NifTK
16.4.1 - 0798f20
CMIC's Translational Medical Imaging Platform
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Assumes input is GM, WM, CSF labelled image, and adds 1 layer of GM to the WM, which means that the output will have the same size WM, only 1 voxel wide layer of GM, and the rest is then all CSF. More...
Public Member Functions | |
virtual const char * | GetClassName () const |
virtual unsigned long int | GetNumberOfGreyInBoundaryLayer () |
virtual unsigned long int | GetNumberOfGreyLeftOutsideBoundaryLayer () |
Public Member Functions inherited from itk::BaseCTESegmentationFilter< TImageType > | |
virtual void | SetTrustPVMaps (bool _arg) |
virtual bool | GetTrustPVMaps () |
Public Member Functions inherited from itk::BaseCTEFilter< TImageType > | |
itkStaticConstMacro (Dimension, unsigned int, TImageType::ImageDimension) | |
virtual InputPixelType | GetGreyMatterLabel () |
virtual InputPixelType | GetWhiteMatterLabel () |
virtual InputPixelType | GetExtraCerebralMatterLabel () |
void | SetLabelThresholds (InputPixelType greyMatterLabel, InputPixelType whiteMatterLabel, InputPixelType extraCerebralMatterLabel) |
virtual bool | GetUserHasSetTheLabelThresholds () |
Static Public Member Functions | |
static Pointer | New () |
Additional Inherited Members | |
Protected Attributes inherited from itk::BaseCTEFilter< TImageType > | |
InputPixelType | m_GreyMatterLabel |
InputPixelType | m_WhiteMatterLabel |
InputPixelType | m_ExtraCerebralMatterLabel |
bool | m_UserHasSetTheLabelThresholds |
Assumes input is GM, WM, CSF labelled image, and adds 1 layer of GM to the WM, which means that the output will have the same size WM, only 1 voxel wide layer of GM, and the rest is then all CSF.
This is inspired by Hutton et. al. NeuroImage 2008, doi:10.1016/j.neuroimage.2008.01.027, in the section of 'Preserving cortical topography'.
typedef SmartPointer<const Self> itk::AddOneLayerOfGreyMatterFilter< TImageType >::ConstPointer |
typedef Superclass::InputImageConstPointer itk::AddOneLayerOfGreyMatterFilter< TImageType >::InputImageConstPointer |
typedef Superclass::InputImagePointer itk::AddOneLayerOfGreyMatterFilter< TImageType >::InputImagePointer |
typedef Superclass::InputImageType itk::AddOneLayerOfGreyMatterFilter< TImageType >::InputImageType |
Image typedef support.
typedef Superclass::InputIndexType itk::AddOneLayerOfGreyMatterFilter< TImageType >::InputIndexType |
typedef Superclass::InputPixelType itk::AddOneLayerOfGreyMatterFilter< TImageType >::InputPixelType |
typedef Superclass::OutputImageConstPointer itk::AddOneLayerOfGreyMatterFilter< TImageType >::OutputImageConstPointer |
typedef Superclass::OutputImagePointer itk::AddOneLayerOfGreyMatterFilter< TImageType >::OutputImagePointer |
typedef Superclass::OutputImageType itk::AddOneLayerOfGreyMatterFilter< TImageType >::OutputImageType |
typedef Superclass::OutputPixelType itk::AddOneLayerOfGreyMatterFilter< TImageType >::OutputPixelType |
typedef SmartPointer<Self> itk::AddOneLayerOfGreyMatterFilter< TImageType >::Pointer |
typedef AddOneLayerOfGreyMatterFilter itk::AddOneLayerOfGreyMatterFilter< TImageType >::Self |
Standard "Self" & Superclass typedef.
typedef BaseCTESegmentationFilter<TImageType> itk::AddOneLayerOfGreyMatterFilter< TImageType >::Superclass |
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protectedvirtual |
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Run-time type information (and related methods)
Reimplemented from itk::BaseCTESegmentationFilter< TImageType >.
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Get the number of grey voxels in boundary layer
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Get the number of grey voxels left outside boundary layer.
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Method for creation through the object factory.
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protectedvirtual |
Standard Print Self.
Reimplemented from itk::BaseCTESegmentationFilter< TImageType >.