Include dependency graph for mitkOpenCVMaths.cxx:
Classes | |
| class | mitk::out_of_bounds |
Namespaces | |
| mitk | |
Functions | |
| std::vector< cv::Point3d > | mitk::SubtractPointFromPoints (const std::vector< cv::Point3d > listOfPoints, const cv::Point3d &point) |
| Subtracts a point (e.g. the centroid) from a list of points. More... | |
| std::vector< cv::Point3d > | mitk::PointSetToVector (const mitk::PointSet::Pointer &pointSet) |
| Converts mitk::PointSet to vector of cv::Point3d, but you lose the point ID contained within the mitk::PointSet. More... | |
| void | mitk::MakeIdentity (cv::Matx44d &outputMatrix) |
| Haven't found a direct method to do this yet. More... | |
| cv::Matx33d | mitk::CalculateCrossCovarianceH (const std::vector< cv::Point3d > &q, const std::vector< cv::Point3d > &qPrime) |
| Calculates 1/N Sum (q_i * qPrime_i^t) where q_i and qPrime_i are column vectors, so the product is a 3x3 matrix. More... | |
| bool | mitk::DoSVDPointBasedRegistration (const std::vector< cv::Point3d > &fixedPoints, const std::vector< cv::Point3d > &movingPoints, cv::Matx33d &H, cv::Point3d &p, cv::Point3d &pPrime, cv::Matx44d &outputMatrix, double &fiducialRegistrationError) |
| Helper method to do the main SVD bit of the point based registration, and handle the degenerate conditions mentioned in Aruns paper. More... | |
| double | mitk::CalculateFiducialRegistrationError (const std::vector< cv::Point3d > &fixedPoints, const std::vector< cv::Point3d > &movingPoints, const cv::Matx44d &matrix) |
| Calculates Fiducial Registration Error by multiplying the movingPoints by the matrix, and comparing with fixedPoints. More... | |
| double | mitk::CalculateFiducialRegistrationError (const mitk::PointSet::Pointer &fixedPointSet, const mitk::PointSet::Pointer &movingPointSet, vtkMatrix4x4 &vtkMatrix) |
| Converts format of input to call the other CalculateFiducialRegistrationError method. More... | |
| void | mitk::ConstructAffineMatrix (const cv::Matx31d &translation, const cv::Matx33d &rotation, cv::Matx44d &matrix) |
| Simply copies the translation vector and rotation matrix into the 4x4 matrix. More... | |
| void | mitk::CopyToVTK4x4Matrix (const cv::Matx44d &matrix, vtkMatrix4x4 &vtkMatrix) |
| Copies matrix to vtkMatrix. More... | |
| void | mitk::CopyToOpenCVMatrix (const vtkMatrix4x4 &matrix, cv::Matx44d &openCVMatrix) |
| Copies matrix to openCVMatrix. More... | |
| void | mitk::CopyToVTK4x4Matrix (const cv::Mat &input, vtkMatrix4x4 &output) |
| Copies to VTK matrix, throwing exceptions if input is not 4x4. More... | |
| void | mitk::CopyToOpenCVMatrix (const vtkMatrix4x4 &input, cv::Mat &output) |
| Copies to OpenCV matrix, throwing exceptions if output is not 4x4. More... | |
| void | mitk::CopyToOpenCVMatrix (const cv::Matx44d &matrix, cv::Mat &output) |
| Copies to OpenCV matrix, throwing exceptions if output is not 4x4. More... | |
| std::vector< mitk::WorldPoint > | mitk::operator* (const cv::Mat &M, const std::vector< mitk::WorldPoint > &p) |
| multiplies a set of points and corresponding scalar values by a 4x4 transformation matrix More... | |
| std::vector< mitk::WorldPoint > | mitk::operator* (const cv::Matx44d &M, const std::vector< mitk::WorldPoint > &p) |
| multiplies a set of points and corresponding scalar values by a 4x4 transformation matrix More... | |
| mitk::WorldPoint | mitk::operator* (const cv::Mat &M, const mitk::WorldPoint &p) |
| multiplies a point and corresponding scalar value by a 4x4 transformation matrix More... | |
| mitk::WorldPoint | mitk::operator* (const cv::Matx44d &M, const mitk::WorldPoint &p) |
| multiplies a point and corresponding scalar value by a 4x4 transformation matrix More... | |
| std::vector< cv::Point3d > | mitk::operator* (const cv::Mat &M, const std::vector< cv::Point3d > &p) |
| multiplies a set of points by a 4x4 transformation matrix More... | |
| std::vector< cv::Point3d > | mitk::operator* (const cv::Matx44d &M, const std::vector< cv::Point3d > &p) |
| multiplies a set of points by a 4x4 transformation matrix More... | |
| cv::Point3d | mitk::operator* (const cv::Mat &M, const cv::Point3d &p) |
| multiplies a point by a 4x4 transformation matrix More... | |
| cv::Point3d | mitk::operator* (const cv::Matx44d &M, const cv::Point3d &p) |
| multiplies a point by a 4x4 transformation matrix More... | |
| std::pair< cv::Point3d, cv::Point3d > | mitk::TransformPointPair (const cv::Matx44d &M, const std::pair< cv::Point3d, cv::Point3d > &p) |
| multiplies a point pair by a 4x4 transformation matrix More... | |
| bool | mitk::NearlyEqual (const cv::Point2d &p1, const cv::Point2d &p2, const double &tolerance) |
| Tests equality of 2 2d points. The openCV == operator struggles on floating points,. More... | |
| bool | mitk::NearlyEqual (const cv::Point3d &p1, const cv::Point3d &p2, const double &tolerance) |
| Tests equality of 2 3d points. The openCV == operator struggles on floating points,. More... | |
| bool | mitk::ImageHeadersEqual (const cv::Mat &m1, const cv::Mat &m2) |
| Tests whether two cv::Mat have the same header info (dimension and data type),. More... | |
| bool | mitk::ImageDataEqual (const cv::Mat &m1, const cv::Mat &m2, const double &tolerance) |
| Tests whether two cv::Mat have the same data. More... | |
| cv::Point2d | mitk::operator/ (const cv::Point2d &p, const int &n) |
| Divides a 2d point by an integer (x=x1/n, y=y1/2) More... | |
| cv::Point2d | mitk::operator* (const cv::Point2d &p1, const cv::Point2d &p2) |
| Multiplies the components of a 2d point by an integer (x=x1*x2, y=y1*y2) More... | |
| cv::Point2d | mitk::FindIntersect (const cv::Vec4i &line1, const cv::Vec4i &line2) |
| bool | mitk::PointInInterval (const cv::Point2d &point, const cv::Vec4i &interval) |
| bool | mitk::CheckIfLinesArePerpendicular (cv::Vec4i line1, cv::Vec4i line2, double tolerance) |
| double | mitk::AngleBetweenLines (cv::Vec4i line1, cv::Vec4i line2) |
| std::vector< cv::Point2d > | mitk::FindIntersects (const std::vector< cv::Vec4i > &lines, const bool &rejectIfPointNotOnBothLines, const bool &rejectIfNotPerpendicular, const double &angleTolerance) |
| cv::Point2d | mitk::GetCentroid (const std::vector< cv::Point2d > &points, bool RefineForOutliers=false, cv::Point2d *StandardDeviation=NULL) |
| Calculates the centroid of a vector of points. More... | |
| cv::Point3d | mitk::GetCentroid (const std::vector< cv::Point3d > &points, bool RefineForOutliers=false, cv::Point3d *StandardDeviation=NULL) |
| Calculates the centroid of a vector of points. More... | |
| cv::Matx33d | mitk::ConstructEulerRxMatrix (const double &rx) |
| Generates a rotation about X-axis, given a Euler angle in radians. More... | |
| cv::Matx33d | mitk::ConstructEulerRyMatrix (const double &ry) |
| Generates a rotation about Y-axis, given a Euler angle in radians. More... | |
| cv::Matx33d | mitk::ConstructEulerRzMatrix (const double &rz) |
| Generates a rotation about Z-axis, given a Euler angle in radians. More... | |
| cv::Matx33d | mitk::ConstructEulerRotationMatrix (const double &rx, const double &ry, const double &rz) |
| Generates a rotation matrix, given Euler angles in radians. More... | |
| cv::Matx13d | mitk::ConvertEulerToRodrigues (const double &rx, const double &ry, const double &rz) |
| Converts Euler angles in radians to the Rodrigues rotation vector (axis-angle convention) mentioned in OpenCV. More... | |
| cv::Matx44d | mitk::ConstructRigidTransformationMatrix (const double &rx, const double &ry, const double &rz, const double &tx, const double &ty, const double &tz) |
| From rotations in radians and translations in millimetres, constructs a 4x4 transformation matrix. More... | |
| cv::Matx44d | mitk::ConstructRodriguesTransformationMatrix (const double &r1, const double &r2, const double &r3, const double &tx, const double &ty, const double &tz) |
| From Rodrigues rotation parameters and translations in millimetres, constructs a 4x4 transformation matrix. More... | |
| cv::Matx44d | mitk::ConstructScalingTransformation (const double &sx, const double &sy, const double &sz=1) |
| Constructs a scaling matrix from sx, sy, sz where the scale factors simply appear on the diagonal. More... | |
| cv::Matx44d | mitk::ConstructSimilarityTransformationMatrix (const double &rx, const double &ry, const double &rz, const double &tx, const double &ty, const double &tz, const double &sx, const double &sy, const double &sz) |
| Constructs an affine transformation, without skew using the specified parameters, where rotations are in degrees. More... | |
| cv::Point3d | mitk::FindMinimumValues (std::vector< cv::Point3d > inputValues, cv::Point3i *indexes=NULL) |
| Takes a point vector and finds the minimum value in each dimension. Returns the minimum values. Optionally returns the indexes of the minium values. More... | |
| std::pair< double, double > | mitk::RMSError (std::vector< mitk::ProjectedPointPairsWithTimingError > measured, std::vector< mitk::ProjectedPointPairsWithTimingError > actual, int index=-1, cv::Point2d outlierSD=cv::Point2d(2.0, 2.0), long long allowableTimingError=30e6, bool duplicateLines=true) |
| Returns the RMS error between two projected point vectors. More... | |
| mitk::ProjectedPointPair | mitk::MeanError (std::vector< mitk::ProjectedPointPairsWithTimingError > measured, std::vector< mitk::ProjectedPointPairsWithTimingError > actual, mitk::ProjectedPointPair *StandardDeviations=NULL, int index=-1, long long allowableTimingError=30e6, bool duplicateLines=true) |
| Returns the mean pixel errors for the right and left sets of projected points. More... | |
| cv::Mat | mitk::PerturbTransform (const cv::Mat transformIn, const double tx, const double ty, const double tz, const double rx, const double ry, const double rz) |
| perturbs a 4x4 matrix with a 6 dof rigid transform. The transform is defined by three translations and 3 rotations, in Degrees More... | |
| cv::Point2d | mitk::FindNearestPoint (const cv::Point2d &point, const std::vector< cv::Point2d > &matchingPonints, double *minRatio=NULL, unsigned int *index=NULL) |
| Searches through vector of 2D points to find the one closest (by distance) to the passed point, and returns the index of that point. More... | |
| mitk::PickedObject | mitk::FindNearestPickedObject (const mitk::PickedObject &point, const std::vector< mitk::PickedObject > &matchingPoints, double *minRatio=NULL) |
| Searches through vector of 3D points and lines to find the one closest (by distance) to the passed point. Returns an empty PickedPoint if no point found. More... | |
| bool | mitk::DistanceCompare (const cv::Point2d &p1, const cv::Point2d &p2) |
| Compare two cv point based on their distance from 0,0. More... | |
| cv::Mat | mitk::Tracker2ToTracker1Rotation (const std::vector< cv::Mat > &Tracker1ToWorld1, const std::vector< cv::Mat > &World2ToTracker2, double &Residual) |
| works out the rigid rotation correspondence between two sets of corresponding rigid body transforms More... | |
| cv::Mat | mitk::Tracker2ToTracker1Translation (const std::vector< cv::Mat > &Tracker1ToWorld1, const std::vector< cv::Mat > &World2ToTracker2, double &Residual, const cv::Mat &rcg) |
| works out the rigid translation correspondence between two sets of corresponding rigid body transforms More... | |
| cv::Mat | mitk::Tracker2ToTracker1RotationAndTranslation (const std::vector< cv::Mat > &Tracker1ToWorld1, const std::vector< cv::Mat > &World2ToTracker2, std::vector< double > &Residuals, cv::Mat *World2ToWorld1=NULL) |
| works out the rigid rotation and translation correspondence between two sets of corresponding rigid body transforms More... | |
| cv::Mat | mitk::AverageMatrices (const std::vector< cv::Mat > &matrices) |
| find the average of a vector of 4x4 matrices More... | |
| std::vector< cv::Mat > | mitk::FlipMatrices (const std::vector< cv::Mat > matrices) |
| Flips the matrices in the vector from left handed coordinate system to right handed and vice versa. More... | |
| std::vector< int > | mitk::SortMatricesByDistance (const std::vector< cv::Mat > matrices) |
| Sorts the matrices based on the translations , and returns the order. More... | |
| std::vector< int > | mitk::SortMatricesByAngle (const std::vector< cv::Mat > matrices) |
| Sorts the matrices based on the rotations, and returns the order. More... | |
| double | mitk::AngleBetweenMatrices (cv::Mat Mat1, cv::Mat Mat2) |
| Returns the angular distance between two rotation matrices. More... | |
| double | mitk::DistanceBetweenMatrices (cv::Mat Mat1, cv::Mat Mat2) |
| Returns the distance between two 4x4 matrices. More... | |
| cv::Mat | mitk::DirectionCosineToQuaternion (cv::Mat dc_Matrix) |
| Converts a 3x3 rotation matrix to a quaternion. More... | |
| void | mitk::InvertRigid4x4Matrix (const CvMat &input, CvMat &output) |
| Specific method that inverts a matrix without SVD or decomposition, because the input is known to be orthonormal. More... | |
| void | mitk::InvertRigid4x4Matrix (const cv::Mat &input, cv::Mat &output) |
| Overloaded invert method that calls the C-looking one. More... | |
| void | mitk::InvertRigid4x4Matrix (const cv::Matx44d &input, cv::Matx44d &output) |
| Overloaded invert method that calls the C-looking one. More... | |
| void | mitk::InterpolateTransformationMatrix (const cv::Mat &before, const cv::Mat &after, const double &proportion, cv::Mat &output) |
| Interpolates between two matrices. More... | |
| void | mitk::InterpolateTransformationMatrix (const cv::Matx44d &before, const cv::Matx44d &after, const double &proportion, cv::Matx44d &output) |
| std::string | mitk::MatrixType (const cv::Mat &matrix) |
| returns the matrix type as a string More... | |
| bool | mitk::IsNaN (const cv::Point2d &) |
| check if point has a NaN value More... | |
| bool | mitk::IsNaN (const cv::Point3d &) |
| check if point has a NaN value More... | |
| bool | mitk::IsNotNaNorInf (const cv::Point2d &) |
| check if 2D point has a NaN or inf value More... | |
| bool | mitk::IsNotNaNorInf (const cv::Point3d &) |
| check if 3D point has a NaN or inf value More... | |
| double | mitk::DistanceToLine (const std::pair< cv::Point3d, cv::Point3d > &line, const cv::Point3d &point) |
| calculates the distance between a line and a point More... | |
| double | mitk::DistanceBetweenTwoPoints (const cv::Point3d &p1, const cv::Point3d &p2, cv::Point3d *delta=NULL) |
| calculates the distance between two points More... | |
| double | mitk::DistanceBetweenTwoSplines (const std::vector< cv::Point3d > &s0, const std::vector< cv::Point3d > &s1, unsigned int splineOrder, cv::Point3d *delta=NULL) |
| calculates the average shortest distance between two splines. More... | |
| double | mitk::DistanceToLineSegment (const std::pair< cv::Point3d, cv::Point3d > &line, const cv::Point3d &point, cv::Point3d *delta=NULL) |
| calculates the distance between a line segment and a point More... | |
| double | mitk::DistanceBetweenLines (const cv::Point3d &P0, const cv::Point3d &u, const cv::Point3d &Q0, const cv::Point3d &v, cv::Point3d &midpoint) |
| calculates the shortest distance between two lines More... | |
| double | mitk::DistanceBetweenLineAndSegment (const cv::Point3d &P0, const cv::Point3d &u, const cv::Point3d &x0, const cv::Point3d &x1, cv::Point3d &closestPointOnSecondLine) |
| calculates the shortest distance between a line and a segment the point must lie on the segment More... | |
| std::pair< cv::Point3d, cv::Point3d > | mitk::TwoPointsToPLambda (const std::pair< cv::Point3d, cv::Point3d > &twoPointLine) |
| converts a line defined by two points on the line to the same line defined by a single point and it's unit vector More... | |
| cv::Point3d | mitk::CrossProduct (const cv::Point3d &p1, const cv::Point3d &p2) |
| Calculates the cross product of two vectors (cv::Point3D) More... | |
| double | mitk::DotProduct (const cv::Point3d &p1, const cv::Point3d &p2) |
| Calculates the dot product of two vectors (cv::Point3D) More... | |
| double | mitk::Norm (const cv::Point3d &p1) |
| Calculates the norm product of a vectors (cv::Point3D) More... | |
| unsigned int | mitk::RemoveOutliers (std::vector< cv::Point3d > &points, const double &xLow, const double &xHigh, const double &yLow, const double &yHigh, const double &zLow, const double &zHigh) |
| Removes points outside the passed limits. More... | |
| unsigned int | mitk::RemoveOutliers (std::vector< std::pair< cv::Point3d, double > > &points, const double &xLow, const double &xHigh, const double &yLow, const double &yHigh, const double &zLow, const double &zHigh) |
| Removes points outside the passed limits. More... | |
| void | mitk::ExtractRigidBodyParameters (const vtkMatrix4x4 &matrix, mitk::Point3D &outputRodriguesRotationParameters, mitk::Point3D &outputTranslationParameters) |
| Decomposes a rigid body matrix into Rodrigues Rotations and Translations. More... | |
