC OUTCOME PREDICTION OF BREAST CANCER TREATMENT.
Vavourakis, V., Eiben, B., Hipwell, J.H., Williams, N.R., Keshtgar, M., Hawkes, D.J. (2016). Multiscale mechano-biological finite element modelling of oncoplastic breast surgery - Numerical study towards surgical planning and cosmetic outcome prediction. PLoS ONE, 11 (7), doi:10.1371/journal.pone.0159766
Vavourakis, V., Hipwell, J.H., Hawkes, D.J. (2016). An Inverse Finite Element u/p-Formulation to Predict the Unloaded State of In Vivo Biological Soft Tissues. ANNALS OF BIOMEDICAL ENGINEERING, 44 (1), 187-201. doi:10.1007/s10439-015-1405-5
Vavourakis, V., Wijeratne, P., Shipley, R., Stylianopoulos, T., Hawkes, D.J. (2016). The Mechanical Underpinning of Tumour-induced Angiogenesis and Growth.
Wijeratne, P.A., Vavourakis, V., Hipwell, J.H., Voutouri, C., Papageorgis, P., Stylianopoulos, T., ...Hawkes, D.J. (2016). Multiscale modelling of solid tumour growth: the effect of collagen micromechanics. BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, 15 (5), 1079-1090. doi:10.1007/s10237-015-0745-2
Wijeratne, P., Vavourakis, V., Hipwell, J.H., Shipley, R., Stylianopoulos, T., Evans, A., ...Hawkes, D.J. (2016). MULTISCALE BIPHASIC MODELLING OF TUMOUR GROWTH: THE EFFECT OF COLLAGEN MICROMECHANICS ON DRUG DELIVERY.

2015

Allan, M., Chang, P.-.L., Ourselin, S., Hawkes, D.J., Sridhar, A., Kelly, J., Stoyanov, D. (2015). Image Based Surgical Instrument Pose Estimation with Multi-class Labelling and Optical Flow.
Bailey, C., Panagiotaki, E., Tunariu, N., Orton, M.R., Morgan, V.A., Feiweier, T., ...Alexander, D.C. (2015). Modelling tissue microstructure in bone metastases from prostate cancer using VERDICT MRI.
Hayashi, Y., Misawa, K., Oda, M., Hawkes, D.J., Mori, K. (2015). Clinical application of a surgical navigation system based on virtual laparoscopy in laparoscopic gastrectomy for gastric cancer. International Journal of Computer Assisted Radiology and Surgery, 11 (5), 827-836. doi:10.1007/s11548-015-1293-z
Johnsen, S.F. (2015). Database-Based Estimation of Liver Deformation under Pneumoperitoneum for Surgical Image-Guidance and Simulation.
Johnsen, S.F., Taylor, Z.A., Clarkson, M.J., Hipwell, J., Modat, M., Eiben, B., ...Hawkes, D.J. (2015). NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics.. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 10 (7), 1077-1095. doi:10.1007/s11548-014-1118-5
Johnsen, S.F., Taylor, Z.A., Han, L., Hu, Y., Clarkson, M.J., Hawkes, D.J., Ourselin, S. (2015). Detection and modelling of contacts in explicit finite-element simulation of soft tissue biomechanics. International Journal of Computer Assisted Radiology and Surgery, 1-19. doi:10.1007/s11548-014-1142-5
Lacher, R.M., Hipwell, J.H., Williams, N.R., Keshtgar, M.R., Hawkes, D.J., Stoyanov, D. (2015). Low-cost surface reconstruction for aesthetic results assessment and prediction in breast cancer surgery.
Morin, R., Eiben, B., Bidaut, L., Hipwell, J., Evans, A., Hawkes, D.J. (2015). 3D ULTRASOUND SIMULATION BASED ON A BIOMECHANICAL MODEL OF PRONE MRI IN BREAST CANCER IMAGING.
Panagiotaki, E., Chan, R.W., Dikaios, N., Ahmed, H., O'Callaghan, J., Freeman, A., ...Alexander, D.C. (2015). Microstructural characterisation of normal and malignant human prostate tissue with VERDICT MRI. Investigative Radiology, 50 (4), 218-227. doi:10.1097/RLI.0000000000000115
Panagiotaki, E., Ianus, A., Johnston, E., Chan, R.W., Atkinson, D., P.u.n.w.a.n.i., ...Alexander, D. (2015). Optimised VERDICT MRI protocol for prostate cancer characterisation.
Reis, S., Eiben, B., Mertzanidou, T., Hipwell, J., Hermsen, M., van der Laak, J., ...Hawkes, D. (2015). Minimum Slice Spacing Required To Reconstruct 3D Shape For Serial Sections Of Breast Tissue For Comparison With Medical Imaging.
Schneider, C., Desjardins, A.E., Gurusamy, K., Hawkes, D.J., Davidson, B.R. (2015). Laparoscopic Manipulation of a Probe-based Confocal Laser Endomicroscope Using a Steerable Intravascular Catheter. SURGICAL LAPAROSCOPY ENDOSCOPY & PERCUTANEOUS TECHNIQUES, 25 (2), E83-E85. doi:10.1097/SLE.0000000000000139
Schneider, C., Thompson, S., Totz, J., Song, Y., Johnsen, S., Stoyanov, D., ...Clarkson, M. (2015). EVALUATION OF A NOVEL SYSTEM FOR IMAGE GUIDED LAPAROSCOPIC LIVER SURGERY IN AN ANIMAL MODEL AND FIRST CLINICAL EXPERIENCE.
Song, Y., Totz, J., Thompson, S., Johnsen, S., Barratt, D., Schneider, C., ...Hawkes, D. (2015). Locally rigid, vessel-based registration for laparoscopic liver surgery. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 10 (12), 1951-1961. doi:10.1007/s11548-015-1236-8
Thompson, S., Totz, J., Song, Y., Stoyanov, D., Ourselin, S., Hawkes, D., Clarkson, M. (2015). Accuracy validation of an image guided laparoscopy system for liver resection.
White, M.J., Thornton, J.S., Hawkes, D.J., Hill, D.L.G., Kitchen, N., Mancini, L., ...Yousry, T. (2015). Design, operation, and safety of single-room interventional MRI suites: Practical experience from two centers. Journal of Magnetic Resonance Imaging, 41 (1), 34-43. doi:10.1002/jmri.24577
White, M.J., Thornton, J.S., Hawkes, D.J., Hill, D.L.G., Kitchen, N., Mancini, L., ...Yousry, T. (2015). Design, operation, and safety of single-room interventional MRI suites: practical experience from two centers.. JOURNAL OF MAGNETIC RESONANCE IMAGING, 41 (1), 34-43. doi:10.1002/jmri.24577

2014

Allan, M., Thompson, S., Clarkson, M., Ourselin, S., Hawkes, D., Kelly, J., Stoyanov, D. (2014). 2D-3D pose tracking of rigid instruments in minimally invasive surgery.
Bailey, C., Vinnicombe, S., Panagiotaki, E., Waugh, S.A., Hipwell, J.H., Alexander, D.C., ...Evans, A. (2014). Modeling vascularity in breast cancer and surrounding stroma using diffusion MRI and intravoxel incoherent motion.
Bailey, C., Vinnicombe, S., Panagiotaki, E., Waugh, S., Hipwell, J.H., Whelehan, P., ...Hawkes, D.J. (2014). Modelling vasculature and cellular restriction in breast tumours using diffusion MRI.
Bragman, F.J.S., McClelland, J.R., Modat, M., Ourselin, S., Hurst, J.R., Hawkes, D.J. (2014). Multi-scale Analysis of Imaging Features and Its Use in the Study of COPD Exacerbation Susceptible Phenotypes. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2014, PT III, 8675 417-424.
Bragman, F.J.S., McClelland, J.R., Modat, M., Ourselint, S., Hurst, J.R., Hawkes, D.J. (2014). Multi-scale analysis of imaging features and its use in the study of COPD exacerbation susceptible phenotypes.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 17 (Pt 3), 417-424.
Clarkson, M.J., Zombori, G., Thompson, S., Totz, J., Song, Y., Espak, M., ...Ourselin, S. (2014). The NifTK Software Platform for Image Guided Interventions. International Journal of Computer Assisted Radiology and Surgery,
Eiben, B., Vavourakis, V., Hipwell, J.H., Kabus, S., Lorenz, C., Buelow, T., Hawkes, D.J. (2014). Breast deformation modelling: comparison of methods to obtain a patient specific unloaded configuration.
Han, L., Hawkes, D.J., Barratt, D.C. (2014). A hybrid biomechanical model-based image registration method for sliding objects.
Han, L., Hipwell, J., Eiben, B., Barratt, D.C., Ourselin, S., Hawkes, D.J. (2014). A Non-linear Biomechanical Model Based Registration Method for Aligning Prone and Supine MR Breast Images. IEEE Transactions on Medical Imaging, doi:10.1109/TMI.2013.2294539
Helbren, E., Roth, H.R., Hampshire, T.E., Pickhardt, P.J., Taylor, S.A., Hawkes, D.J., Halligan, S. (2014). CT colonography: clinical evaluation of a method for automatic coregistration of polyps at follow-up surveillance studies.. RADIOLOGY, 273 (2), 417-424. doi:10.1148/radiol.14140473
Johnson, S.P., Schneider, C., Desjardins, A., Walker-Samuel, S., Hawkes, D. (2014). Confocal fluorescence endomicroscopy in vivo for the detection of tumour microenvironment and healthy tissue margin. EUROPEAN JOURNAL OF CANCER, 50 S168-S169. doi:10.1016/S0959-8049(14)50618-1
Martin, J., McClelland, J., Champion, B., Hawkes, D.J. (2014). Building surrogate-driven motion models from cone-beam CT via surrogate-correlated optical flow.
Martin, J., McClelland, J., Champion, B., Hawkes, D.J. (2014). Building surrogate-driven motion models from cone-beam CT via surrogate-correlated optical flow.
Martin, J., McClelland, J., Yip, C., Thomas, C., Hartill, C., Ahmad, S., ...Hawkes, D. (2014). Fully-deformable patient motion models from cone-beam CT for radiotherapy applications. XVII INTERNATIONAL CONFERENCE ON THE USE OF COMPUTERS IN RADIATION THERAPY (ICCR 2013), 489 doi:10.1088/1742-6596/489/1/012034
McClelland, J.R., Champion, B.A.S., Hawkes, D.J. (2014). Combining Image Registration, Respiratory Motion Modelling, and Motion Compensated Image Reconstruction.
Mertzanidou, T., Hipwell, J., Dalmis, M., Platel, B., Van Der Laak, J., Mann, R., ...Hawkes, D. (2014). Towards spatial correspondence between specimen and in-vivo breast imaging.
Mertzanidou, T., Hipwell, J., Johnsen, S., Han, L., Eiben, B., Taylor, Z., ...Bick, U. (2014). MRI to X-ray mammography intensity-based registration with simultaneous optimisation of pose and biomechanical transformation parameters.. MEDICAL IMAGE ANALYSIS, 18 (4), 674-683. doi:10.1016/j.media.2014.03.003
Panagiotaki, E., Chan, R.W., Dikaios, N., Ahmed, H., Atkinson, D., Punwani, S., ...Alexander, D.C. (2014). Microstructural characterisation of normal and malignant human prostate tissue with VERDICT-MRI.
Roth, H.R., Hampshire, T.E., Helbren, E., Hu, M., Vega, R., Halligan, S., Hawkes, D.J. (2014). Computer-assisted polyp matching between optical colonoscopy and CT colonography: a phantom study. MEDICAL IMAGING 2014: IMAGE-GUIDED PROCEDURES, ROBOTIC INTERVENTIONS, AND MODELING, 9036 doi:10.1117/12.2042860
Totz, J., Thompson, S., Stoyanov, D., Gurusamy, K., Davidson, B., Hawkes, D., Clarkson, M. (2014). Fast semi-dense surface reconstruction from stereoscopic video in laparoscopic surgery..

2013

Allan, M., Ourselin, S., Thompson, S., Hawkes, D.J., Kelly, J., Stoyanov, D. (2013). Toward detection and localization of instruments in minimally invasive surgery.. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 60 (4), 1050-1058. doi:10.1109/TBME.2012.2229278
Allan, M., Ourselin, S., Thompson, S., Hawkes, D.J., Kelly, J., Stoyanov, D. (2013). Toward Detection and Localization of Instruments in Minimally Invasive Surgery.. IEEE Trans. Biomed. Engineering, 60 1050-1058. doi:10.1109/TBME.2012.2229278
Boone, D.J., Halligan, S., Roth, H.R., Hampshire, T.E., Helbren, E., Slabaugh, G.G., ...Punwani, S. (2013). CT colonography: external clinical validation of an algorithm for computer-assisted prone and supine registration.. RADIOLOGY, 268 (3), 752-760. doi:10.1148/radiol.13122083
Brock, K., Dong, L., Hawkes, D. (2013). TU‐G‐WAB‐01: Advanced Applications in Deformable Registration. Medical Physics, 40 (6), 455-456. doi:10.1118/1.4815460
Eiben, B., Han, L., Hipwell, J., Mertzanidou, T., Kabus, S., Buelow, T., ...Keshtgar, M. (2013). Biomechanically guided prone-to-supine image registration of breast MRI using an estimated reference state.
Garvey, C.C., Cahill, N.D., Melbourne, A., Tanner, C., Ourselin, S., Hawkes, D.J. (2013). NONRIGID IMAGE REGISTRATION WITH TWO-SIDED SPACE-FRACTIONAL PARTIAL DIFFERENTIAL EQUATIONS. 2013 20TH IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP 2013), 747-751.
Hampshire, T., Helbren, E., Plumb, A., Roth, H., Halligan, S., Hawkes, D. (2013). Spatial Correspondence between Prone and Supine CT Colonography Images: Creating a Reference Standard.
Hampshire, T., Roth, H.R., Helbren, E., Plumb, A., Boone, D., Slabaugh, G., ...Hawkes, D.J. (2013). Endoluminal surface registration for CT colonography using haustral fold matching. MEDICAL IMAGE ANALYSIS, 17 (8), 946-958. doi:10.1016/j.media.2013.04.006
Martin, J., McClelland, J., Yip, C., Thomas, C., Hartill, C., Ahmad, S., ...Hawkes, D. (2013). Building motion models of lung tumours from cone-beam CT for radiotherapy applications.. PHYSICS IN MEDICINE AND BIOLOGY, 58 (6), 1809-1822. doi:10.1088/0031-9155/58/6/1809
McClelland, J.R., Hawkes, D.J., Schaeffter, T., King, A.P. (2013). Respiratory motion models: a review.. MEDICAL IMAGE ANALYSIS, 17 (1), 19-42. doi:10.1016/j.media.2012.09.005
Miquel, M.E., Blackall, J.M., Uribe, S., Hawkes, D.J., Schaeffter, T. (2013). Patient-specific respiratory models using dynamic 3D MRI: Preliminary volunteer results. PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS, 29 (2), 214-220. doi:10.1016/j.ejmp.2012.03.003
Roth, H., McClelland, J., Hampshire, T., Boone, D., Hu, Y., Modat, M., ...Hawkes, D.J. (2013). Registration of Prone and Supine CT Colonography Datasets with Differing Endoluminal Distension.. In Yoshida, H., Warfield, S.K., Vannier, M.W. (Eds.), Abdominal Imaging. Computation and Clinical Applications. (pp. 29-38). Springer.
Roth, H.R., Helbren, E., Hampshire, T.E., Pickhardt, P.J., Halligan, S., Hawkes, D.J. (2013). Registration of Temporally Separated CT Colonography Cases.
Roth, H.R., McClelland, J.R., Modat, M., Hampshire, T.E., Boone, D.J., Helbren, E., ...Halligan, S. (2013). CT colonography: Inverse-consistent symmetric registration of prone and supine inner colon surfaces.
Thompson, S., Penney, G., Billia, M., Challacombe, B., Hawkes, D., Dasgupta, P. (2013). Design and evaluation of an image-guidance system for robot-assisted radical prostatectomy.. BJU INTERNATIONAL, 111 (7), 1081-1090. doi:10.1111/j.1464-410X.2012.11692.x
Thompson, S., Penney, G., Dasgupta, P., Hawkes, D. (2013). Improved Modelling of Tool Tracking Errors by Modelling Dependent Marker Errors. IEEE TRANSACTIONS ON MEDICAL IMAGING, 32 (2), 165-177. doi:10.1109/TMI.2012.2216890
Yang, G., Hipwell, J.H., Hawkes, D.J., Arridge, S.R. (2013). Numerical Methods for Coupled Reconstruction and Registration in Digital Breast Tomosynthesis. The Annals of the BMVA,

2012

Allain, B., Hu, M., Lovat, L.B., Cook, R.J., Vercauteren, T., Ourselin, S., Hawkes, D.J. (2012). Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty.. Medical Image Analysis, 16 (2), 482-496. doi:10.1016/j.media.2011.11.005
Hampshire, T., Roth, H., Boone, D., Slabaugh, G., Halligan, S., Hawkes, D. (2012). Prone to Supine CT Colonography Registration Using a Landmark and Intensity Composite Method. Abdominal Imaging. Computational and Clinical Applications, 1-9.
Han, L., Hipwell, J.H., Tanner, C., Taylor, Z., Mertzanidou, T., Cardoso, J., ...Hawkes, D.J. (2012). Development of patient-specific biomechanical models for predicting large breast deformation.. PHYSICS IN MEDICINE AND BIOLOGY, 57 (2), 455-472. doi:10.1088/0031-9155/57/2/455
Hawkes, D.J., Mertzanidou, T., Hipwell, J., Atkinson, D., Roth, H., Hampshire, T. (2012). Establishing spatial correspondence for the analysis of images from highly deforming anatomy.
Hipwell, J.H., Griffin, L.D., Whelehan, P.J., Song, W., Zhang, X., Lesniak, J.M., ...Hawkes, D.J. (2012). Characterizing breast phenotype with a novel measure of fibroglandular structure.
Hu, M., Penney, G., Figl, M., Edwards, P., Bello, F., Casula, R., ...Hawkes, D. (2012). Reconstruction of a 3D surface from video that is robust to missing data and outliers: application to minimally invasive surgery using stereo and mono endoscopes.. MEDICAL IMAGE ANALYSIS, 16 (3), 597-611. doi:10.1016/j.media.2010.11.002
Hu, Y., Ahmed, H.U., Carter, T., Arumainayagam, N., Lecornet, E., Barzell, W., ...Villers, A. (2012). A biopsy simulation study to assess the accuracy of several transrectal ultrasonography (TRUS)-biopsy strategies compared with template prostate mapping biopsies in patients who have undergone radical prostatectomy.. BJU INTERNATIONAL, 110 (6), 812-820. doi:10.1111/j.1464-410X.2012.10933.x
Hu, Y., Ahmed, H.U., Taylor, Z., Allen, C., Emberton, M., Hawkes, D., Barratt, D. (2012). MR to ultrasound registration for image-guided prostate interventions.. MEDICAL IMAGE ANALYSIS, 16 (3), 687-703. doi:10.1016/j.media.2010.11.003
Lecornet, E., Ahmed, H.U., Hu, Y., Moore, C.M., Nevoux, P., Barratt, D., ...Emberton, M. (2012). The accuracy of different biopsy strategies for the detection of clinically important prostate cancer: a computer simulation.. J Urol, 188 974-980. doi:10.1016/j.juro.2012.04.104
Martin, J., McClelland, J., Thomas, C., Wildermuth, K., Landau, D., Ourselin, S., Hawkes, D. (2012). Motion modelling and motion compensated reconstruction of tumours in cone-beam computed tomography. Proceedings of the Workshop on Mathematical Methods in Biomedical Image Analysis, 281-286. doi:10.1109/MMBIA.2012.6164764
Mcclelland, J., Suh, Y., Ahmad, S., Hawkes, D. (2012). TH‐E‐218‐04: Study of Deformable Registration Based 4DCT Ventilation Imaging Methods.
McClelland, J., Suh, Y., Ahmad, S., Hawkes, D. (2012). Study of Deformable Registration Based 4DCT Ventilation Imaging Methods.
Melbourne, A., Cahill, N., Tanner, C., Modat, M., Hawkes, D.J., Ourselin, S. (2012). Using fractional gradient information in non-rigid image registration: Application to breast MRI. MEDICAL IMAGING 2012: IMAGE PROCESSING, 8314 doi:10.1117/12.911173
Mertzanidou, T., Hipwell, J., Cardoso, M.J., Zhang, X., Tanner, C., Ourselin, S., ...Hawkes, D. (2012). MRI to X-ray mammography registration using a volume-preserving affine transformation.. MEDICAL IMAGE ANALYSIS, 16 (5), 966-975. doi:10.1016/j.media.2012.03.001
Mertzanidou, T., Hipwell, J.H., Han, L., Taylor, Z.A., Huisman, H.J., Bick, U., ...Hawkes, D.J. (2012). Intensity-Based MRI to X-ray Mammography Registration with an Integrated Fast Biomechanical Transformation..
Roth, H., Boone, D., Halligan, S., Hampshire, T., McClelland, J., Hu, M., ...Hawkes, D. (2012). External Clinical Validation of Prone and Supine CT Colonography Registration. 7601 10-19. doi:10.1007/978-3-642-33612-6_2
Roth, H., Mcclelland, J., Modat, M., Hampshire, T., Boone, D., hu, M., ...Hawkes, D. (2012). WE‐E‐213CD‐03: Inverse‐Consistent Symmetric Registration of Inner Colon Surfaces Derived from Prone and Supine CT Colonography. Medical Physics, 39 (6), 3959-3960. doi:10.1118/1.4736159
Roth, H., McClelland, J., Modat, M., Hampshire, T., Boone, D., Hu, M., ...Hawkes, D. (2012). Inverse-Consistent Symmetric Registration of Inner Colon Surfaces Derived From Prone and Supine CT Colonography.
Roth, H.R., Hampshire, T.E., McClelland, J.R., Hu, M., Boone, D.J., Slabaugh, G.G., ...Hawkes, D.J. (2012). Inverse consistency error in the registration of prone and supine images in CT colonography. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 7029 LNCS 1-7. doi:10.1007/978-3-642-28557-8_1
Thompson, S., Penney, G., Challacombe, B., Hawkes, D., Dasgupta, P. (2012). Design and Evaluation of Image Guidance Systems for RARP.
Thompson, S., Penney, G., Challacombe, B., Hawkes, D., Dasgupta, P. (2012). EVALUATION OF IMAGE GUIDANCE SYSTEMS FOR ROBOT ASSISTED RADICAL PROSTATECTOMY. JOURNAL OF ENDOUROLOGY, 26 A407.
Waechter-Stehle, I., Groth, A., Bruijns, T., Brina, O., Ruefenacht, D.A., Kulcsar, Z., ...Weese, J. (2012). Model-based blood flow quantification from DSA: quantitative evaluation on patient data and comparison with TCCD.
Yang, G., Hipwell, J.H., Hawkes, D.J., Arridge, S.R. (2012). A Nonlinear Least Squares Method for Solving the Joint Reconstruction and Registration Problem in Digital Breast Tomosynthesis.
Yang, G., Hipwell, J.H., Tanner, C., Hawkes, D.J., Arridge, S.R. (2012). Joint Registration and Limited-Angle Reconstruction of Digital Breast Tomosynthesis.

2011

Ahmed, H.U., Hu, Y., Carter, T., Lecornet, E., Freeman, A., Hawkes, D.J., ...Emberton, M. (2011). Characterising Clinically Significant Prostate Cancer using Template Prostate Mapping Biopsy.. Journal of Urology, 186 (2), 458-464. doi:10.1016/j.juro.2011.03.147
Barratt, D.C., Hawkes, D.J. (2011). Image Registration and Fusion for Image-Guided Focal Ablation. In Ahmed, H.U., Arya, M., Carroll, P.R., Emberton, M. (Eds.), Focal Therapy in Prostate Cancer. (pp. 132-141). John Wiley & Sons.
Clarkson, M.J., Modat, M., Han, L., Ourselin, S., Hawkes, D.J., Alexander, D.C., ...Barrat, D. (2011). The UCL Centre for Medical Image Computing (CMIC): An integrated suite of open source software tools to support imaging research in Neurosciences, Oncology and Cardiovascular Sciences.
Cleary, J.O., Modat, M., Norris, F.C., Price, A.N., Jayakody, S.A., Martinez-Barbera, J.P., ...Scambler, P.J. (2011). Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping.. NEUROIMAGE, 54 (2), 769-778. doi:10.1016/j.neuroimage.2010.07.039
Daga, P., Winston, G., Modat, M., Cardoso, M.J., Stretton, J., Symms, M., ...Ourselin, S. (2011). Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients.
Daga, P., Winston, G., Modat, M., Cardoso, M., White, M., Mancini, L., ...Yousry, T. (2011). Improved neuronavigation through integration of intraoperative anatomical and diffusion images in an interventional MRI suite.
Daga, P., Winston, G., Modat, M., White, M., Mancini, L., Cardoso, M., ...Ourselin, S. (2011). Accurate localisation of optic radiation during neurosurgery in an interventional MRI Suite. IEEE Trans Med Imaging, doi:10.1109/TMI.2011.2179668
Hampshire, T., Roth, H., Hu, M., Boone, D., Slabaugh, G., Punwani, S., ...Hawkes, D. (2011). Automatic prone to supine haustral fold matching in CT colonography using a Markov random field model.. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2011, 508-515.
Hampshire, T., Roth, H., Hu, M., Boone, D., Slabaugh, G., Punwani, S., ...Hawkes, D. (2011). Automatic prone to supine haustral fold matching in CT colonography using a Markov random field model. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 6891 LNCS (PART 1), 508-515. doi:10.1007/978-3-642-23623-5_64
Han, L., HIPWELL, J., Mertzanidou, T., Carter, T., Modat, M., Ourselin, S., Hawkes, D. (2011). A HYBRID FEM-BASED METHOD FOR ALIGNING PRONE AND SUPINE IMAGES FOR IMAGE GUIDED BREAST SURGERY.
Hu, Y., Carter, T.J., Ahmed, H.U., Emberton, M., Allen, C., Hawkes, D.J., Barratt, D.C. (2011). Modelling prostate motion for data fusion during image-guided interventions.. IEEE TRANSACTIONS ON MEDICAL IMAGING, 30 (11), 1887-1900. doi:10.1109/TMI.2011.2158235
Jafar, Y., HIPWELL, J., Tanner, C., Melbourne, A., Hawkes, D. (2011). DISCRETISATION OF 3D DEFORMATION FIELDS: IMPLICATIONS FOR ESTABLISHING CORRESPONDENCE BETWEEN 2D X-RAY MAMMOGRAPHIC PROJECTIONS.
Jafar, Y., Hipwell, J., Tanner, C., Melbourne, A., Hawkes, D.J. (2011). Discretisation of 3D deformation fields: Implications for establishing correspondence between 2D X-ray mammographic projections. Proceedings - International Symposium on Biomedical Imaging, 1998-2001. doi:10.1109/ISBI.2011.5872803
Lecornet, E., Ahmed, H.U., Hu, Y., Moore, C.M., Nevoux, P., Barratt, D., ...Emberton, M. (2011). PERFORMANCE CHARACTERISTICS OF DIFFERENT TRANSRECTAL (TRB) AND TRANSPERINEAL MAPPING PROSTATE BIOPSY (TPB) STRATEGIES: A SIMULATION ON 96 CYSTOPROSTATECTOMY SPECIMENS (CPTS).
McClelland, J.R., Hughes, S., Modat, M., Qureshi, A., Ahmad, S., Landau, D.B., ...Hawkes, D.J. (2011). Inter-fraction variations in respiratory motion models.. PHYSICS IN MEDICINE AND BIOLOGY, 56 (1), 251-272. doi:10.1088/0031-9155/56/1/015
Melbourne, A., Cahill, N.D., Tanner, C., Hawkes, D.J., I.E.E.E. (2011). IMAGE REGISTRATION USING AN EXTENDABLE QUADRATIC REGULARISER.
Melbourne, A., Hipwell, J., Modat, M., Mertzanidou, T., Huisman, H., Ourselin, S., Hawkes, D.J. (2011). The effect of motion correction on pharmacokinetic parameter estimation in dynamic-contrast-enhanced MRI.. PHYSICS IN MEDICINE AND BIOLOGY, 56 (24), 7693-7708. doi:10.1088/0031-9155/56/24/001
Menys, A., Ahmed, A., Punwani, S., Odille, F., Steward, M., ATKINSON, D., ...Taylor, S.A. (2011). Quantified small bowel motility during MR enterography in Crohn’s disease as a marker of inflammatory activity..
Modat, M., Ridgway, G.R., Daga, P., Cardoso, M.J., Hawkes, D.J., Ashburner, J., Ourselin, S. (2011). Log-Euclidean free-form deformation.
Moore, C.M. (2011). Performances of template prostate mapping (tpm) versus transrectal ultrasound guided (TRUS) biopsies: an original computer simulation on cystoprostectomy specimens..
Pinto Pereira, S.M., McCormack, V.A., Hipwell, J.H., Record, C., Wilkinson, L.S., Moss, S.M., ...dos-Santos-Silva, I. (2011). Localized fibroglandular tissue as a predictor of future tumor location within the breast.. Cancer Epidemiol Biomarkers Prev, 20 (8), 1718-1725. doi:10.1158/1055-9965.EPI-11-0423
Rijkhorst, E.-.J., Rivens, I., Haar, G.T., Hawkes, D., Barratt, D. (2011). Effects of respiratory liver motion on heating for gated and model-based motion-compensated high-intensity focused ultrasound ablation.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, MICCAI 2011, PT I, 6891 605-+.
Rijkhorst, E.J., Rivens, I., Ter Haar, G., Hawkes, D., Barratt, D. (2011). Effects of respiratory liver motion on heating for gated and model-based motion-compensated high-intensity focused ultrasound ablation.
Roth, H.R., McClelland, J.R., Boone, D.J., Modat, M., Cardoso, M.J., Hampshire, T.E., ...Slabaugh, G.G. (2011). Registration of the endoluminal surfaces of the colon derived from prone and supine CT colonography. Medical Physics, 38 (6), 3077-3089. doi:10.1118/1.3577603
Tanner, C., White, M., Guarino, S., Hall-Craggs, M.A., Douek, M., Hawkes, D.J. (2011). Large breast compressions: Observations and evaluation of simulations. MEDICAL PHYSICS, 38 (2), 682-690. doi:10.1118/1.3525837
Thompson, S.A., Hu, M., Johnsen, S., Gurusamy, K., Davidson, B., Hawkes, D. (2011). Towards Image Guided Laparoscopic Liver Surgery, Defining the System Requirement.
Yang, G., Hipwell, J.H., Hawkes, D.J., Arridge, S.R. (2011). Unconstrained Simultaneous Scheme to Fully Couple Reconstruction and Registration for Digital Breast Tomosynthesis: A Feasible Study.
Yang, G., Hipwell, J.H., Tanner, C., Hawkes, D.J., Arridge, S.R. (2011). Alternating Reconstruction and Registration for Digital Breast Tomosynthesis.
Zhuang, X., Arridge, S., Hawkes, D.J., Ourselin, S. (2011). A nonrigid registration framework using spatially encoded mutual information and free-form deformations.. IEEE Trans Med Imaging, 30 (10), 1819-1828. doi:10.1109/TMI.2011.2150240
Zhuang, X., Shi, W., Duckett, S.G., Wang, H., Razavi, R., Hawkes, D.J., ...Ourselin, S. (2011). A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions..

2010

Allain, B., Hu, M., Lovat, L.B., Cook, R.J., Vercauteren, T., Ourselin, S., Hawkes, D.J. (2010). A system for biopsy site re-targeting with uncertainty in gastroenterology and oropharyngeal examinations..
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2010). ACCOUNTING FOR CHANGING OVERLAP IN VARIATIONAL IMAGE REGISTRATION.
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2010). Extending the Quadratic Taxonomy of Regularizers for Nonparametric Registration.
Han, L., Hipwell, J.H., Taylor, Z.A., Tanner, C., Ourselin, S., Hawkes, D.J. (2010). Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method..
Hu, M., Hawkes, D.J., Penney, G.P., Rueckert, D., Edwards, P.J., Bello, F., ...Casula, R. (2010). A ROBUST MOSAICING METHOD FOR ROBOTIC ASSISTED MINIMALLY INVASIVE SURGERY.
Hu, M., Penney, G., Rueckert, D., Edwards, P., Bello, F., Figl, M., ...Miao, Z. (2010). A Robust Mosaicing Method with Super-Resolution for Optical Medical Images.
Hu, M.X. (2010). Non-rigid reconstruction of the beating heart surface for minimally invasive cardiac surgery.
Hu, Y., Arumainayagam, N., Ahmed, H.U., Freeman, A., Hawkes, D., Emberton, M., Barratt, D. (2010). COMPARISON BETWEEN TRANSPERINEAL AND TRANSRECTAL BIOPSY FOR THE DETECTION OF PROSTATE CANCER TO GUIDE FOCAL THERAPY.
Hu, Y., Rijkhorst, E.-.J., Manber, R., Hawkes, D.J., Barratt, D.C. (2010). Deformable Vessel-Based Registration Using Landmark-Guided Coherent Point Drift..
Hu, Y., van den Boom, R., Carter, T., Taylor, Z., Hawkes, D., Ahmed, H.U., ...Barratt, D. (2010). A comparison of the accuracy of statistical models of prostate motion trained using data from biomechanical simulations.. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 103 (2-3), 262-272. doi:10.1016/j.pbiomolbio.2010.09.009
Jafar, Y.M., Hipwell, J.H., Tanner, C., Hawkes, D.J. (2010). Detection of Stable Mammographic Features under Compression using Simulated Mammograms.
Kumar, P., Thompson, S.A., Elhage, O., Challacombe, B.J., Penney, G., Hawkes, D. (2010). CLINICAL ASSESSMENT OF MRI GUIDED ROBOTIC RADICAL PROSTATECTOMY. JOURNAL OF ENDOUROLOGY, 24 A84.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2010). Data driven groupwise registration of diffusion weighted images.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2010). Data driven groupwise registration of diffusion weighted images..
Melbourne, A., Hipwell, J.H., Hawkes, D.J. (2010). The Effect of Motion Correction on Pharmacokinetic Parameter Estimation..
Melbourne, A., Ridgway, G., Hawkes, D.J. (2010). Image Similarity Metrics in Image Registration.
Mertzanidou, T., Hipwell, J.H., Cardoso, M.J., Tanner, C., Ourselin, S., Hawkes, D.J. (2010). X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification..
Mertzanidou, T., Hipwell, J.H., Tanner, C., Hawkes, D.J. (2010). An intensity-based approach to X-ray mammography - MRI registration.
Modat, M., Ridgway, G.R., Hawkes, D.J., Fox, N.C., Ourselin, S. (2010). Nonrigid registration with differential bias correction using normalised mutual information.
Modat, M., Ridgway, G.R., Taylor, Z.A., Lehmann, M., Barnes, J., Hawkes, D.J., ...Ourselin, S. (2010). Fast free-form deformation using graphics processing units.. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 98 (3), 278-284. doi:10.1016/j.cmpb.2009.09.002
Modat, M., Taylor, Z., Ridgway, G., Barnes, J., Wild, E., Hawkes, D.J., ...Ourselin, S. (2010). Nonlinear Elastic Spline Registration: Evaluation with Longitudinal Huntington’s Disease Data.
Modat, M., Vercauteren, T., Ridgway, G.R., Hawkes, D.J., Fox, N.C., Ourselin, S. (2010). Diffeomorphic demons using normalized mutual information, evaluation on multimodal brain MR images.
Pereira, S.M.P., Hipwell, J.H., McCormack, V.A., Tanner, C., Moss, S.M., Wilkinson, L.S., ...Kliger, C.J. (2010). Automated registration of diagnostic to prediagnostic x-ray mammograms: Evaluation and comparison to radiologists' accuracy. MED PHYS, 37 (9), 4530-4539. doi:10.1118/1.3457470
Pinto Pereira, S., McCormack, V., Hipwell, J., Record, C., Wilkinson, L., Moss, S., ...Silva, I. (2010). Do breast cancers arise in areas of the breast that pre-diagnostically had high mammographic density?.
Pinto Pereira, S.M., Hipwell, J.H., McCormack, V.A., Tanner, C., Moss, S.M., Wilkinson, L.S., ...Kliger, C.J. (2010). Automated registration of diagnostic to prediagnostic x-ray mammograms: Evaluation and comparison to radiologists' accuracy.. Medical physics, 37 (9), 4530-4539. doi:10.1118/1.3457470
Rijkhorst, E.-.J., Heanes, D., Odille, F., Hawkes, D.J., Barratt, D.C. (2010). Simulating Dynamic Ultrasound Using MR-derived Motion Models to Assess Respiratory Synchronisation for Image-Guided Liver Interventions..
Roth, H., McClelland, J., Boone, D., Hu, M., Ourselin, S., Slabaugh, G., ...Medicsight, P.L.C. (2010). Conformal Mapping of the Inner Colon Surface to a Cylinder for the Application of Prone to Supine Registration.
Roth, H., McClelland, J., Modat, M., Boone, D., Hu, M., Ourselin, S., ...Hawkes, D. (2010). Establishing spatial correspondence between the inner colon surfaces from prone and supine CT colonography..
Rueckert, D., Hawkes, D., Gerig, G., Yang, G.-.Z. (2010). Special Issue on the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2009. MEDICAL IMAGE ANALYSIS, 14 (5), 631-632. doi:10.1016/j.media.2010.06.008
Tanner, C., Carter, T., Hawkes, D., Szekely, G. (2010). Cylindrical Affine Transformation Model for Image Registration.
Tanner, C., Hipwell, J.H., Hawkes, D.J., Szekely, G. (2010). Breast Shapes on Real and Simulated Mammograms.
Yang, G., Hipwell, J.H., Clarkson, M.J., Tanner, C., Mertzanidou, T., Gunn, S., ...Arridge, S.R. (2010). Combined Reconstruction and Registration of Digital Breast Tomosynthesis.
Zhuang, X., Hawkes, D.J., Ourselin, S. (2010). Spatial Information Encoded Mutual Information for Nonrigid Registration..
Zhuang, X., Leung, K., Rhode, K., Razavi, R., Hawkes, D., Ourselin, S. (2010). Whole Heart Segmentation of Cardiac MRI Using Multiple Path Propagation Strategy.
Zhuang, X., Rhode, K.S., Razavi, R.S., Hawkes, D.J., Ourselin, S. (2010). A registration-based propagation framework for automatic whole heart segmentation of cardiac MRI.. IEEE Trans Med Imaging, 29 (9), 1612-1625. doi:10.1109/TMI.2010.2047112
Zhuang, X., Yao, C., Ma, Y., Hawkes, D.J., Penney, G.P., Ourselin, S. (2010). Registration-based propagation for whole heart segmentation from compounded 3D echocardiography..

2009

Allain, B., Hu, M.X., Lovat, L.B., Ourselin, S., Cook, R., Hawkes, D.J. (2009). Biopsy Site Re-localisation based on the Computation of Epipolar Lines from Two Previous Endoscopic Images.
Allain, B., Price, A., Vercauteren, T.K., Cook, R.J., Ourselin, S., Lythgoe, M.F., Hawkes, D.J. (2009). Precision of Confocal Miniprobe Localisation Assessed By High-Field Magnetic Resonance Imaging.
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2009). DEMONS ALGORITHMS FOR FLUID AND CURVATURE REGISTRATION.
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2009). A Demons Algorithm for Image Registration with Locally Adaptive Regularization.
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2009). A Demons algorithm for image registration with locally adaptive regularization.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 12 (Pt 1), 574-581.
Cahill, N.D., Schnabel, J.A., Noble, J.A., Hawkes, D.J. (2009). Overlap invariance of cumulative residual entropy measures for multimodal image alignment.
Carter, T.J., Tanner, C., Hawkes, D.J. (2009). Determining material properties of the breast for image-guided surgery.
Hawkes, D.J., Hu, Y., Ahmed, H.U., Emberton, M., Barratt, D. (2009). Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2009. Springer.
Hill, D.L.G., Hawkes, D.J. (2009). Across-modality registration using intensity-based cost functions. .
Hughes, S., Boutland, J., Adams, M., McClelland, J., Deehan, C., Hawkes, D., Landau, D. (2009). A study to find a suitable fiducial marker to validate the use of non-rigid registration (NRR) algorithms and 4D-CT motion modelling in lung cancer radiotherapy. LUNG CANCER, 63 S34. doi:10.1016/S0169-5002(09)70103-5
Hughes, S., McClelland, J., Tarte, S., Lawrence, D., Ahmad, S., Hawkes, D., Landau, D. (2009). Assessment of two novel ventilatory surrogates for use in the delivery of gated/tracked radiotherapy for non-small cell lung cancer. RADIOTHERAPY AND ONCOLOGY, 91 (3), 336-341. doi:10.1016/j.radonc.2009.03.016
Hu, M., Penney, G.P., Rueckert, D., Edwards, P.J., Bello, F., Casula, R., ...Hawkes, D.J. (2009). Non-rigid Reconstruction of the Beating Heart Surface for Minimally Invasive Cardiac Surgery.
Hu, Y., Ahmed, H.U., Allen, C., Pendse, D., Sahu, M., Emberton, M., ...Barratt, D. (2009). MR to Ultrasound Image Registration for Guiding Prostate Biopsy and Interventions.
Hu, Y., Ahmed, H.U., Allen, C., Pendsé, D., Sahu, M., Emberton, M., ...Barratt, D. (2009). MR to ultrasound image registration for guiding prostate biopsy and interventions..
Karssemeijer, N., Huisman, H., Hawkes, D., Hipwell, J., Boehler, T., Lesniak, J., ...Hahn, H. (2009). INTEGRATING BIOLOGICAL KNOWLEDGE, NOVEL IMAGING MODALITIES, AND MODELING IN BREAST CANCER DIAGNOSIS.
King, A.P., Boubertakh, R., Rhode, K.S., Ma, Y.L., Chinchapatnam, P., Gao, G., ...Gill, J.S. (2009). A subject-specific technique for respiratory motion correction in image-guided cardiac catheterisation procedures. MEDICAL IMAGE ANALYSIS, 13 (3), 419-431. doi:10.1016/j.media.2009.01.003
Melbourne, A., Collins, D.J., Leach, M.O., Koh, D.-.M., Hawkes, D.J., Atkinson, D. (2009). Contrast Enhanced Image Registration using Kullbach-Leibler Assisted Image Matching and Patching (KLAMP).
Melbourne, A., Hawkes, D.J., Atkinson, D. (2009). Image registration using uncertainty coefficients.
Melbourne, A., Orton, M., Collins, D.J., Koh, D.-.M., Leach, M.O., Hawkes, D.J., Atkinson, D. (2009). The effect of image registration on pharmacokinetic parameter extraction using 3D DCE-MRI.
Miyazaki, K., Orton, M.R., Koh, D.-.M., Lewington, V., Atkinson, D., Hawkes, D.J., ...Collins, D.J. (2009). Evaluation of slope-based hepatic perfusion index quantification methods against dual-input kinetic model based approach.
Miyazaki, K., Orton, M.R., Lewington, V., Atkinson, D., Hawkes, D.J., Leach, M.O., Collins, D.J. (2009). Hepatic perfusion quantification using a dual-input kinetic model with a novel portal venous estimation method: Evaluation against other model- and slope-based perfusion quantification approaches.
Modat, M., Ridgway, G.R., Taylor, Z.A., Hawkes, D.J., Fox, N.C., Ourselin, S. (2009). A parallel-friendly normalized mutual information gradient for free-form registration.
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2009). Onset estimation for dual input DCE-MRI liver data : information criteria used to determine statistical optimality of global or pixel-wise onset estimation.
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2009). Novel method of portal delay and dispersion estimation for dual-input kinetic modelling of DCE-MRI liver data.
Orton, M.R., Miyazaki, K., Koh, D.-.M., Collins, D.J., Hawkes, D.J., Atkinson, D., Leach, M.O. (2009). Optimizing Functional Parameter Accuracy for Breath-hold DCE-MRI of Liver Tumours. Physics in Medicine and Biology, 54 (7), 2197-2215. doi:10.1088/0031-9155/54/7/023
Papastavrou, Y., Cash, D., Hawkes, D., Hutton, B. (2009). A Multi-component similarity measure for improved robustness of non-rigid registration of combined FDG PET-CT head and neck images.
Punwani, S., Halligan, S., Tolan, D., Taylor, S.A., Hawkes, D. (2009). Quantitative assessment of colonic movement between prone and supine patient positions during CT colonography.. BRITISH JOURNAL OF RADIOLOGY, 82 (978), 475-481. doi:10.1259/bjr/91937173
Siewerdsen, J., Hawkes, D., Keall, P. (2009). WE‐E‐303A‐01: Image‐Guided Therapies: Advances in Imaging, Modeling, and New Applications.
Tanner, C., Hipwell, J.H., Hawkes, D.J. (2009). Using statistical deformation models for the registration of multimodal breast images. Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 7259 doi:10.1117/12.811631
Tanner, C., White, M., Guarino, S., Hall-Craggs, M.A., Douek, M., Hawkes, D.J. (2009). Anisotropic Behaviour of Breast Tissue for Large Compressions.
Taylor, Z.A., Comas, O., Cheng, M., Passenger, J., Hawkes, D.J., Atkinson, D., Ourselin, S. (2009). On modelling of anisotropic viscoelasticity for soft tissue simulation: numerical solution and GPU execution.. Medical Image Analysis, 13 (2), 234-244. doi:10.1016/j.media.2008.10.001
Thompson, S.A., Penney, G., Carter, T., Dasgupta, P., Hawkes, D. (2009). Accuracy Analysis of an Image Guided Robotic Urology Surgery System.
Thompson, S.A., Penney, G., Dasgupta, P., Hawkes, D. (2009). Image Guidance in Robot Assisted Prostatectomy.
White, M.J., Hawkes, D.J., Melbourne, A., Collins, D.J., Coolens, C., Hawkins, M., ...Atkinson, D. (2009). Motion artefact correction in free-breathing abdominal MRI using overlappingpartial samples to recover image deformations. Magnetic Resonance in Medicine, 62 (2), 440-449. doi:10.1002/mrm.22017
Zhuang, X., Hawkes, D.J., Ourselin, S. (2009). Unifying encoding of spatial information in mutual information for nonrigid registration.
Zhuang, X., Rhode, K., Razavi, R., Hawkes, D.J., Ourselin, S. (2009). Free-Form Deformations Using Adaptive Control Point Status for Whole Heart MR Segmentation.

2008

Barratt, D.C., Chan, C.S.K., Edwards, P.J., Penney, G.P., Slomczykowksy, M., Carter, T.J., Hawkes, D.J. (2008). Instantiation and registration of statistical shape models of the femur and pelvis using 3D ultrasound imaging. Medical Image Analysis, 12 (3), 358-374. doi:10.1016/j.media.2007.12.006
Cahill, N.D., Schnabel, J.A., Noble, J.A., Hawkes, D.J. (2008). Revisiting Overlap Invariance in Medical Image Alignment.
Carter, T.J., Tanner, C., Barratt, D.C., Beechey-Newman, N., Hawkes, D.J. (2008). MR Navigated Breast Surgery: Method and Initial Clinical Experience.
Carter, T., Tanner, C., Beechey-Newman, N., Barratt, D., Hawkes, D. (2008). MR navigated breast surgery: Method and initial clinical experience.
Chandler, A.G., Pinder, R.J., Netsch, T., Schnabel, J.A., Hawkes, D.J., Hill, D.L.G., Razavi, R. (2008). Correction of misaligned slices in multi-slice cardiovascular magnetic resonance using slice-to-volume registration. JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE, 10 doi:10.1186/1532-429X-10-13
Colgan, R., McClelland, J., McQuaid, D., Evans, P.M., Hawkes, D., Brock, J., ...Webb, S. (2008). Planning lung radiotherapy using 4D CT data and a motion model. PHYSICS IN MEDICINE AND BIOLOGY, 53 (20), 5815-5830. doi:10.1088/0031-9155/53/20/017
Figl, M., Rueckert, D., Hawkes, D., Casula, R., Hu, M., Pedro, O., ...Edwards, P. (2008). Augmented reality image guidance for minimally invasive coronary artery bypass.
Figl, M., Rueckert, D., Hawkes, D., Casula, R., Hu, M., Pedro, O., ...Edwards, P. (2008). Image guidance for robotic minimally invasive coronary artery bypass.
Gao, G., Tarte, S., King, A., Ma, Y., Chinchapatnam, P., Schaeffter, T., ...Rhode, K. (2008). Validation of the use of photogrammetry to register preprocedure MR images to intra-procedure patient position for image-guided cardiac catheterization procedures - art. no. 69181Q.
Greenhalgh, R., Hu, Y., Barratt, D., Tolan, D., Taylor, S.A., Hawkes, D., Halligan, S. (2008). Can Us elastography help characterise anal sphincter pathology?.
Hawkes, D., Barratt, D., Carter, T., McClelland, J., Crum, B. (2008). Nonrigid registration. In Image-Guided Interventions: Technology and Applications. (pp. 193-218). .
Hipwell, J., Tanner, C., Crum, W.R., Schnabel, J., Hawkes, D.J. (2008). A new validation method for validation of X-ray Mammogram Registration Algorithms using a Projection Model of Breast X-ray Compression. IEEE Transactions on Medical Imaging, 26 1190-1200. doi:10.1088/0031-9155/52/16/007
Hipwell, J., Tanner, C., Crum, W.R., Schnabel, J., Hawkes, D.J. (2008). A new validation method for validation of X-ray Mammogram Registration Algorithms using a Projection Model of Breast X-ray Compression. IEEE Transactions on Medical Imaging, 26 1190-1200. doi:10.1088/0031-9155/52/16/007
Hughes, S., McClelland, J., Chandler, A., Adams, M., Boutland, J., Withers, D., ...Hawkes, D. (2008). A comparison of internal target volume definition by limited four-dimensional computed tomography, the addition of patient-specific margins, or the addition of generic margins when planning radical radiotherapy for lymph node-positive non-small cell lung cancer. CLINICAL ONCOLOGY, 20 (4), 293-300. doi:10.1016/j.clon.2007.12.004
Hu, M., Penney, G., Rueckert, D., Edwards, P., Figl, M., Pratt, P., Hawkes, D. (2008). A novel algorithm for heart motion analysis based on geometric constraints.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2008, PT I, PROCEEDINGS, 5241 720-+.
Hu, M.X. (2008). Image Guidance for Robotic Minimally Invasive Coronary Artery Bypass.
Hu, Y., Morgan, D., Ahmed, H.U., Pendsé, D., Sahu, M., Allen, C., ...Barratt, D. (2008). A statistical motion model based on biomechanical simulations for data fusion during image-guided prostate interventions.
Hu, Y., Morgan, D., Ahmed, H.U., Pendse, D., Sahu, M., Allen, C., ...Barratt, D. (2008). Modelling prostate gland motion for image-guided interventions.
Hu, Y., Morgan, D., Ahmed, H.U., Pendsé, D., Sahu, M., Allen, C., ...Barratt, D. (2008). A statistical motion model based on biomechanical simulations for data fusion during image-guided prostate interventions..
Hu, Y., Morgan, D., Ahmed, H.U., Pendsé, D., Sahu, M., Allen, C., ...Barratt, D.C. (2008). Modelling Prostate Gland Motion for Image-Guided Interventions..
Kashani, R., Hub, M., Balter, J.M., Kessler, M.L., Dong, L., Zhang, L., ...Schnabel, J.A. (2008). Objective assessment of deformable image registration in radiotherapy: A multi-institution study. MEDICAL PHYSICS, 35 (12), 5944-5953. doi:10.1118/1.3013563
Kashani, R., Hub, M., Balter, J.M., Kessler, M.L., Dong, L., Zhang, L., ...Schnabel, J.A. (2008). Objective assessment of deformable image registration in radiotherapy: A multi-institution study. Medical Physics, 35 (12), 5944-5953. doi:10.1118/1.3013563
King, A.P., Boubertakh, R., Ng, K.L., Ma, Y.L., Chinchapatnam, P., Gao, G., ...Rhode, K.S. (2008). A technique for respiratory motion correction in image guided cardiac catheterisation procedures.
Mang, A., Schnabel, J.A., Crum, W.R., Modat, M., Camara-Rey, O., Palm, C., ...Buzug, T.M. (2008). Consistency of parametric registration in serial MRI studies of brain tumor progression. International Journal of Computer Assisted Radiology and Surgery, 3 201---211.
Ma, Y.L., Rhode, K.S., Gao, G., King, A.P., Chinchapatnam, P., Schaeffter, T., ...Penney, G.P. (2008). Ultrasound calibration using intensity-based image registration: For application in cardiac catheterization procedures.
Mcclelland, J., Gao, G., Tarte, S., Blackall, J., Hughes, S., Ahmad, S., ...Hawkes, D. (2008). TH‐D‐332‐07: Removing Artifacts From 4DCT Volumes Acquired in Cine Mode Using B‐Spline Non‐Rigid Registrations.
Melbourne, A., Atkinson, D., Hawkes, D.J. (2008). Influence of Organ Motion and Contrast Enhancement on Successful Registration.
Melbourne, A., Hawkes, D.J., Atkinson, D. (2008). Non-Rigid Registration of Diffusion Weighted MRI using Progressive Principal Component Registration.
Miyazaki, K., Collins, D.J., Koh, D.-.M., Atkinson, D., Hawkes, D.J., Leach, M.O. (2008). Evaluation of quantitative dynamic contrast enhanced pharmacokinetic parameters with and without postprocessing.
Orton, M.R., Collins, D.J., Hawkes, D.J., Atkinson, D., Leach, M.O. (2008). Effect of Image Acquisition Protocol on Vascular Parameter Estimates from DCE-MRI Liver Data.
Orton, M.R., Collins, D.J., Walker-Samuel, S., d'Arcy, J.A., Hawkes, D.J., Atkinson, D., Leach, M.O. (2008). Bayesian estimation of pharmacokinetic parametersfor DCE-MRI with a robust treatment of enhancement onset time. Physics in Medicine and Biology, 52 (9), 2393-2408. doi:10.1088/0031-9155/52/9/005
Orton, M.R., d'Arcy, J.A., Collins, D.J., Atkinson, D., Hawkes, D.J., Leach, M.O. (2008). Portal Delay Estimation from DCE-MRI Liver Tissue Data: Feasibility and Effect on Vascular Parameter Estimates.
Orton, M.R., d'Arcy, J.A., Walker-Samuel, S., Hawkes, D.J., Atkinson, D., Collins, D.J., Leach, M.O. (2008). Computationally efficient vascular input function models for quantitative kinetic modelling using DCE-MRI. Physics in Medicine and Biology, 53 (5), 1225-1239. doi:10.1088/0031-9155/53/5/005
Orton, M.R., d'Arcy, J.A., Walker-Samuel, S., Hawkes, D.J., Atkinson, D., Collins, D.J., Leach, M.O. (2008). Computationally efficient vascular input function models for quantitative kinetic modelling using DCE-MRI.. Physics in medicine and biology, 53 (5), 1225-1239. doi:10.1088/0031-9155/53/5/005
Palm, C., Penney, G.P., Crum, W.R., Schnabel, J.A., Pietrzyk, U., Hawkes, D.J. (2008). Fusion of rat brain histology and MRI using weighted multi-image mutual information.
Penney, G.P., Griffin, L.D., King, A.P., Hawkes, D.J. (2008). A novel framework for multi-modal intensity-based similarity measures based on internal similarity.
Punwani, S., Robinson, C., Hawkes, D., Taylor, S.A., Halligan, S. (2008). Quantitative assessment of colonic movement between prone and supine patient positions during CTC.
Rhode, K., Ma, Y., Chandrasena, A., King, A., Gao, G., Chinchapatnam, P., ...Gill, J. (2008). Evaluation of the use of multimodality skin markers for the registration of pre-procedure cardiac MR images and intra-procedure x-ray fluoroscopy images for image guided cardiac electrophysiology procedures.
Silberberg, Y.R., Pelling, A.E., Yakubov, G.E., Crum, W.R., Hawkes, D.J., Horton, M.A. (2008). Tracking displacements of intracellular organelles in response to nanomechanical forces.
Silberberg, Y.R., Pelling, A.E., Yakubov, G.E., Crum, W.R., Hawkes, D.J., Horton M, A. (2008). Mitochondrial displacements in response to nanomechanical forces. Journal of Molecular Recognition, 21 (1), 30-36. doi:10.1002/jmr.868
Taylor, Z.A., Comas, O., Cheng, M., Passenger, J., Hawkes, D.J., Atkinson, D., Ourselin, S. (2008). Modelling anisotropic viscoelasticity for real-time soft tissue simulation.
Thompson, S.A., Penney, G.P., Hawkes, D.J., Dasgupta, P. (2008). Bone segmentation using a CT based statistical shape model for image guidance in robot assisted prostatectomy.
Thompson, S., Penney, G., Buie, D., Dasgupta, P., Hawkes, D. (2008). Use of a CT statistical deformation model for multi-modal pelvic bone segmentation..
Thompson, S., Penney, G., Dasguipa, P., Hawkes, D. (2008). Image guidance in robot assisted radical prostatectomy. EUROPEAN UROLOGY SUPPLEMENTS, 7 (3), 104. doi:10.1016/S1569-9056(08)60134-7
Waechter, I., Barratt, D.C., Hawkes, D.J., Bredno, J., Weese, J. (2008). Quantifying blood flow division at bifurcations from rotational angiography.
Waechter, I., Bredno, J., Hermans, R., Barratt, D., Weese, J., Hawkes, D. (2008). Evaluation of model-based blood flow quantification from rotational angiography.
Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Model-based blood flow quantification from rotational angiography.. MEDICAL IMAGE ANALYSIS, 12 (5), 586-602. doi:10.1016/j.media.2008.06.003
Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Evaluation of model-based blood flow quantification from rotational angiography.
Waechter, I., Bredno, J., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Using flow information to support 3D vessel reconstruction from rotational angiography.. Medical physics, 35 (7Part1), 3302-3316. doi:10.1118/1.2938729
Waechter, I., Bredno, J., Weese, J., Barratt, D.C., Hawkes, D.J. (2008). Using flow information to support 3D vessel reconstruction from rotational angiography.. MEDICAL PHYSICS, 35 (7), 3302-3316. doi:10.1118/1.2938729
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in free-breathing liver MRI.
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in freebreathing.
White, M.J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., ...Hawkes, D.J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in free-breathing liver MRI.
Zhuang, X., Hawkes, D.J., Crum, W.R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation.
Zhuang, X., Hawkes, D.J., Crum, W.R., Boubertakh, R., Uribe, S., Atkinson, D., ...Hill, D.L.G. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation.
Zhuang, X., Rhode, K., Arridge, S., Razavi, R., Hill, D., Hawkes, D.J., Ourselin, S. (2008). An atlas-based segmentation propagation framework using locally affine registration – Application to automatic whole heart segmentation.

2007

Blackall, J., McClelland, J., Tarte, S., Miguel, M., Uribe, S., Schaeffter, T., Hawkes, D. (2007). MR-based 4d models of respiratory motion variability for use in adaptive RT of the lung.
Cahill, N.D., Noble, J.A., Hawkes, D.J. (2007). Fourier methods for nonparametric image registration.
Cahill, N.D., Noble, J.A., Hawkes, D.J., Ray, L.A. (2007). Fast fluid registration with Dirichlet boundary conditions: A transform-based approach.
Chinchapatnam, P.P., Rhode, K.S., King, A., Gao, G., Ma, Y., Schaeffter, T., ...Arridge, S. (2007). Anisotropic wave propagation and apparent conductivity estimation in a fast electrophysiological model: Application to XMR interventional imaging.
Chinchapatnam, P., Rhode, K.S., King, A.P., Gao, G., Ma, Y., Schaeffter, T., ...Arridge, S.R. (2007). Anisotropic wave propagation and apparent conductivity estimation in a fast electrophysiological model: Application to XMR interventional imaging.
Crum, W.R., Camara, O., Hawkes, D.J. (2007). Methods for inverting dense displacement fields: Evaluation in brain image registration.
Crum, W.R., Camara, O., Hawkes, D.J. (2007). Methods for inverting dense displacement fields: evaluation in brain image registration.. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2007, PT 1, PROCEEDINGS, 4791 900-+.
Hawkes, D.J., Penney, G.P., Atkinson, D., Barratt, D., Blackall, J., Carter, T., ...S, W. (2007). MOTION AND BIOMECHANICAL MODELS FOR IMAGE GUIDED INTERVENTIONS.
Hawkes, D., Nielsen, M. (2007). Untitled. MEDICAL IMAGE ANALYSIS, 11 (5), 415-416. doi:10.1016/j.media.2007.07.003
Hipwell, J.H., Tanner, C., Crum, W.R., Schnabel, J.A., Hawkes, D.J. (2007). A new validation method for validation of x-ray mammogram registration algorithms using a projection model of breast x-ray compression. IEEE Transactions on Medical Imaging, 26 (7), 1190-1200.
Hu, M., Penney, G., Edwards, P., Figl, M., Hawkes, D. (2007). 3D reconstruction of internal organ surfaces for minimal invasive surgery.
Hu, M.X. (2007). 3D Reconstruction of Internal Organ Surfaces for Minimal Invasive Surgery.
Kashani, R., Baiter, J., Kessler, M., Hub, M., Dong, L., Zhang, L., ...Schnabel, J. (2007). Objective assessment of deformable image registration in radiotherapy - a multi-institution study.
Mang, A., Camara, O., Brasil-Caseiras, G., Crum, W.R., Schnabel, J.A., Buzugl, T.M., ...Hawkes, D.J. (2007). Registration of RCBV and ADC maps with structural and physiological MR images in glioma patients: Study and validation.
Mang, A., Camara, O., Caseiras, G.B., Crum, W.R., Schnabel, J.A., Buzug, T.M., ...Hawkes, D.J. (2007). Image registration of structural and physiological MR images of abnormal anatomy.
Mang, A., Crum, W.R., Camara, O., Schnabel, J.A., Caseiras, G.B., Buzug, T.M., ...Hawkes, D.J. (2007). Modelling tumour growth patterns with non-rigid image registration.
McClelland, J., Blackall, J., Tarte, S., Hughes, S., Hawkes, D. (2007). Non-rigid registration based respiratory motion models of the lung using two parameters.
McClelland, J.R., Webb, S., McQuaid, D., Binnie, D.M., Hawkes, D.J. (2007). Tracking 'differential organ motion' with a 'breathing' multileaf collimator: magnitude of problem assessed using 4D CT data and a motion-compensation strategy. PHYSICS IN MEDICINE AND BIOLOGY, 52 (16), 4805-4826. doi:10.1088/0031-9155/52/16/007
Melbourne, A., Atkinson, D., White, M.J., Collins, M., Leach, M., Hawkes, D. (2007). Registration of dynamic contrast-enhanced MRI using a progressive principal component registration (PPCR). Physics in Medicine and Biology, 52 (17), 5147-5156. doi:10.1088/0031-9155/52/17/003
Melbourne, A., Atkinson, D., White, M.J., Hawkes, D.J., Collins, D., Leach, M. (2007). Contrast-enhancement simulation using principal components for registration of Dynamic Contrast-Enhanced MRI.
Melbourne, A., Atkinson, D., White, M.J., Hawkes, D.J., Collins, D., Leach, M. (2007). Using Registration to Quantify the Consistency of Whole Liver Position during Patient Breath-hold in Dynamic Contrast-Enhanced MRI.
Miyazaki, K., d'Arcy, J.A., Atkinson, D., Hawkes, D., Koh, D.-.M., Leach, M.O., Collins, D.J. (2007). Correcting Artifacts in High Temporal- and Spatial-Resolution Dynamic Abdominal Studies Using UNFOLD: A Potential Tool for Improving Perfusion Quantification of DCE-MR Investigations.
Penney, G.P., Edwards, P.J., Hipwell, J.H., Slomczykowski, M., Revie, I., Hawkes, D.J. (2007). Postoperative calculation of acetabular cup position using 2-D-3-D registration. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 54 (7), 1342-1348. doi:10.1109/TBME.2007.890737
Tanner, C., Schnabel, J.A., Degenhard, A., Hall-Craggs, M.A., Usiskin, S.I., Leach, M.O., ...Hawkes, D.J. (2007). Quantitative evaluation of free-form deformation registration for dynamic contrast-enhanced MR mammography.. Medical Physics, 34 (4), 1221-1233.
Waechter, I., Bredno, J., Barratt, D.C., Weese, J., Hawkes, D.J. (2007). Quantification of blood flow from rotational angiography.
Waechter, I., Bredno, J., Barratt, D., Weese, J., Hawkes, D. (2007). Quantification of Blood Flow from Rotational Angiography.
Webb, S., McClelland, J., Hawkes, D., Binnie, D. (2007). Tracking "Differential Organ Motion" with a "Breathing" multileaf collimator: Magnitude of problem assessed using 4D CT data and a motion-compensation strategy.
White, M.J., Atkinson, D., Batchelor, P.G., Crum, W.R., Uribe, S., Schaeffter, T., ...Hawkes, D.J. (2007). Reducing Artefacts by Inverting the Effects of Non-Rigid Motion During a Free-Breathing Liver Scan.
White, M.J., Atkinson, D., Crum, W.R., Uribe, S., Schaeffler, T., Collins, D., ...Hawkes, D.J. (2007). Reducing artefacts by inverting the effects of non-rigid motion during a free-breathing liver scan.

2006

Ahmad, S., Tarte, S., Withers, D., Hawkes, D., Blackall, J., Landau, D., ...Adams, M. (2006). Comparison of patient-specific and generic internal target volume (ITV) margins for planning radical radiotherapy in lymph-node positive non-small cell lung cancer (NSCLC).
Barratt, D.C., Penney, G.P., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2006). Self-Calibrating 3D-Ultrasound-Based Bone Registration for Minimally Invasive Orthopaedic Surgery. IEEE Transactions on Medical Imaging, 25 (3), 312-323. doi:10.1109/TMI.2005.862736
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Ultrasound-based registration for minimally-invasive orthopaedic surgery.
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Recent Developments in Ultrasound-based Bone Registration.
Barratt, D.C., Penney, G.P., Slomczykowski, M., Hawkes, D.J. (2006). Recent Developments in Ultrasound-based Bone Registration.
Blackall, J., Ahmad, S., Miquel, M., McClelland, J., Landau, D., Hawkes, D. (2006). MRI-Based Measurements of Respiratory Motion Variability and Assessment of Imaging Strategies for Radiotherapy Planning. Physics in Medicine and Biology, 51 (17), 4147-4169.
Blackall, J.M., Ahmad, S., Miquel, M.E., McClelland, J.R., Landau, D.B., Hawkes, D.J. (2006). MRI-based measurements of respiratory motion variability and assessment of imaging strategies for radiotherapy planning. PHYSICS IN MEDICINE AND BIOLOGY, 51 (17), 4147-4169. doi:10.1088/0031-9155/51/17/003
Carter, T.J., Tanner, C., Crum, W.R., Hawkes, D.J. (2006). Prone-Supine Breast MR Image Registration for Image-Guided Surgery.
Carter, T.J., Tanner, C.C., W R, B.-.N., N, H., D, J. (2006). A Framework for Image-Guided Breast Surgery.
Chandler, A.G., Pinder, R.J., Netsch, T., Schnabel, J.A., Hawkes, D.J., Hill, D.L.G., ......I.E.E.E. (2006). Correction of misaligned slices in multi-slice MR cardiac examinations by using slice-to-volume registration.
Hipwell, J.H., Tanner, C., Crum, W.R., Hawkes, D.J. (2006). X-ray mammogram registration: A novel validation method.
Hipwell, J.H., Tanner, C., Crum, W.R., Hawkes, D.J. (2006). A new validation method for establishing correspondence between pairs of X-ray mammograms. Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2006 doi:10.1109/CVPRW.2006.143
McClelland, J., Blackall, J., Tarte, S., Chandler, A., Hughes, S., Ahmad, S., ...Hawkes, D. (2006). A Continuous 4D Motion Model from Multiple Respiratory Cycles for use in Lung Radiotherapy. Medical Physics, 33 (9), 3348-3358. doi:10.1118/1.2222079
McClelland, J., Hughes, S., Ahmad, S., Chandler, A., Blackall, J., Tarte, S., ...Hawkes, D. (2006). Comparing breathhold and free breathing CT derived motion models for predicting respiratory motion of lung cancer and lymph nodes.
McClelland, J.R., Blackall, J.M., Tarte, S., Chandler, A.C., Hughes, S., Ahmad, S., ...Hawkes, D.J. (2006). A continuous 4D motion model from multiple respiratory cycles for use in lung radiotherapy. MEDICAL PHYSICS, 33 (9), 3348-3358. doi:10.1118/1.2222079
Miyazaki, K., Walker-Samual, S., Knowles, B.R., Taylor, N.J., Padhani, A.R., Wallace, T., ...Atkinson, D. (2006). Parametric DCE-MRI HPI Maps - A Qualitative and Quantitative Analysis in Phase I Clinical Trial Patients with Liver Metastases.
Papastavrou, Y., Hutton, B., Hawkes, D. (2006). Non-rigid registration of combned PET-CT jhead and neck images to place the information within a common anatomical framework..
Penney, G.P., Barratt, B.C., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2006). Cadaver Validation of intensity-based ultrasound to CT registration. Medical Image Analysis, 10 (3), 385-395. doi:10.1016/j.media.2006.01.003
Tanner, C., Carter, T.J., Hawkes, D.J. (2006). 3D Rezoning for Finite Element Modelling of Large Breast Deformations.
Tanner, C., Khazen, M., Kessar, P., Leach, M.O., Hawkes, D.J. (2006). Does Registration Improve the Performance of a Computer Aided Diagnosis System for Dynamic Contrast-Enhanced MR Mammography?.
Tanner, C., Schnabel, J.A., Leach, M.O., Hose, D.R., Hill, D.L.G., Hawkes, D.J. (2006). Factors Influencing the Accuracy of Biomechanical Breast Models.. Medical Physics, 33 (6), 1758-1769.
Tarte, S., McClelland, J., Hughes, S., Blackall, J., Landau, D., Hawkes, D. (2006). A non-contact method for the acquisition of breathing signals that enable distinction between abdominal and thoracic breathing.
Waechter, I., Bredno, J., Weese, J., Hawkes, D. (2006). Using flow information to support 3D vessel reconstruction from rotational angiography.
White, M.J., Atkinson, D., Collins, D., Leach, M.O., Hawkes, D.J. (2006). Parameterized modelling of liver deformation during free.

2005

Ahmad, S., McClelland, J., Chandler, A., Blackall, J., Hughes, S., Hawkes, D. (2005). Movement of tumour and mediastinal lymph nodes with respiration in patients with non small cell lung cancer (NSCLC).
Ahmad, S., McClelland, J., Chandler, A., Blackall, J., Landau, D., Hawkes, D. (2005). The implementation of 4D CT using a novel respiratory motion modelling technique to aid radiotherapy planning in patients with non-small cell lung cancer.
Aylward, S.R., Cleary, K.R., Hawkes, D.J. (2005). Intraoperative image processing for surgical guidance. IEEE TRANS MED IMAGING, 24 (278-0062 (Print), 11), 1401-1404.
Barratt, D.C., Penney, G.P., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2005). Self-calibrating ultrasound-to-CT bone registration.
Blackall, J.M., Penney, G.P., King, A.P., Hawkes, D.J. (2005). Alignment of sparse freehand 3-D ultrasound with preoperative images of the liver using models of respiratory motion and deformation. IEEE TRANS MED IMAGING, 24 (11), 1405-1416. doi:10.1109/TMI.2005.856751
Blackall, J.M., Penney, G.P., King, A.P., Hawkes, D.J. (2005). Alignment of Sparse Freehand 3D Ultrasound with Preoperative Images of the Liver and an Interventional Plan Using Models of Respiratory Motion and Deformation. IEEE Transactions on Medical Imaging, 24 1405-1416.
Carter, T.J., Sermesant, M., Cash, D.M., Barratt, D.C., Tanner, C., Hawkes, D.J. (2005). Application of soft tissue modelling to image-guided surgery. Medical Engineering and Physics, 27 (350-4533 (Print), 10), 893-909.
Crum, W.R., Tanner, C., Hawkes, D.J. (2005). Anisotropic multi-scale fluid registration: evaluation in magnetic resonance breast imaging. Physics in Medicine and Biology, 50 (21), 5153-5174. doi:10.1088/0031-9155/50/21/014
Edwards, P.J., Nijmeh, A.D., McGurk, M., Odell, E., Fenlon, M.R., Marsden, P.K., Hawkes, D.J. (2005). Validation of PET imaging by alignment to histology slices.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 8 (Pt 2), 968-975.
Edwards, P.J., Nijmeh, A.D., McGurk, M., Odell, E., Fenlon, M.R., Marsden, P.K., Hawkes, D.J. (2005). Validation of PET imaging by alignment to histology slices.
Hawkes, D., Barratt, D., Blackall, J., Chandler, A., McClelland, J., Penney, G. (2005). Computational models in image guided interventions.. 2005 27TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY, VOLS 1-7, 7246-7249. doi:10.1109/IEMBS.2005.1616183
Hawkes, D.J., Barratt, D., Blackall, J.M., Chan, C., Edwards, P.J., Rhode, K., ...Hill, D.L. (2005). Tissue deformation and shape models in image-guided interventions: a discussion paper. MED IMAGE ANAL, 9 (2), 163-175. doi:10.1016/j.media.2004.11.007
Manzke, R., Koken, P., Hawkes, D., Grass, M. (2005). Helical cardiac cone beam CT reconstruction with large area detectors: a simulation study.. Physics in Medicine and Biology, 50 (7), 1547-1568.
McClelland, J., Blackall, J., Hughes, S., Ahmad, S., Landau, D., Hawkes, D. (2005). 4D models of respiratory motion for use in RT planning and their advantages over 4DCT techniques.
MCCLELLAND, J., Chandler, A.G., Blackall, J.M., Ahmad, S., Landau, D., Hawkes, D.J. (2005). 4D Motion Models over the Respiratory Cycle for use in Lung Cancer Radiotherapy Planning.
McLaughlin, R.A., Hipwell, J., Hawkes, D.J., Noble, J.A., Byrne, J.V., Cox, T.C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE TRANSACTIONS ON MEDICAL IMAGING, 24 (8), 1058-1066. doi:10.1109/TMI.2005.852067
McLaughlin, R.A., Hipwell, J., Hawkes, D.J., Noble, J.A., Byrne, J.V., Cox, T.C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE TRANS MED IMAGING, 24 (278-0062 (Print), 8), 1058-1066.
Nijmeh, A.D., Goodger, N.M., Hawkes, D., Edwards, P.J., McGurk, M. (2005). Image-guided navigation in oral and maxillofacial surgery.. British Journal of Oral and Maxillofacial Surgery, 43 (4), 294-302. doi:10.1016/j.bjoms.2004.11.018
Panalkis, N., McClelland, J., Chandler, A., Blackall, J., Ahmad, S., Hughes, S., ...Brada, M. (2005). Intrafractional movement of the oesophagus in patients with Non-Small Cell Lung Cancer (NSCLC). EJC SUPPLEMENTS, 3 (2), 339-340.
Penney, G.P., Barratt, D.C., Chan, C.S.K., Slomczykowski, M., Carter, T.J., Edwards, P.J., Hawkes, D.J. (2005). Cadaver validation of intensity-based ultrasound-to-CT registration.
Rhode, K.S., Lambrou, T., Hawkes, D.J., Seifalian, A.M. (2005). Novel approaches to the measurement of arterial blood flow from dynamic digital X-ray images. IEEE TRANS MED IMAGING, 24 (278-0062 (Print), 4), 500-513.

2004

Blackall, J.M., Penney, G.P., King, A.P., Adam, A.N., Hawkes, D.J. (2004). Tracking alignment of sparse ultrasound with preoperative images of the liver and an interventional plan using models of respiratory motion and deformation.
Byrne, J.V., Colominas, C., Hipwell, J., Cox, T., Noble, J.A., Penney, G.P., Hawkes, D.J. (2004). Assessment of a technique for 2D-3D registration of cerebral intra-arterial angiography. BRITISH JOURNAL OF RADIOLOGY, 77 (914), 123-128. doi:10.1259/bjr/27339681
Byrne, J.V., Colominas, C., Hipwell, J., Cox, T., Noble, J.A., Penney, G.P., Hawkes, D.J. (2004). Assessment of a technique for 2D-3D registration of cerebral intra-arterial angiography. BR J RADIOL, 77 (007-1285 (Print), 914), 123-128.
Chan, C.S.K., Barratt, D.C., Edwards, P.J., Slomczykowski, M., Carter, T.J., Hawkes, D.J. (2004). Cadaver validation of the use of ultrasound for the instantiation of bony anatomy in image-guided orthopaedic surgery.
Chan, C.S.K., Edwards, P.J., Barratt, D.C., Slomczykowski, M., Hawkes, D.J. (2004). Ultrasound-based reconstruction and registration of 3D bone anatomy using statistical shape.
Chandler, A.G., Schnabel, J.A., Hawkes, D.J., Netsch, T., Cocosco, C.A. (2004). Slice-to-volume registration using mutual information between probabilistic image classifications.
de Cunha, D.A., EADIE, L., Adams, B., Hawkes, D.J. (2004). Medical ultrasound image similarity measurement by human visual system (HVS) modelling.
de Cunha, D.A., Eadie, L.H., Barbur, J.L., Hawkes, D.J., Seifalian, A.M. (2004). The effect of image colour distortion on evaluation of donor liver suitability for transplantation. COMPUT BIOL MED, 34 (010-4825 (Print), 7), 615-632.
Edwards, P.J., Johnson, L.G., Hawkes, D.J., Fenlon, M.R., Strong, A.J., Gleeson, M.J. (2004). Clinical experience and perception in stereo augmented reality surgical navigation.
Johnson, L.G., Edwards, P.J., Griffin, L.D., Hawkes, D.J. (2004). Depth perception of stereo overlays in image-guided surgery. Medical Imaging 2004: Image Perception, Observer Performance, and Technology Assessment, 263-272.
Manzke, R., Grass, M., Hawkes, D. (2004). Artifact analysis and reconstruction improvement in helical cardiac cone beam CT.. IEEE Transactions on Medical Imaging, 23 (9), 1150-1164. doi:10.1109/TMI.2004.830804
Manzke, R., Grass, M., Nielsen, T., Köhler, T., Hawkes, D. (2004). Automatic phase point determination for cardiac CT imaging.
Manzke, R., Kohler, T., Nielsen, T., Hawkes, D., Grass, M. (2004). Automatic phase determination for retrospectively gated cardiac CT.. Medical Physics, 31 (12), 3345-3362.
Penney, G.P., Blackall, J.M., Hamady, M.S., Sabharwal, T., Adam, A., Hawkes, D.J. (2004). Registration of freehand 3D ultrasound and magnetic resonance liver images. Medical Image Analysis, 8 (1), 81-91. doi:10.1016/j.media.2003.07.003
Penney, G.P., Schnabel, J.A., Rueckert, D., Hawkes, D.J., Niessen, W.J. (2004). Registration-based interpolation using a high-resolution image for guidance.
Schnabel, J.A., Batchelor, P.G., Tanner, C., Quist, M., Gerritsen, F.A., Hawkes, D.J. (2004). Modelling tissue deformations using free-form modes of vibration.
Tanner, C., Khazen, M., Kessar, P., Leach, M.O., Hawkes, D.J. (2004). Classification Improvement by Segmentation Refinement: Application to Contrast-Enhanced MR-Mammography.
Zheng, Y., Tanner, C., Hill, D.L.G., Hawkes, D.J., White, M.J., Khazen, M., Leach, M.O. (2004). Alignment of dynamic contrast enhanced MR volumes of the breast for a multi-centre trial: An exemplar grid application.

2003

Chan, C.S.K., Edwards, P.J., Hawkes, D.J. (2003). Integration of ultrasound based registration with statistical shape models for computer assisted orthopaedic surgery.
Crum, W.R., Griffin, L.D., Hill, D.L., Hawkes, D.J. (2003). Zen and the art of medical image registration: correspondence, homology, and quality. NEUROIMAGE, 20 (053-8119 (Print), 3), 1425-1437. doi:10.1016/j.neuroimage.2003.07.014
Crum, W.R., Hill, D.L., Hawkes, D.J. (2003). Information theoretic similarity measures in non-rigid registration. INF PROCESS MED IMAGING, 18 (011-2499 (Print)), 378-387.
Hartkens, T., Hill, D.L., Castellano-Smith, A.D., Hawkes, D.J., Maurer, C.R., Jr, M., ...C, L. (2003). Measurement and analysis of brain deformation during neurosurgery. IEEE Transactions on Medical Imaging, 22 (1), 82-92. doi:10.1109/TMI.2002.806596
Hawkes, D.J., Edwards, P.J., Barratt, D.C., Blackall, J.M., Penney, G.P., Tanner, C. (2003). Measuring and Modeling Soft Tissue Deformation for Image Guided Interventions.
Hawkes, D.J., Hill, D.L. (2003). Medical imaging at Guy's Hospital, King's College London. IEEE TRANS MED IMAGING, 22 (278-0062 (Print), 9), 1033-1041.
Hawkes, D.J., Hill, D.L.G. (2003). Medical Imaging at Guy's Hospital, King's College London. IEEE Transactions on Medical Imaging, 22 (9), 1033-1041. doi:10.1109/TMI.2003.815866
Hipwell, J.H., Penney, G.P., McLaughlin, R.A., Rhode, K., Summers, P., Cox, T.C., ...Hawkes, D.J. (2003). Intensity-based 2-D-3-D registration of cerebral angiograms. IEEE TRANS MED IMAGING, 22 (278-0062 (Print), 11), 1417-1426.
Johnson, L.G., Edwards, P., Hawkes, D. (2003). Surface transparency makes stereo overlays unpredictable: the implications for augmented reality.. Studies in Health Technology and Informatics, 94 131-136. doi:10.3233/978-1-60750-938-7-131
Johnson, L.G., Edwards, P.J., Barratt, D.C., Hawkes, D.J. (2003). The problem of perceiving accurate depth information through a surgical augmented reality system.
Manzke, R., Grass, M., Nielsen, T., Shechter, G., Hawkes, D. (2003). Adaptive temporal resolution optimization in helical cardiac cone beam CT reconstruction. MEDICAL PHYSICS, 30 (12), 3072-3080. doi:10.1118/1.1624756
Noble, N.M., Hill, D.L., Breeuwer, M., Schnabel, J.A., Hawkes, D.J., Gerritsen, F.A., Razavi, R. (2003). Myocardial delineation via registration in a polar coordinate system. ACAD RADIOL, 10 (076-6332 (Print), 12), 1349-1358.
Razavi, R., Hill, D.L., Keevil, S.F., Miquel, M.E., Muthurangu, V., Hegde, S., ...Hawkes, D.J. (2003). Cardiac catheterisation guided by MRI in children and adults with congenital heart disease. The Lancet, 362 (9399), 1877-1882. doi:10.1016/S0140-6736(03)14956-2
Tanner, C., Schnabel, J.A., Castellano-Smith, A.D., Degenhard, A., Leach, M.O., Hose, D.R., ...Hawkes, D.J. (2003). Validation of nonrigid image registration using finite-element methods: application to breast MR images. IEEE Transactions on Medical Imaging, 22 (2), 238-247. doi:10.1109/TMI.2002.808367

2002

Batchelor, P.G., Castellano Smith, A.D., Hill, D.L.G., Hawkes, D.J., Cox, T.C.S., Dean, A.F. (2002). Measures of folding applied to the development of the human fetal brain.. IEEE Transactions on Medical Imaging, 21 (8), 953-965. doi:10.1109/TMI.2002.803108
Castellano-Smith, A.D., Hartkens, T., Schnabel, J.A., Hose, R., Liu, H., Hall, W., ...Hill, D.L.G. (2002). A registration based mesh construction technique for finite element models of brains. Proceedings of SPIE - The International Society for Optical Engineering, 4684 I 538-549. doi:10.1117/12.467196
Degenhard, A., Tanner, C., Hayes, C., Hawkes, D.J., Leach, M.O. (2002). Comparison between radiological and artificial neural network diagnosis in clinical screening. PHYSIOL MEAS, 23 (967-3334 (Print), 4), 727-739.
Hallpike, L., Hawkes, D.J. (2002). Medical image registration: An overview. Imaging, 14 (6), 455-463. doi:10.1259/img.14.6.140455
Hartkens, T., Hill, D.L.G., Castellano-Smith, A.D., Hawkes, D.J., Maurer, C.R., Martin, A.J., ...Truwit, C.L. (2002). Using points and surfaces to improve voxel-based non-rigid registration.
Hawkes, D.J., Spendley, D.G., Alfaham, M. (2002). Hypothesis waiting for proof: unwrapping neonates for transfer. ARCH DIS CHILD FETAL NEONATAL ED, 87 (359-2998 (Print), 3), F232-.
Hipwell, J.H., Penney, G.P., Cox, T.C., Byrne, J.V., Hawkes, D.J. (2002). 2D-3D intensity based registration of DSA and MRA – A comparison of similarity measures.
Jannin, P., Fitzpatrick, J.M., Hawkes, D.J., Pennec, X., Shahidi, R., Vannier, M.W. (2002). Validation of medical image processing in image-guided therapy. IEEE Transactions on Medical Imaging, 21 (12), 1445-1449. doi:10.1109/TMI.2002.806568
Jannin, P., Fitzpatrick, J.M., Hawkes, D.J., Pennec, X., Shahidi, R., Vannier, M.W. (2002). Validation of medical image processing in image-guided therapy. IEEE TRANS MED IMAGING, 21 (278-0062 (Print), 12), 1445-1449.
McLaughlin, R.A., Hipwell, J., Hawkes, D.J., Alison Noble, J., Byrne, J.V., Cox, T. (2002). A comparison of 2D-3D intensity-based registration and feature-based registration for neurointerventions.
Noble, N.M.I., Hill, D.L.G., Breeuwer, M., Schnabel, J.A., Hawkes, D.J., Gerritsen, F.A., Razavi, R. (2002). Myocardial delineation via registration in a polar coordinate system.
Penney, G.P., Little, J.A., Weese, J., Hill, D.L.G., Hawkes, D.J. (2002). Deforming a preoperative volume to represent the intraoperative scene.. Computer Aided Surgery, 7 (2), 63-73. doi:10.1002/igs.10034
Penney, G.P., Little, J.A., Weese, J., Hill, D.L., Hawkes, D.J. (2002). Deforming a preoperative volume to represent the intraoperative scene. COMPUT AIDED SURG, 7 (092-9088 (Print), 2), 63-73.
Rhode, K., Lambrou, T., Seifalian, A.M., Hawkes, D.J. (2002). In-vitro validation of a novel model-based approach to the measurement of arterial blood flow waveforms from dynamic digital x-ray images.
Schnabel, J.A., Tanner, C., Castellano-Smith, A.D., Degenhard, A., Hayes, C., Leach, M.O., ...Hawkes, D.J. (2002). Finite element based validation of non-rigid registration using single- and multi-level free-form deformations: Application to contrast-enhanced MR mammography. Proceedings of SPIE - The International Society for Optical Engineering, 4684 I 550-561. doi:10.1117/12.467197
Tanner, C., Schnabel, J.A., Castellano-Smith, A.D., Sonoda, L.I., Hill, D.L., Hawkes, D.J., ...Hose, D.R. (2002). Comparison of biomechanical breast models: a case study.
Tanner, C., Schnabel, J.A., Degenhard, A., Castellano-Smith, A.D., Hayes, C., Leach, M.O., ...Hawkes, D.J. (2002). Validation of volume-preserving non-rigid registration: Application to contrast-Enhanced MR-mammography.

2001

Blackall, J.M., King, A.P., Penney, G.P., Adam, A., Hawkes, D.J. (2001). A Statistical Model of Respiratory Motion and Deformation of the Liver.
Castellano-Smith, A.D., Hartkens, T., Schnabel, J., Hose, D.R., Liu, H., Hall, W.A., ...Hill, D. (2001). Constructing patient specific models for correcting intraoperative brain deformation.
Clarkson, M.J., Rueckert, D., Hill, D.L.G., Hawkes, D.J. (2001). Using photo-consistency to register 2D optical images of the human face to a 3D surface model.. IEEE Transactions on Pattern Analysis and Machine Intelligence, 23 (11), 1266-1280.
Degenhard, A., Tanner, C., Hayes, C., Hawkes, D.J., Leach, M.O. (2001). Half fourier acquisition applied to time series analysis of contrast agent uptake.
Degenhard, A., Tanner, C., Hayes, C., Hawkes, D.J., Leach, M.O. (2001). Pre-processed image reconstruction applied to breast and brain MR imaging. PHYSIOL MEAS, 22 (967-3334 (Print), 3), 589-604.
Edwards, P.J., Hawkes, D.J., Penney, G.P., Clarkson, M.J. (2001). Guiding Therapeutic Proceedures. In Hajnal, J.V., Hill, D.L.G., Hawkes, D.J. (Eds.), Medical Image Registration. (pp. 253-278). CRC.
Hill, D.L., Batchelor, P.G., Holden, M., Hawkes, D.J. (2001). Medical image registration. PHYS MED BIOL, 46 (031-9155 (Print), 3), R1-45.
Hill, D.L., Batchelor, P.G., Holden, M., Hawkes, D.J. (2001). Medical image registration.. Physics in Medicine and Biology, 46 (3), doi:10.1088/0031-9155/46/3/201
Hill, D.L.G., Batchelor, P.G. (2001). Registration Methodology-Algorithms,. In Hajnal, J., Hill, D.L.G., Hawkes, D. (Eds.), Medical Image Registration,. CRC.
Holden, M., Breeuwer, M., McLeish, K., Hawkes, D.J., Keevil, S.F., Hill, D.L.G. (2001). Sources and correction of higher order geometrical distortion for serial MR brain imaging. Proceedings of SPIE - The International Society for Optical Engineering, 4322 (1), 69-78. doi:10.1117/12.431151
Johnson, L., EADIE, L., de Cunha, D.A., Edwards, P., Hawkes, D.J. (2001). The limits of transparent depth perception with restricted field of view: Application in an augmented reality surgical microscope.
King, A.P., Batchelor, P.G., Penney, G.P., Blackall, J.M., Hill, D.L.G., Hawkes, D.J. (2001). Estimating Sparse Deformation Fields Using Multiscale Bayesian Priors and 3-D Ultrasound.
King, A.P., Blackall, J.M., Penney, G.P., Hawkes, D.J. (2001). Tracking liver motion using 3-D ultrasound and a surface based statistical shape model.
Penney, G.P., Batchelor, P.G., Hill, D.L., Hawkes, D.J., Weese, J. (2001). Validation of a two- to three-dimensional registration algorithm for aligning preoperative CT images and intraoperative fluoroscopy images. MED PHYS, 28 (094-2405 (Print), 6), 1024-1032.
Penney, G.P., Batchelor, P.G., Hill, D.L., Hawkes, D.J., Weese, J. (2001). Validation of a two- to three-dimensional registration algorithm for aligning preoperative CT images and intraoperative fluoroscopy images.. Medical Physics, 28 (6), 1024-1032. doi:10.1118/1.1373400
Penney, G.P., Edwards, P.J., King, A.P., Blackall, J.M., Batchelor, P.G., Hawkes, D.J. (2001). Stochastic Iterative Closest Point Algorithm (stochastICP).
Rhode, K., Ennew, G., Lambrou, T., Seifalian, A., Hawkes, D. (2001). In-vitro validation of a novel model-based approach to the measurement of arterial blood flow waveforms from dynamic digital x-ray images.
Rösch, P., Mohs, T., Netch, T., Quist, M., Penney, G.P., Hawkes, D.J., Weese, J. (2001). Template selection and rejection for robust non-rigid 3D registration in the presence of large deformations. Proceedings of SPIE - The International Society for Optical Engineering, 4322 (1), 545-556. doi:10.1117/12.431128
Schnabel, J.A., Rueckert, D., Quist, M., Blackall, J.M., Castellano-Smith, A.D., Hartkens, T., ...Truwit, C.L. (2001). A generic framework for non-rigid registration based on non-uniform multi-level free-form deformations.
Schnabel, J.A., Tanner, C., Smith, A.D.C., Leach, M.O., Hayes, C., Degenhard, A., ...Hawkes, D.J. (2001). Validation of non-rigid registration using finite element methods.
Tanner, C., Degenhard, A., Schnabel, J.A., Smith, A.C., Hayes, C., Sonoda, L.I., ...Hawkes, D.J. (2001). A method for the comparison of biomechanical breast models.

2000

Blackall, J.M., Rueckert, D., Maurer, C.R., Penney, G.P., Hill, D.L.G., Hawkes, D.J. (2000). An image registration approach to automated calibration for freehand 3D ultrasound.
Castellano Smith, A.D., Batchelor, P.G., Hill, D.L.G., Dean, A.D., Cox, T., Hawkes, D.J. (2000). The Shape of the Developing Foetal Cortex from MR Images.
Castellano Smith, A.D., Batchelor, P.G., Hill, D.L.G., Dean, A.D., Cox, T., Hawkes, D.J. (2000). he Shape of the Developing Foetal Cortex from MR Images.
Clarkson, M.J., Rueckert, D., Hill, D.L., Hawkes, D.J. (2000). Multiple 2D video/3D medical image registration algorithm.
Edwards, P.J., King, A.P., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Strong, A.J. (2000). Design and evaluation of a system for microscope-assisted guided interventions (MAGI). IEEE TRANSACTIONS ON MEDICAL IMAGING, 19 (11), 1082-1093. doi:10.1109/42.896784
Hawkes, D.J., Rueckert, D., Clarkson, M.J. (2000). Method of 3D/2D Registration of optical views to a surface model. WO0159708 (A1).
Hill, D.L., Smith, A.D., Simmons, A., Maurer, C.R., Jr, C., T C, E., ...C, E. (2000). Sources of error in comparing functional magnetic resonance imaging and invasive electrophysiological recordings. J NEUROSURG, 93 (022-3085 (Print), 2), 214-223.
Holden, M., Hill, D.L., Denton, E.R., Jarosz, J.M., Cox, T.C., Rohlfing, T., ...Hawkes, D.J. (2000). Voxel similarity measures for 3-D serial MR brain image registration. IEEE TRANS MED IMAGING, 19 (278-0062 (Print), 2), 94-102.
King, A.P., Blackall, J.M., Penney, G.P., Edwards, P.J., Hill, D.L.G., Hawkes, D.J. (2000). Bayesian estimation of intra-operative deformation for image-guided surgery using 3-D ultrasound.
King, A.P., Edwards, P.J., Maurer, C.R., Cunha, D.A.D., Gaston, R.P., Clarkson, M., ...Strong, A.J. (2000). Stereo Augmented Reality in the Surgical Microscope. Presence: Teleoperators and Virtual Environments, 9 360-368. doi:10.1162/105474600566862
Rhode, K., Lambrou, T., Hawkes, D.J., Hamilton, G., Seifalian, A.M. (2000). Validation of an optical flow algorithm to measure blood flow waveforms in arteries using dynamic digital x-ray images. Proceedings of SPIE, 1 (24 (Sp), 1414-1425.
Rueckert, D., Clarkson, M.J., Hill, D.L.G., Hawkes, D.J. (2000). Non-rigid registration using higher-order mutual information.
Tanner, C., Schnabel, A., Chung, D., Clarkson, M.J., Rueckert, D., Hill, D.L.G., Hawkes, D.J. (2000). Volume and shape preservation of enhancing lesions when applying non-rigid registration to a time series of contrast enhancing MR breast images.

1999

Batchelor, P., Smith, A.C., Hill, D.G., Dean, A.D., Cox, T., Hawkes, D.J. (1999). The folding of the human foetal brain. NeuroImage, 9 (6 PART II),
Clarkson, M.J., Rueckert, D., Hill, D.L., Hawkes, D.J. (1999). Registration of multiple video images to preoperative CT for image-guided surgery.
Clarkson, M.J., Rueckert, D., King, A.P., Edwards, P.J., Hill, D.L.G., Hawkes, D.J. (1999). Registration of Video Images to Tomographic Images by Optimising Mutual Information Using Texture Mapping.
Denton, E.R.E., Sonoda, L.I., Rueckert, D., Rankin, S.C., Hayes, C., Leach, M.O., ...Hawkes, D.J. (1999). Comparison and evaluation of rigid, affine, and nonrigid registration of breast MR images. Journal of Computer Assisted Tomography, 23 (5), 800-805. doi:10.1097/00004728-199909000-00031
Denton, E.R., Sonoda, L.I., Rueckert, D., Rankin, S.C., Hayes, C., Leach, M.O., ...Hawkes, D.J. (1999). Comparison and evaluation of rigid, affine, and nonrigid registration of breast MR images. J COMPUT ASSIST TOMOGR, 23 (363-8715 (Print), 5), 800-805.
Edwards, P.J., King, A.P., Hawkes, D.J., Fleig, O., Maurer, C.R., Jr, H., ...R P, C. (1999). Stereo augmented reality in the surgical microscope. STUD HEALTH TECHNOL INFORM, 62 (926-9630 (Print)), 102-108.
Edwards, P.J., King, A.P., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Strong, A.J. (1999). Design and evaluation of a system for microscope-assisted guided interventions (MAGI).
Gleeson, M.J., Strong, A.J., Edwards, P.E., Fenlon, M., King, A., Chandra, S., Hawkes, D.J. (1999). Image injection neuronavigation using continuous tracking of the patient and microscope during skull base surgery. Skull Base Surgery, 9 (SUPPL. 2), 16-.
Hill, D.L.G., Maurer, C.R., Martin, A.J., Sabanathan, S., Hall, W.A., Hawkes, D.J., ...Truwit, C.L. (1999). Assessment of intraoperative brain deformation using interventional mr imaging.
Holden, M., Denton, E.R.E., Jarosz, J.M., Cox, T.C.S., Studholme, C., Hawkes, D.J., Hill, D.L.G. (1999). Detecting small anatomical change with 3D serial MR subtraction images. Proceedings of SPIE - The International Society for Optical Engineering, 3661 (I), 44-55.
Holden, M., Hill, D.L.G., Denton, E.R.E., Jarosz, J.M., Cox, T.C.S., Hawkes, D.J. (1999). Voxel similarity measures for 3D serial MR brain image registration.
King, A.P., Edwards, P.J., Maurer, C.R., de Cunha, D.A., Hawkes, D.J., Hill, D.L.G., ...Fenlon, M.R. (1999). A system for microscope-assisted guided interventions.
Maurer, C.R., Gaston, R.P., Hill, D.L.G., Gleeson, M.J., Taylor, M.G., Fenlon, M.R., ...Hawkes, D.J. (1999). AcouStick: A tracked a-mode ultrasonography system for registration in image-guided surgery.
Rueckert, D., Sonoda, L.I., Denton, E., Rankin, S., Hayes, C., Leach, M.O., ...Hawkes, D.J. (1999). Comparison and evaluation of rigid and non-rigid registration of breast MR images. Proceedings of SPIE - The International Society for Optical Engineering, 3661 (I), 78-88.
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J. (1999). Nonrigid registration using free-form deformations: application to breast MR images. IEEE TRANS MED IMAGING, 18 (278-0062 (Print), 8), 712-721.
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J. (1999). Nonrigid registration using free-form deformations: application to breast MR images.. IEEE transactions on medical imaging, 18 (8), 712-721. doi:10.1109/42.796284
Ruff, C.F., Hughes, S.W., Hawkes, D.J. (1999). Volume Estimation from Sparse Planar Images using Deformable Models. Image and Vision Computing, 17 (8), 559-565.
Studholme, C., Hill, D.L.G., Hawkes, D.J. (1999). An overlap invariant entropy measure of 3D medical image alignment .. Pattern Recognition, 32 71-86.

1998

Dorward, N.L., Alberti, O., Zhao, J., Dijkstra, A., Buurman, J., Palmer, J.D., ...Thomas, D.G.T. (1998). Interactive image-guided neuroendoscopy: Development and early clinical experience. MINIMALLY INVASIVE NEUROSURGERY, 41 (1), 31-34. doi:10.1055/s-2008-1052011
Edwards, P.J., Hill, D.L., Little, J.A., Hawkes, D.J. (1998). A three-component deformation model for image-guided surgery. MED IMAGE ANAL, 2 (361-8415 (Print), 4), 355-367.
Fleig, O.J., Edwards, P.J., Chandra, S., Stuttler, H., Hawkes, D.J. (1998). Automated microscope calibration for image guided surgery.
Hawkes, D.J. (1998). Algorithms for radiological image registration and their clinical application.
Hawkes, D.J. (1998). Algorithms for radiological image registration and their clinical application. J ANAT, 193 ( Pt 3) (021-8782 (Print)), 347-361.
Hill, D.L.G., Simmons, A., Castellano Smith, A.D., Maurer, C.R., Cox, T.C.S., Elwes, R., ...Polkey, C.E. (1998). Pitfalls in comparing functional magnetic resonance imaging and invasive electrophysiology recordings.
Hill, D.L., Maurer, C.R., Jr, S., C, F., J M, H., D, J. (1998). Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm. J COMPUT ASSIST TOMOGR, 22 (363-8715 (Print), 2), 317-323.
Hill, D.L., Maurer, C.R., Studholme, C., Fitzpatrick, J.M., Hawkes, D.J. (1998). Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm.. Journal of Computer Assisted Tomography, 22 (2), 317-323. doi:10.1097/00004728-199803000-00031
Maurer, C.R., Hill, D.L.G., Martin, A.J., Liu, H., McCue, M., Rueckert, D., ...Hawkes, D.J. (1998). Investigation of intraoperative brain deformation using a 1.5-T interventional MR system: Preliminary results. IEEE Transactions on Medical Imaging, 17 (5), 817-825. doi:10.1109/42.736050
Maurer, C.R., Jr, H., D L, M., A J, L., H, M., M, R., ...R E, H. (1998). Investigation of intraoperative brain deformation using a 1.5-T interventional MR system: preliminary results. IEEE TRANS MED IMAGING, 17 (278-0062 (Print), 5), 817-825.
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L.G., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2-D-3-D medical image registration. IEEE TRANSACTIONS ON MEDICAL IMAGING, 17 (4), 586-595. doi:10.1109/42.730403
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L.G., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2D-3D medical image registration.
Penney, G.P., Weese, J., Little, J.A., Desmedt, P., Hill, D.L., Hawkes, D.J. (1998). A comparison of similarity measures for use in 2-D-3-D medical image registration. IEEE TRANS MED IMAGING, 17 (278-0062 (Print), 4), 586-595.
Rueckert, D., Hayes, C., Studholme, C., Summers, P., Leach, M., Hawkes, D.J. (1998). Non-rigid registration of breast MR images using mutual information.
Smith, A.D.C., Hill, D.L.G., Hawkes, D.J., Polkey, C.E., Cox, T.C.S. (1998). Surface simplification for shape measurement - application to the human brain..
Studholme, C., Hawkes, D.J., Hill, D.L. (1998). A normalized entropy measure for multimodality image alignment.

1997

Edwards, P.J., Hawkes, D.J., Hill, D., Jewell, D., Spink, R., Clmndra, S., ...Gleeson, M.J. (1997). Three dimensional image injection in the binocular operating microscope. Skull Base Surgery, 7 (SUPPL. 2), 55-.
Edwards, P.J., Hill, D.L.G., Little, J.A., Hawkes, D.J. (1997). Deformation for image guided interventions using a three component tissue model.
Hill, D.L.G., Langsaeter, L.A., Poynter-Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., ...Gleeson, M.J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy. Computer Aided Surgery, 2 (5), 264-275. doi:10.1002/(SICI)1097-0150(1997)2:5<264::AID-IGS2>3.0.CO;2-Y
Hill, D.L., Langsaeter, L.A., Poynter-Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., ...Gleeson, M.J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy. COMPUT AIDED SURG, 2 (092-9088 (Print), 5), 264-275.
Hill, D.L., Langsaeter, L.A., Poynter-Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., ...Gleeson, M.J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy.. Computer aided surgery : official journal of the International Society for Computer Aided Surgery, 2 (5), 264-275. doi:10.1002/(sici)1097-0150(1997)2:5<264::aid-igs2>3.0.co;2-y
Little, J.A., Hawkes, D.J. (1997). The registration of multiple medical images acquired from a single subject: Why, how, what next?. Statistical Methods in Medical Research, 6 (3), 239-265.
Little, J.A., Hawkes, D.J. (1997). The registration of multiple medical images acquired from a single subject: why, how, what next?. STAT METHODS MED RES, 6 (962-2802 (Print), 3), 239-265.
Little, J.A., Hill, D.L.G., Hawkes, D.J. (1997). Deformations incorporating rigid structures .. Computer Vision Image Understanding, 66 (2), 223-232.
Strasters, K.C., Little, J.A., Buurman, J., Hill, D.L.G., Hawkes, D.J. (1997). Anatomical landmark image registration: Validation and comparison.
Studholme, C., Hill, D.L., Hawkes, D.J. (1997). Automated three-dimensional registration of magnetic resonance and positron emission tomography brain images by multiresolution optimization of voxel similarity measures. MED PHYS, 24 (094-2405 (Print), 1), 25-35.
Summers, P.E., Bhalerao, A.H., Hawkes, D.J. (1997). Multiresolution, model-based segmentation of MR angiograms. J MAGN RESON IMAGING, 7 (053-1807 (Print), 6), 950-957.
Thomas, D.G.T., Dorward, N.L., Kingsley, D., Kitchen, N.D., Palmer, J.D., Alberti, O., ...Dijkstra, A. (1997). Clinical experience with the EasyGuide Neuro navigation system.
Weese, J., Penney, G.P., Desmedt, P., Buzug, T.M., Hill, D.L.G., Hawkes, D.J. (1997). Voxel-Based 2-D/3-D registration of fluoroscopy images and CT scans for image-guided surgery. IEEE Transactions on Information Technology in Biomedicine, 1 (4), 284-293. doi:10.1109/4233.681173
Weese, J., Penney, G.P., Desmedt, P., Buzug, T.M., Hill, D.L., Hawkes, D.J. (1997). Voxel-based 2-D/3-D registration of fluoroscopy images and CT scans for image-guided surgery. IEEE TRANS INF TECHNOL BIOMED, 1 (089-7771 (Print), 4), 284-293.
West, J., Fitzpatrick, J.M., Wang, M.Y., Dawant, B.M., Maurer, C.R., Jr, K., ...D, C. (1997). Comparison and evaluation of retrospective intermodality brain image registration techniques. J COMPUT ASSIST TOMOGR, 21 (363-8715 (Print), 4), 554-566.
West, J., Fitzpatrick, J.M., Wang, M.Y., Dawant, B.M., Maurer, C.R., Kessler, R.M., ...Collignon, A. (1997). Comparison and evaluation of retrospective intermodality brain image registration techniques.
Wong, J.C.H., Studholme, C., Hawkes, D.J., Maisey, M.N. (1997). Evaluation of the limits of visual detection of image misregistration in a brain fluorine-18 fluorodeoxyglucose PET-MRI study. European Journal of Nuclear Medicine, 24 (6), 642-650. doi:10.1007/s002590050099
Wong, J.C., Studholme, C., Hawkes, D.J., Maisey, M.N. (1997). Evaluation of the limits of visual detection of image misregistration in a brain fluorine-18 fluorodeoxyglucose PET-MRI study. EUR J NUCL MED, 24 (340-6997 (Print), 6), 642-650.

1996

Bladin, C.F., Colchester, A.C., Hawkes, D.J., Seifalian, A.M., Iqbal, N., Hardingham, C.R. (1996). Morphological and hemodynamic assessments of carotid stenosis using quantitative digital subtraction angiography. STROKE, 27 (039-2499 (Print), 9), 1672-1678.
Gleeson, M.J., Hill, D.L., Hawkes, D.J., Cox, T.C., Ruff, C., Studholme, C., ...Strong, A. (1996). 3-D imaging for skull base surgery.
Hill, D.L.G., Poynter Smith, P.N., Emery, C.L., Summers, P.E., Keevil, S.F., Pracy, J.P.M., ...Gleeson, M.J. (1996). MRI guided intranasal flexible micro-endoscopy.
Hill, D.L.G., Smith, P.N.P., Emery, C.L., Summers, P.E., Keevil, S.F., Pracy, J.P.M., ...Gleeson, M.J. (1996). MRI guided intranasal flexible micro-endoscopy.
Little, J.A., Hill, D.L.G., Hawkes, D.J. (1996). Deformations incorporating rigid structures.
Studholme, C., Hill, D.L.G., Hawkes, D.J., I.E.E.E. (1996). Incorporating connected region labelling into automated image registration using mutual information.
Studholme, C., Hill, D.L., Hawkes, D.J. (1996). Automated 3-D registration of MR and CT images of the head. MED IMAGE ANAL, 1 (361-8415 (Print), 2), 163-175.
Studholme, C., Little, J.A., Penny, G.P., Hill, D.L.G., Hawkes, D.J. (1996). Automated multimodality registration using the full affine transformation: Application to MR and CT guided skull base surgery.
Thomas, D.G., Doshi, P., Colchester, A., Hawkes, D.J., Hill, D.L., Zhao, J., ...Evans, R.I. (1996). Craniotomy guidance using a stereo-video-based tracking system. STEREOTACT FUNCT NEUROSURG, 66 (011-6125 (Print), 1-3), 81-83.
Thomas, D.G.T., Doshi, P., Colchester, A., Hawkes, D.J., Hill, D.L.C., Zhao, J., ...Evans, R.I. (1996). Craniotomy guidance using a stereo-video-based tracking system.
Wong, W.L., Hussain, K., Chevretton, E., Hawkes, D.J., Baddeley, H., Maisey, M., McGurk, M. (1996). Validation and clinical application of computer-combined computed tomography and positron emission tomography with 2-[18F]fluoro-2-deoxy-D-glucose head and neck images. AM J SURG, 172 (002-9610 (Print), 6), 628-632.

1995

Edwardsl, P.J., Hill, D., Hawkes, D.J., Spink, R., Colchester, A., Strong, A. (1995). Neurosurgical guidance using the stereo microscope.
Edwards, P.J., Hawkes, D.J., Hill, D.L.G., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance. Computer Aided Surgery, 1 (3), 172-178. doi:10.3109/10929089509105692
Edwards, P.J., Hawkes, D.J., Hill, D.L.G., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance. Journal of Image Guided Surgery, 1 (3), 172-178. doi:10.1002/(SICI)1522-712X(1995)1:3<172::AID-IGS7>3.0.CO;2-7
Edwards, P.J., Hawkes, D.J., Hill, D.L., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance. J IMAGE GUID SURG, 1 (078-7844 (Print), 3), 172-178.
Edwards, P.J., Hawkes, D.J., Hill, D.L., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance.. Journal of image guided surgery, 1 (3), 172-178. doi:10.1002/(sici)1522-712x(1995)1:3<172::aid-igs7>3.0.co;2-7
Edwards, P.J., Hill, D.L.G., Little, J.A., Sahni, V.A.S., Hawkes, D.J. (1995). Medical image registration incorporating deformations.
Hawkes, D.J. (1995). Imaging requirements for image guided interventions.
Hawkes, D.J., Ruff, C.F., Hill, D.L.G., Studholme, C., Edwards, P.J., Wong, W.L., Padhani, A. (1995). Three-dimensional multimodal imaging in image-guided interventions. Seminars in Interventional Radiology, 12 (1), 63-74. doi:10.1055/s-2008-1061314
Henri, C.J., Colchester, A.C.F., Zhao, J., Hawkes, D.J., Hill, D.L.G., Evans, R.L. (1995). Registration of 3-D surface data for intra-operative guidance and visualization in frameless stereotactic neurosurgery.
Zhao, J., Colchester, A.C.F., Henri, C.J., Hawkes, D., Ruff, C. (1995). Visualisation of multimodal images for neurosurgical planning and guidance.

1994

COLCHESTER, A.C.F., ZHAO, J., HENRI, C., EVANS, R.L., ROBERTS, P., MAITLAND, N., ...THOMAS, D.G. (1994). CRANIOTOMY SIMULATION AND GUIDANCE USING A STEREO VIDEO-BASED TRACKING SYSTEM.
Gandhe, A.J., Hill, D.L.G., Studholme, C., Hawkes, D.J., Ruff, C.F., Cox, T.C.S., ...Strong, A.J. (1994). Combined and three-dimensional rendered multimodal data for planning cranial base surgery: A prospective evaluation. Neurosurgery, 35 (3), 463-471. doi:10.1227/00006123-199409000-00015
Gandhe, A.J., Hill, D.L., Studholme, C., Hawkes, D.J., Ruff, C.F., Cox, T.C., ...Strong, A.J. (1994). Combined and three-dimensional rendered multimodal data for planning cranial base surgery: a prospective evaluation. NEUROSURGERY, 35 (148-396X (Print), 3), 463-470.
Hawkes, D.J., Seifalian, A.M., Colchester, A.C.F., Iqbal, N., Hardingham, C.R., Bladin, C.F., Hobbs, K.E.F. (1994). Validation of volume blood flow measurements using three-dimensional distance-concentration functions derived from digital x-ray angiograms. Investigative Radiology, 29 (4), 434-442.
Hawkes, D.J., Seifalian, A.M., Colchester, A.C., Iqbal, N., Hardingham, C.R., Bladin, C.F., Hobbs, K.E. (1994). Validation of volume blood flow measurements using three-dimensional distance-concentration functions derived from digital x-ray angiograms. INVEST RADIOL, 29 (020-9996 (Print), 4), 434-442.
Hill, D.L.G., Hawkes, D.J. (1994). Medical image registration using knowledge of adjacency of anatomical structures.. Image and Vision Computing, 12 173-178.
HILL, D.L.G., STUDHOLME, C., HAWKES, D.J. (1994). VOXEL SIMILARITY MEASURES FOR AUTOMATED IMAGE REGISTRATION.
Hill, D.L., Hawkes, D.J., Gleeson, M.J., Cox, T.C., Strong, A.J., Wong, W.L., ...Sofat, A. (1994). Accurate frameless registration of MR and CT images of the head: applications in planning surgery and radiation therapy.. Radiology, 191 (2), 447-454.
STUDHOLME, C., HILL, D.L.G., HAWKES, D.J. (1994). USING VOXEL SIMILARITY AS A MEASURE OF MEDICAL IMAGE REGISTRATION.

1993

Hill, D., Hawkes, D., Harrison, N., Ruff, C. (1993). A strategy for automated multimodality image registration incorporating anatomical knowledge and imager characteristics. Lecture Notes In Computer Science, 687 182-196.
Hill, D.L.G., Hawkes, D.J., Hussain, Z., Green, S.E.M., Ruff, C.F., Robinson, G.P. (1993). Accurate combination of CT and MR data of the head: Validation and applications in surgical and therapy planning.. Computerized Medical Imaging, 17 357-362.
Neelin, P., Crossman, J., Hawkes, D.J., Ma, Y., Evans, A.C. (1993). Validation of an MRI/PET landmark registration method using 3D simulated PET images and point simulations. COMPUT MED IMAGING GRAPH, 17 (895-6111 (Print), 4-5), 351-356.
NEELIN, P., CROSSMAN, J., HAWKES, D.J., MA, Y., EVANS, A.C. (1993). VALIDATION OF AN MRI/PET LANDMARK REGISTRATION METHOD USING 3D SIMULATED PET IMAGES AND POINT SIMULATIONS. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 17 (4-5), 351-356. doi:10.1016/0895-6111(93)90028-L

1992

Brunt, J.N., Wicks, D.A., Hawkes, D.J., Seifalian, A.M., du Boulay, G.H., Colchester, A.F., Wallis, A. (1992). The measurement of blood flow waveforms from X-ray angiography. Part 1: Principles of the method and preliminary validation. PROC INST MECH ENG [H ], 206 (954-4119 (Print), 2), 73-85.
Colchester, A., Seifalian, A., Hawkes, D., Brunt, J., Wicks, D., du Boulay, G., Hobbs, K. (1992). Analysis of the variation of the distance-density curves with time as a way of extracting flow information from digital angiograms.. Investigative Radiology, 27 (3), 274-.
COLCHESTER, A., SEIFALIAN, A., HAWKES, D., BRUNT, J., WICKS, D., DUBOULAY, G., HOBBS, K. (1992). DETERMINATION OF INSTANTANEOUS AND AVERAGE BLOOD-FLOW RATES FROM DIGITAL ANGIOGRAMS OF VESSEL PHANTOMS USING DISTANCE-DENSITY CURVES. INVESTIGATIVE RADIOLOGY, 27 (3), 274. doi:10.1097/00004424-199203000-00023
HAWKES, D.J., HARDINGHAM, C.R., SEIFALIAN, A.M., VIRDEE, M., COLCHESTER, A.C.F. (1992). RECENT ADVANCES IN EXTRACTING QUANTITATIVE INFORMATION FROM X-RAY ANGIOGRAPHIC DATA.
Maisey, M.N., Hawkes, D.J., Lukawieck-Vydelingum, A.M. (1992). Synergistic imaging. EUR J NUCL MED, 19 (340-6997 (Print), 12), 1002-1005.
SEIFALIAN, A.M., HAWKES, D.J., BLADIN, C.F., HARDINGHAM, C.R., IQBAL, N., COLCHESTER, A.C.F., HOBBS, K.E.F. (1992). VOLUME BLOOD-FLOW WAVE-FORMS MEASUREMENTS FROM QUANTITATIVE X-RAY ANGIOGRAPHIC DATA WITH AID OF 3-DIMENSIONAL RECONSTRUCTIONS.

1991

Hawkes, D.J., Hardingham, C.R., Colchester, A.C. (1991). Matching of geometric models in the analysis of lumen shape in digital X-ray angiography. PROG CLIN BIOL RES, 363 (361-7742 (Print)), 341-353.
Hawkes, D.J., Robinson, L., Crossman, J.E., Sayman, H.B., Mistry, R., Maisey, M.N., Spencer, J.D. (1991). Registration and display of the combined bone scan and radiograph in the diagnosis and management of wrist injuries. EUR J NUCL MED, 18 (340-6997 (Print), 9), 752-756.
Hill, D.L., Hawkes, D.J., Crossman, J.E., Gleeson, M.J., Cox, T.C., Bracey, E.E., ...Graves, P. (1991). Registration of MR and CT images for skull base surgery using point-like anatomical features. BR J RADIOL, 64 (007-1285 (Print), 767), 1030-1035.
Hill, D.L., Hawkes, D.J., Crossman, J.E., Gleeson, M.J., Cox, T.C., Bracey, E.E., ...Graves, P. (1991). Registration of MR and CT images for skull base surgery using point-like anatomical features.. British Journal of Radiology, 64 (767), 1030-1035. doi:10.1259/0007-1285-64-767-1030
Lehmann, E.D., Hawkes, D.J., Hill, D.L., Bird, C.F., Robinson, G.P., Colchester, A.C., Maisey, M.N. (1991). Computer-aided interpretation of SPECT images of the brain using an MRI-derived 3D neuro-anatomical atlas. MED INFORM (LOND), 16 (307-7640 (Print), 2), 151-166.
Lynch, J.A., Hawkes, D.J., Buckland-Wright, J.C. (1991). A robust and accurate method for calculating the fractal signature of texture in macroradiographs of osteoarthritic knees. Informatics for Health and Social Care, 16 (2), 241-251. doi:10.3109/14639239109012130
Lynch, J.A., Hawkes, D.J., Buckland-Wright, J.C. (1991). A robust and accurate method for calculating the fractal signature of texture in macroradiographs of osteoarthritic knees. MED INFORM (LOND), 16 (307-7640 (Print), 2), 241-251.
Lynch, J.A., Hawkes, D.J., Buckland-Wright, J.C. (1991). Analysis of texture in macroradiographs of osteoarthritic knees using the fractal signature. PHYS MED BIOL, 36 (031-9155 (Print), 6), 709-722.
Seifalian, A.M., Hawkes, D.J., Hardingham, C.R., Colchester, A.C., Reidy, J.F. (1991). Validation of a quantitative radiographic technique to estimate pulsatile blood flow waveforms using digital subtraction angiographic data. J BIOMED ENG, 13 (141-5425 (Print), 3), 225-233.
Seifalian, A.M., Stansby, G.P., Hobbs, K.E., Hawkes, D.J., Colchester, A.C. (1991). Measurement of liver blood flow: a review. HPB SURG, 4 (894-8569 (Print), 3), 171-186.

1990

Hill, D.L.G., Hawkes, D.J., Lehmann, E.D., Crossman, J.E., Robinson, L., Bird, C.F., Maisey, M.N. (1990). Registered high resolution images in the interpretation of radionuclide scans.

1989

Seifalian, A.M., Hawkes, D.J., Colchester, A.C., Hobbs, K.E. (1989). A new algorithm for deriving pulsatile blood flow waveforms tested using stimulated dynamic angiographic data. NEURORADIOLOGY, 31 (028-3940 (Print), 3), 263-269.

1988

SEIFALIAN, A.M., HAWKES, D.J., COLCHESTER, A.C.F., HOBBS, K.E.F. (1988). COMPARISON OF PROCESSING TECHNIQUES FOR MEASUREMENT OF INTRAVASCULAR BLOOD-FLOW FROM SIMULATED DYNAMIC ANGIOGRAPHIC IMAGES. BRITISH JOURNAL OF RADIOLOGY, 61 (728), 721.

1987

HAWKES, D.J., FITZGERALD, M., BELLI, A., TILLER, G., STEWART, A. (1987). ACCEPTANCE TESTING AND QUALITY-CONTROL IN DIGITAL FLUOROGRAPHY.

1986

du Boulay, G.H., Brunt, J., Colchester, A., Hawkes, D., Wallis, A., Wicks, D. (1986). Volume flow measurement of pulsatile flow by digitised cine angiography.. Acta Radiologica, Supplement, 369 59-62.
Hawkes, D.J., Jackson, D.F., Parker, R.P. (1986). Tissue analysis by dual-energy computed tomography. BR J RADIOL, 59 (007-1285 (Print), 702), 537-542.

1983

Jackson, D.F., Hawkes, D.J. (1983). Energy dependence in the spectral factor approach to computed tomography. PHYS MED BIOL, 28 (031-9155 (Print), 3), 289-293.

1982

Husband, J.E., Hawkes, D.J., Peckham, M.J. (1982). CT estimations of mean attenuation values and volume in testicular tumors: A comparison with surgical and histologic findings. Radiology, 144 (3), 553-558. doi:10.1148/radiology.144.3.7100471
Husband, J.E., Hawkes, D.J., Peckham, M.J. (1982). CT estimations of mean attenuation values and volume in testicular tumors: a comparison with surgical and histologic findings. RADIOLOGY, 144 (033-8419 (Print), 3), 553-558.

1980

Hawkes, D.J., Jackson, D.F. (1980). An accurate parametrisation of the x-ray attenuation coefficient. PHYS MED BIOL, 25 (031-9155 (Print), 6), 1167-1171.
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