itkBreastMaskSegmForBreastDensity.h

Go to the documentation of this file.

/*=============================================================================

  NifTK: A software platform for medical image computing.

  Copyright (c) University College London (UCL). All rights reserved.

  This software is distributed WITHOUT ANY WARRANTY; without even
  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  PURPOSE.

  See LICENSE.txt in the top level directory for details.

=============================================================================*/

#ifndef itkBreastMaskSegmForBreastDensity_h
#define itkBreastMaskSegmForBreastDensity_h

#include "itkBreastMaskSegmentationFromMRI.h"

namespace itk
{

template < const unsigned int ImageDimension = 3, class InputPixelType = float >
class ITK_EXPORT BreastMaskSegmForBreastDensity 
  : public BreastMaskSegmentationFromMRI< ImageDimension, InputPixelType >
{
public:
    
  typedef BreastMaskSegmForBreastDensity                                   Self;
  typedef BreastMaskSegmentationFromMRI< ImageDimension, InputPixelType >  Superclass;
  typedef SmartPointer<Self>                                               Pointer;
  typedef SmartPointer<const Self>                                         ConstPointer;

  itkNewMacro(Self); 
  itkTypeMacro( BreastMaskSegmForBreastDensity, BreastMaskSegmentationFromMRI );

  typedef typename Superclass::InternalImageType               InternalImageType;
  typedef typename Superclass::AxialImageType                  AxialImageType;
  typedef typename Superclass::PointSetType                    PointSetType;
  typedef typename Superclass::PointDataIterator               PointDataIterator;
  typedef typename Superclass::RealType                        RealType;
  typedef typename Superclass::IteratorType                    IteratorType;
  typedef typename Superclass::VectorType                      VectorType;
  typedef typename Superclass::LineIteratorType                LineIteratorType;
  typedef typename Superclass::SliceIteratorType               SliceIteratorType;

  typedef typename Superclass::ConnectedSurfaceVoxelFilterType ConnectedSurfaceVoxelFilterType;
  typedef typename Superclass::ThresholdingFilterType          ThresholdingFilterType;

  virtual void Execute( void );


protected:

  BreastMaskSegmForBreastDensity();

  ~BreastMaskSegmForBreastDensity();

  void MaskThePectoralMuscleAndLateralChestSkinSurface( bool flgIncludeChestSkinSurface,
                                                        RealType rYHeightOffset, 
              typename PointSetType::Pointer &pecPointSet,
              unsigned long &iPointPec );

private:

  BreastMaskSegmForBreastDensity(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented
  

};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkBreastMaskSegmForBreastDensity.txx"
#endif

#endif