RegAladinParameters.h

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/*=============================================================================

  NifTK: A software platform for medical image computing.

  Copyright (c) University College London (UCL). All rights reserved.

  This software is distributed WITHOUT ANY WARRANTY; without even
  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  PURPOSE.

  See LICENSE.txt in the top level directory for details.

=============================================================================*/

#ifndef RegAladinParameters_h
#define RegAladinParameters_h

#include <QString>

#include "NiftyRegCommon.h"


class RegAladinParameters
{  

  public:  

    RegAladinParameters();
    virtual ~RegAladinParameters();

    void SetDefaultParameters();

    void PrintSelf( std::ostream& os );

    RegAladinParameters &operator=(const RegAladinParameters &p);

    QString referenceImageName; // -ref
    QString referenceImagePath; // -ref

    QString floatingImageName; // -flo
    QString floatingImagePath; // -flo

    QString referenceMaskName; // -rmask
    QString referenceMaskPath; // -rmask

    bool outputResultFlag;

    QString outputResultName; // -res
    QString outputResultPath; // -res

    bool outputAffineFlag;
    QString outputAffineName; // -aff

    // Aladin - Initialisation

    bool alignCenterFlag;        // -nac

    // Aladin - Method

    AffineRegistrationType regnType; // -rigOnly, -affDirect

    int maxiterationNumber;   // -maxit

    bool symFlag;   // -sym

    int block_percent_to_use; // -%v
    int inlier_lts;   // -%i

    // Aladin - Advanced

    InterpolationType interpolation;

};

#endif // RegAladinParameters_h