itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage > Class Template Reference

Inheritance diagram for itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >:

Collaboration diagram for itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >:

Public Types
typedef SimpleKMeansClusteringImageFilter	Self
typedef ImageToImageFilter < TInputImage, TOutputImage >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage::Pointer	TInputImagePointer
typedef TInputMask::Pointer	TInputMaskPointer
typedef itk::Vector< double, 1 >	MeasurementVectorType
typedef itk::Statistics::ListSample < MeasurementVectorType >	SampleType
typedef itk::Statistics::WeightedCentroidKdTreeGenerator < SampleType >	TreeGeneratorType
typedef TreeGeneratorType::KdTreeType	TreeType
typedef itk::Statistics::KdTreeBasedKmeansEstimator < TreeType >	EstimatorType
typedef EstimatorType::ParametersType	ParametersType

Public Member Functions
virtual const char *	GetClassName () const
virtual void	SetInputMask (TInputMaskPointer _arg)
virtual TInputMaskPointer	GetInputMask ()
virtual void	SetNumberOfClasses (unsigned int _arg)
virtual unsigned int	GetNumberOfClasses ()
virtual void	SetInitialMeans (ParametersType _arg)
virtual ParametersType	GetInitialMeans ()
virtual ParametersType	GetFinalMeans ()
virtual ParametersType	GetFinalStds ()
virtual double	GetRSS ()
virtual double	GetNumberOfSamples ()
virtual ParametersType	GetFinalClassSizes ()
virtual void	SetIsEstimateInitValuesUsingMask (bool _arg)

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	SimpleKMeansClusteringImageFilter ()
virtual	~SimpleKMeansClusteringImageFilter ()
void	GenerateData ()
void	EstimateIntensityFromDilatedMask (double &csfMean, double &csfSd, double &gmMean, double &wmMean)

Detailed Description

template<class TInputImage, class TInputMask, class TOutputImage>
class itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >

K-Means clustering with a mask.

Member Typedef Documentation

template<class TInputImage , class TInputMask , class TOutputImage >

typedef SmartPointer<const Self> itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::ConstPointer

template<class TInputImage , class TInputMask , class TOutputImage >

typedef itk::Statistics::KdTreeBasedKmeansEstimator<TreeType> itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::EstimatorType

template<class TInputImage , class TInputMask , class TOutputImage >

typedef itk::Vector< double, 1 > itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::MeasurementVectorType

template<class TInputImage , class TInputMask , class TOutputImage >

typedef EstimatorType::ParametersType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::ParametersType

template<class TInputImage , class TInputMask , class TOutputImage >

typedef SmartPointer<Self> itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::Pointer

template<class TInputImage , class TInputMask , class TOutputImage >

typedef itk::Statistics::ListSample< MeasurementVectorType > itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SampleType

template<class TInputImage , class TInputMask , class TOutputImage >

typedef SimpleKMeansClusteringImageFilter itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::Self

House keeping for the object factory.

template<class TInputImage , class TInputMask , class TOutputImage >

typedef ImageToImageFilter<TInputImage,TOutputImage> itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::Superclass

template<class TInputImage , class TInputMask , class TOutputImage >

typedef TInputImage::Pointer itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::TInputImagePointer

Typedefs.

template<class TInputImage , class TInputMask , class TOutputImage >

typedef TInputMask::Pointer itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::TInputMaskPointer

template<class TInputImage , class TInputMask , class TOutputImage >

typedef itk::Statistics::WeightedCentroidKdTreeGenerator<SampleType> itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::TreeGeneratorType

template<class TInputImage , class TInputMask , class TOutputImage >

typedef TreeGeneratorType::KdTreeType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::TreeType

Constructor & Destructor Documentation

template<class TInputImage , class TInputMask , class TOutputImage >

itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SimpleKMeansClusteringImageFilter ( )

inlineprotected

Constructor.

template<class TInputImage , class TInputMask , class TOutputImage >

virtual itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::~SimpleKMeansClusteringImageFilter ( )

inlineprotectedvirtual

Destructor.

Member Function Documentation

template<class TInputImage , class TInputMask , class TOutputImage >

void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::EstimateIntensityFromDilatedMask ( double &  csfMean, double &  csfSd, double &  gmMean, double &  wmMean  )

protected

Roughly estiamte the tissue intensity using the mask.

template<class TInputImage , class TInputMask , class TOutputImage >

void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GenerateData ( )

protected

Do k-means.

template<class TInputImage , class TInputMask , class TOutputImage >

virtual const char* itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetClassName ( ) const

virtual

Runtime information support.

template<class TInputImage , class TInputMask , class TOutputImage >

virtual ParametersType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetFinalClassSizes ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual ParametersType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetFinalMeans ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual ParametersType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetFinalStds ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual ParametersType itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetInitialMeans ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual TInputMaskPointer itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetInputMask ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual unsigned int itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetNumberOfClasses ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual double itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetNumberOfSamples ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual double itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::GetRSS ( )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

static Pointer itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::New ( )

static

Method for creation through the object factory.

template<class TInputImage , class TInputMask , class TOutputImage >

virtual void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SetInitialMeans ( ParametersType  _arg )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SetInputMask ( TInputMaskPointer  _arg )

virtual

Get/Set functions.

template<class TInputImage , class TInputMask , class TOutputImage >

virtual void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SetIsEstimateInitValuesUsingMask ( bool  _arg )

virtual

template<class TInputImage , class TInputMask , class TOutputImage >

virtual void itk::SimpleKMeansClusteringImageFilter< TInputImage, TInputMask, TOutputImage >::SetNumberOfClasses ( unsigned int  _arg )

virtual

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The documentation for this class was generated from the following file:

• itkSimpleKMeansClusteringImageFilter.h