itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage > Class Template Reference

calculate the mean intensity within a binary mask (region). More...

Inheritance diagram for itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >:

Collaboration diagram for itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >:

Public Types
typedef MIDASMeanIntensityWithinARegionFilter	Self
typedef ImageToImageFilter < TInputImage1, TOutputImage >	SuperClass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage1	InputMainImageType
typedef InputMainImageType::ConstPointer	InputMainImageConstPointer
typedef InputMainImageType::Pointer	InputMainImagePointer
typedef InputMainImageType::RegionType	InputMainImageRegionType
typedef InputMainImageType::PixelType	InputMainImagePixelType
typedef InputMainImageType::IndexType	InputMainImageIndexType
typedef InputMainImageType::SizeType	InputMainImageSizeType
typedef TInputImage2	InputMaskImageType
typedef InputMaskImageType::ConstPointer	InputMaskImageConstPointer
typedef InputMaskImageType::Pointer	InputMaskImagePointer
typedef InputMaskImageType::RegionType	InputMaskImageRegionType
typedef InputMaskImageType::PixelType	InputMaskImagePixelType
typedef InputMaskImageType::IndexType	InputMaskImageIndexType
typedef InputMaskImageType::SizeType	InputMaskImageSizeType
typedef TInputImage1	OutputImageType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef OutputImageType::SizeType	OutputImageSizeType
typedef OutputImageType::IndexType	OutputImageIndexType

Public Member Functions
virtual const char *	GetClassName () const
void	SetGreyScaleImageInput (const InputMainImageType *image)
void	SetBinaryImageInput (const InputMaskImageType *image)
double	GetMeanIntensityMainImage ()
unsigned long int	GetCount ()
virtual void	SetInValue (InputMaskImagePixelType _arg)
virtual InputMaskImagePixelType	GetInValue () const

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	MIDASMeanIntensityWithinARegionFilter ()
virtual	~MIDASMeanIntensityWithinARegionFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
virtual void	ThreadedGenerateData (const InputMainImageRegionType &outputRegionForThread, ThreadIdType ThreadID)
virtual void	AfterThreadedGenerateData ()

Detailed Description

template<class TInputImage1, class TInputImage2, class TOutputImage>
class itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >

calculate the mean intensity within a binary mask (region).

MIDASMeanIntensityWithinARegionFilter has two input images and one output image. The first input is specified using SetGreyScaleImageInput(), and should be grey scale, and the second input is specified using SetBinaryImageInput and should be a binary mask. The output is a copy of the input binary mask.

Member Typedef Documentation

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef SmartPointer<const Self> itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::ConstPointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::ConstPointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImageConstPointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::IndexType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImageIndexType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::PixelType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImagePixelType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::Pointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImagePointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::RegionType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImageRegionType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMainImageType::SizeType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImageSizeType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef TInputImage1 itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMainImageType

Some additional typedefs

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::ConstPointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImageConstPointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::IndexType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImageIndexType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::PixelType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImagePixelType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::Pointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImagePointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::RegionType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImageRegionType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef InputMaskImageType::SizeType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImageSizeType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef TInputImage2 itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::InputMaskImageType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef OutputImageType::IndexType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::OutputImageIndexType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef OutputImageType::Pointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::OutputImagePointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef OutputImageType::RegionType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::OutputImageRegionType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef OutputImageType::SizeType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::OutputImageSizeType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef TInputImage1 itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::OutputImageType

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef SmartPointer<Self> itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::Pointer

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef MIDASMeanIntensityWithinARegionFilter itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::Self

Standard class typedefs

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

typedef ImageToImageFilter<TInputImage1, TOutputImage> itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::SuperClass

Constructor & Destructor Documentation

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::MIDASMeanIntensityWithinARegionFilter ( )

protected

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::~MIDASMeanIntensityWithinARegionFilter ( )

inlineprotectedvirtual

Member Function Documentation

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::AfterThreadedGenerateData ( )

protectedvirtual

Do all the final calculations and other general stuff after the threads finish executing

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::AllocateOutputs ( )

protected

Pass the input through unmodified. Do this by Grafting in the AllocateOutputs method.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::BeforeThreadedGenerateData ( )

protectedvirtual

Do all initialization and other general stuff before starting the threads

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual const char* itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::GetClassName ( ) const

virtual

Run-time type information (and related methods)

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

unsigned long int itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::GetCount

(

)

Method that retrieves the number of pixels that contributed to the mean, which is only valid after a successful Update() has been called.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual InputMaskImagePixelType itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::GetInValue ( ) const

virtual

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

double itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::GetMeanIntensityMainImage

(

)

Method that retrieves the region mean, which is only valid after a successful Update() has been called.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

static Pointer itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::New ( )

static

Method for creation through the object factory

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protected

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::SetBinaryImageInput

(

const InputMaskImageType *

image

)

Set the second input, which is the binary mask, that will be eroded/dilated.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::SetGreyScaleImageInput

(

const InputMainImageType *

image

)

Set the first input, for the grey scale image.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::SetInValue ( InputMaskImagePixelType  _arg )

virtual

Set/Get the mask value that is considered 'inside' the region. Masks are normally [0,1], or [0,255], where 1 or 255 are considered within the region.

template<class TInputImage1 , class TInputImage2 , class TOutputImage >

virtual void itk::MIDASMeanIntensityWithinARegionFilter< TInputImage1, TInputImage2, TOutputImage >::ThreadedGenerateData ( const InputMainImageRegionType &  outputRegionForThread, ThreadIdType  ThreadID  )

protectedvirtual

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The documentation for this class was generated from the following file:

• itkMIDASMeanIntensityWithinARegionFilter.h