itk::MaskedImageRegistrationMethod< TInputImageType > Class Template Reference

Base class for NifTK Image Registration Methods employing a binary mask. More...

Inheritance diagram for itk::MaskedImageRegistrationMethod< TInputImageType >:

Collaboration diagram for itk::MaskedImageRegistrationMethod< TInputImageType >:

Public Types
typedef MaskedImageRegistrationMethod	Self
typedef SingleResolutionImageRegistrationMethod < TInputImageType, TInputImageType >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImageType	InputImageType
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::RegionType	InputImageRegionType
typedef InputImageType::SizeType	InputImageSizeType
typedef InputImageType::IndexType	InputImageIndexType
typedef InputImageType::SpacingType	InputImageSpacingType
typedef InputImageType::PointType	InputImageOriginType
typedef InputImageType::DirectionType	InputImageDirectionType
typedef BoundaryValueRescaleIntensityImageFilter < InputImageType >	RescaleFilterType
typedef RescaleFilterType::Pointer	RescaleFilterPointer
typedef SmoothingRecursiveGaussianImageFilter < InputImageType, InputImageType >	SmoothingFilterType
typedef SmoothingFilterType::Pointer	SmoothingFilterPointer
typedef BinaryThresholdImageFilter < InputImageType, InputImageType >	ThresholdFilterType
typedef ThresholdFilterType::Pointer	ThresholdFilterPointer
typedef BinaryCrossStructuringElement < InputImagePixelType, InputImageType::ImageDimension >	StructuringType
typedef BinaryDilateImageFilter < InputImageType, InputImageType, StructuringType >	DilateMaskFilterType
typedef DilateMaskFilterType::Pointer	DilateMaskFilterPointer
typedef MultiplyImageFilter < InputImageType, InputImageType >	MultiplyFilterType
typedef MultiplyFilterType::Pointer	MultiplyFilterPointer
typedef unsigned char	MaskPixelType
typedef Image< MaskPixelType, InputImageType::ImageDimension >	MaskImageType
typedef CastImageFilter < InputImageType, MaskImageType >	CastToMaskImageTypeFilterType
typedef CastToMaskImageTypeFilterType::Pointer	CastToMaskImageTypeFilterPointer
typedef ImageMaskSpatialObject < InputImageType::ImageDimension >	MaskFilterType
typedef MaskFilterType::Pointer	MaskFilterPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
typedef SingleResolutionImageRegistrationMethod	Self
typedef ImageRegistrationMethod < TInputImageType, TInputImageType >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef itk::IterationUpdateCommand	IterationUpdateCommandType
typedef IterationUpdateCommandType::Pointer	IterationUpdateCommandPointer
typedef Superclass::ParametersType	ParametersType
typedef Superclass::TransformType	TransformType
typedef Superclass::InterpolatorType	InterpolatorType

Public Member Functions
virtual const char *	GetClassName () const
void	SetFixedMask (const InputImageType *fixedMask)
virtual const InputImageType *	GetFixedMask ()
void	SetMovingMask (const InputImageType *movingMask)
virtual const InputImageType *	GetMovingMask ()
virtual void	SetUseFixedMask (bool _arg)
virtual bool	GetUseFixedMask () const
virtual void	SetUseMovingMask (bool _arg)
virtual bool	GetUseMovingMask () const
virtual void	SetNumberOfDilations (unsigned int _arg)
virtual unsigned int	GetNumberOfDilations ()
virtual void	SetMaskImageDirectly (bool _arg)
virtual bool	GetMaskImageDirectly ()
virtual void	SetRescaleFixedImage (bool _arg)
virtual bool	GetRescaleFixedImage () const
virtual void	SetRescaleFixedMinimum (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleFixedMinimum () const
virtual void	SetRescaleFixedMaximum (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleFixedMaximum () const
virtual void	SetRescaleFixedBoundaryValue (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleFixedBoundaryValue () const
virtual void	SetRescaleFixedLowerThreshold (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleFixedLowerThreshold () const
virtual void	SetRescaleFixedUpperThreshold (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleFixedUpperThreshold () const
virtual void	SetRescaleMovingImage (bool _arg)
virtual bool	GetRescaleMovingImage () const
virtual void	SetRescaleMovingMinimum (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleMovingMinimum () const
virtual void	SetRescaleMovingMaximum (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleMovingMaximum () const
virtual void	SetRescaleMovingBoundaryValue (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleMovingBoundaryValue () const
virtual void	SetRescaleMovingLowerThreshold (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleMovingLowerThreshold () const
virtual void	SetRescaleMovingUpperThreshold (InputImagePixelType _arg)
virtual InputImagePixelType	GetRescaleMovingUpperThreshold () const
virtual void	SetThresholdFixedMask (bool _arg)
virtual bool	GetThresholdFixedMask () const
virtual void	SetFixedMaskMinimum (InputImagePixelType _arg)
virtual InputImagePixelType	GetFixedMaskMinimum () const
virtual void	SetFixedMaskMaximum (InputImagePixelType _arg)
virtual InputImagePixelType	GetFixedMaskMaximum () const
virtual void	SetThresholdMovingMask (bool _arg)
virtual bool	GetThresholdMovingMask () const
virtual void	SetMovingMaskMinimum (InputImagePixelType _arg)
virtual InputImagePixelType	GetMovingMaskMinimum () const
virtual void	SetMovingMaskMaximum (InputImagePixelType _arg)
virtual InputImagePixelType	GetMovingMaskMaximum () const
virtual void	SetSigma (float _arg)
virtual float	GetSigma ()
InputImageType *	GetFixedImageCopy ()
InputImageType *	GetMovingImageCopy ()
Public Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
virtual void	SetIterationUpdateCommand (IterationUpdateCommandType *_arg)
virtual IterationUpdateCommandType *	GetIterationUpdateCommand ()
virtual void	SetFixedImageInterpolator (InterpolatorType *_arg)
virtual void	SetMovingImageInterpolator (InterpolatorType *_arg)
virtual InterpolatorType *	GetFixedImageInterpolator ()
virtual InterpolatorType *	GetMovingImageInterpolator ()

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
static Pointer	New ()

Protected Member Functions
	MaskedImageRegistrationMethod ()
virtual	~MaskedImageRegistrationMethod ()
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	Initialize () throw (ExceptionObject)
void	CopyImage (const InputImageType *source, InputImageType *target)
Protected Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
	SingleResolutionImageRegistrationMethod ()
virtual	~SingleResolutionImageRegistrationMethod ()
void	PrintSelf (std::ostream &os, Indent indent) const
void	GenerateData ()
virtual void	DoRegistration () throw (ExceptionObject)

Additional Inherited Members
Protected Attributes inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
InterpolatorType::Pointer	m_FixedImageInterpolator
InterpolatorType::Pointer	m_MovingImageInterpolator

Detailed Description

template<typename TInputImageType>
class itk::MaskedImageRegistrationMethod< TInputImageType >

Base class for NifTK Image Registration Methods employing a binary mask.

This Class extends the SingleResolutionImageRegistrationMethod, with inputs for a fixed and moving mask. This class provides for thresholding the mask, dilating the mask a number of times and optionally multiplying it by the input image, or just setting it on the similarity measure.

The threshold, dilating, masking is all applied within the Initialize() method, at then end of which, the Initialize methods calls SetFixedImage and SetMovingImage with the resultant images.

We also take and store a copy of the original Fixed and Moving image so that subclasses can have access to it. For example, block matching needs a masked image to decide which sets of points to use, but then when its doing the match, it always wants unmasked images.

See also

MultiResolutionImageRegistrationWrapper

Member Typedef Documentation

template<typename TInputImageType>

typedef CastToMaskImageTypeFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::CastToMaskImageTypeFilterPointer

template<typename TInputImageType>

typedef CastImageFilter<InputImageType, MaskImageType > itk::MaskedImageRegistrationMethod< TInputImageType >::CastToMaskImageTypeFilterType

template<typename TInputImageType>

typedef SmartPointer<const Self> itk::MaskedImageRegistrationMethod< TInputImageType >::ConstPointer

template<typename TInputImageType>

typedef DilateMaskFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::DilateMaskFilterPointer

template<typename TInputImageType>

typedef BinaryDilateImageFilter<InputImageType, InputImageType, StructuringType> itk::MaskedImageRegistrationMethod< TInputImageType >::DilateMaskFilterType

template<typename TInputImageType>

typedef InputImageType::ConstPointer itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageConstPointer

template<typename TInputImageType>

typedef InputImageType::DirectionType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageDirectionType

template<typename TInputImageType>

typedef InputImageType::IndexType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageIndexType

template<typename TInputImageType>

typedef InputImageType::PointType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageOriginType

template<typename TInputImageType>

typedef InputImageType::PixelType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImagePixelType

template<typename TInputImageType>

typedef InputImageType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::InputImagePointer

template<typename TInputImageType>

typedef InputImageType::RegionType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageRegionType

template<typename TInputImageType>

typedef InputImageType::SizeType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageSizeType

template<typename TInputImageType>

typedef InputImageType::SpacingType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageSpacingType

template<typename TInputImageType>

typedef TInputImageType itk::MaskedImageRegistrationMethod< TInputImageType >::InputImageType

Type of the input image.

template<typename TInputImageType>

typedef MaskFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::MaskFilterPointer

template<typename TInputImageType>

typedef ImageMaskSpatialObject< InputImageType::ImageDimension > itk::MaskedImageRegistrationMethod< TInputImageType >::MaskFilterType

template<typename TInputImageType>

typedef Image<MaskPixelType, InputImageType::ImageDimension> itk::MaskedImageRegistrationMethod< TInputImageType >::MaskImageType

template<typename TInputImageType>

typedef unsigned char itk::MaskedImageRegistrationMethod< TInputImageType >::MaskPixelType

Note that the ImageMaskSpatialObject types need unsigned char.

template<typename TInputImageType>

typedef MultiplyFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::MultiplyFilterPointer

template<typename TInputImageType>

typedef MultiplyImageFilter<InputImageType, InputImageType> itk::MaskedImageRegistrationMethod< TInputImageType >::MultiplyFilterType

Optionally, we multiply the mask with the input, or we pass it into ImageMaskSpatialObject.

template<typename TInputImageType>

typedef SmartPointer<Self> itk::MaskedImageRegistrationMethod< TInputImageType >::Pointer

template<typename TInputImageType>

typedef RescaleFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::RescaleFilterPointer

template<typename TInputImageType>

typedef BoundaryValueRescaleIntensityImageFilter<InputImageType> itk::MaskedImageRegistrationMethod< TInputImageType >::RescaleFilterType

This class provides rescaling of inputs. This is useful, for example if you are doing NMI based registration, and want to rescale inputs to match a histogram size, or for example, if you are doing similarity measures like CC, RIU, or PIU where the magnitude of the scalar values will impact the sensitivity of the registration algorithm.

template<typename TInputImageType>

typedef MaskedImageRegistrationMethod itk::MaskedImageRegistrationMethod< TInputImageType >::Self

Standard class typedefs.

template<typename TInputImageType>

typedef SmoothingFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::SmoothingFilterPointer

template<typename TInputImageType>

typedef SmoothingRecursiveGaussianImageFilter<InputImageType, InputImageType > itk::MaskedImageRegistrationMethod< TInputImageType >::SmoothingFilterType

Now added smoothing, after rescaling.

template<typename TInputImageType>

typedef BinaryCrossStructuringElement<InputImagePixelType, InputImageType::ImageDimension> itk::MaskedImageRegistrationMethod< TInputImageType >::StructuringType

Then we dilate it a number of times.

template<typename TInputImageType>

typedef SingleResolutionImageRegistrationMethod<TInputImageType, TInputImageType> itk::MaskedImageRegistrationMethod< TInputImageType >::Superclass

template<typename TInputImageType>

typedef ThresholdFilterType::Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::ThresholdFilterPointer

template<typename TInputImageType>

typedef BinaryThresholdImageFilter<InputImageType, InputImageType> itk::MaskedImageRegistrationMethod< TInputImageType >::ThresholdFilterType

Threshold mask to 0 and 1, just in case its not binary already.

template<typename TInputImageType>

typedef Superclass::TransformType itk::MaskedImageRegistrationMethod< TInputImageType >::TransformType

Constructor & Destructor Documentation

template<typename TInputImageType>

itk::MaskedImageRegistrationMethod< TInputImageType >::MaskedImageRegistrationMethod ( )

protected

template<typename TInputImageType>

virtual itk::MaskedImageRegistrationMethod< TInputImageType >::~MaskedImageRegistrationMethod ( )

inlineprotectedvirtual

Member Function Documentation

template<typename TInputImageType>

void itk::MaskedImageRegistrationMethod< TInputImageType >::CopyImage ( const InputImageType *  source, InputImageType *  target  )

protected

Just to copy image.

template<typename TInputImageType>

virtual const char* itk::MaskedImageRegistrationMethod< TInputImageType >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >.

Reimplemented in itk::BlockMatchingMethod< TImageType, TScalarType >, itk::MultiStageImageRegistrationMethod< TInputImageType >, itk::TranslateRotateScaleImageRegistrationMethod< TInputImageType >, itk::TranslationThenRotationImageRegistrationMethod< TInputImageType >, and itk::RigidPlusScaleImageRegistrationMethod< TInputImageType >.

template<typename TInputImageType>

InputImageType* itk::MaskedImageRegistrationMethod< TInputImageType >::GetFixedImageCopy

(

)

Get the fixed image copy. Lazy Initialized.

template<typename TInputImageType>

virtual const InputImageType* itk::MaskedImageRegistrationMethod< TInputImageType >::GetFixedMask ( )

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetFixedMaskMaximum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetFixedMaskMinimum ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetMaskImageDirectly ( )

virtual

template<typename TInputImageType>

InputImageType* itk::MaskedImageRegistrationMethod< TInputImageType >::GetMovingImageCopy

(

)

Get the moving image copy. Lazy Initialized.

template<typename TInputImageType>

virtual const InputImageType* itk::MaskedImageRegistrationMethod< TInputImageType >::GetMovingMask ( )

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetMovingMaskMaximum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetMovingMaskMinimum ( ) const

virtual

template<typename TInputImageType>

virtual unsigned int itk::MaskedImageRegistrationMethod< TInputImageType >::GetNumberOfDilations ( )

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedBoundaryValue ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedImage ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedLowerThreshold ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedMaximum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedMinimum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleFixedUpperThreshold ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingBoundaryValue ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingImage ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingLowerThreshold ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingMaximum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingMinimum ( ) const

virtual

template<typename TInputImageType>

virtual InputImagePixelType itk::MaskedImageRegistrationMethod< TInputImageType >::GetRescaleMovingUpperThreshold ( ) const

virtual

template<typename TInputImageType>

virtual float itk::MaskedImageRegistrationMethod< TInputImageType >::GetSigma ( )

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetThresholdFixedMask ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetThresholdMovingMask ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetUseFixedMask ( ) const

virtual

template<typename TInputImageType>

virtual bool itk::MaskedImageRegistrationMethod< TInputImageType >::GetUseMovingMask ( ) const

virtual

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::Initialize ( ) throw ( ExceptionObject )

protectedvirtual

Override this method to wire everything together.

Reimplemented from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >.

Reimplemented in itk::BlockMatchingMethod< TImageType, TScalarType >.

template<typename TInputImageType>

static Pointer itk::MaskedImageRegistrationMethod< TInputImageType >::New ( )

static

Method for creation through the object factory.

template<typename TInputImageType>

void itk::MaskedImageRegistrationMethod< TInputImageType >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protected

template<typename TInputImageType>

void itk::MaskedImageRegistrationMethod< TInputImageType >::SetFixedMask

(

const InputImageType *

fixedMask

)

Set/Get the Fixed mask.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetFixedMaskMaximum ( InputImagePixelType  _arg )

virtual

Upper limit to threshold at.

Defaults to maximum for pixel type.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetFixedMaskMinimum ( InputImagePixelType  _arg )

virtual

Lower limit to threshold mask at.

Defaults to 1.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetMaskImageDirectly ( bool  _arg )

virtual

If this is true, we multiply the mask by the image, and only give the single resolution method, an already masked image. If this is false, we leave the image as it is, and set the mask onto the single res method. You probably want true for deformable stuff, and false for affine stuff. Default false.

template<typename TInputImageType>

void itk::MaskedImageRegistrationMethod< TInputImageType >::SetMovingMask

(

const InputImageType *

movingMask

)

Set/Get the Moving mask.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetMovingMaskMaximum ( InputImagePixelType  _arg )

virtual

Upper limit to threshold at.

Defaults to maximum for pixel type.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetMovingMaskMinimum ( InputImagePixelType  _arg )

virtual

Lower limit to threshold at.

Defaults to 1.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetNumberOfDilations ( unsigned int  _arg )

virtual

Set the number of mask dilations.

Default is zero.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedBoundaryValue ( InputImagePixelType  _arg )

virtual

Set the boundary value for if we want to do thresholding.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedImage ( bool  _arg )

virtual

Turns image rescaling of the fixed image off or on. If you turn it on, you should also set the Min/Max values you want to rescale to, as they default to 0,255.

Default is off.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedLowerThreshold ( InputImagePixelType  _arg )

virtual

Set the lower threshold, so we can mask these values out before rescaling.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedMaximum ( InputImagePixelType  _arg )

virtual

Set the Maximum rescale value for the fixed image.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedMinimum ( InputImagePixelType  _arg )

virtual

Set the minimum rescale value for the fixed image.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleFixedUpperThreshold ( InputImagePixelType  _arg )

virtual

Set the upper threshold, so we can mask these values out before rescaling.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingBoundaryValue ( InputImagePixelType  _arg )

virtual

Set the boundary value for if we want to do thresholding.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingImage ( bool  _arg )

virtual

Turns image rescaling of the moving image off or on. If you turn it on, you should also set the Min/Max values you want to rescale to as they default to 0,255.

Default is off.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingLowerThreshold ( InputImagePixelType  _arg )

virtual

Set the lower threshold, so we can mask these values out before rescaling.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingMaximum ( InputImagePixelType  _arg )

virtual

Set the Maximum rescale value for the moving image.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingMinimum ( InputImagePixelType  _arg )

virtual

Set the minimum rescale value for the moving image.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetRescaleMovingUpperThreshold ( InputImagePixelType  _arg )

virtual

Set the upper threshold, so we can mask these values out before rescaling.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetSigma ( float  _arg )

virtual

Set the Sigma for Gaussian smoothing.

Default 0.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetThresholdFixedMask ( bool  _arg )

virtual

Threshold fixed mask.

Defaults to true.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetThresholdMovingMask ( bool  _arg )

virtual

Threshold moving mask.

Defaults to true.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetUseFixedMask ( bool  _arg )

virtual

Turns whether we are using the fixed mask at all.

Default is off.

template<typename TInputImageType>

virtual void itk::MaskedImageRegistrationMethod< TInputImageType >::SetUseMovingMask ( bool  _arg )

virtual

Turns whether we are using the moving mask at all.

Default is off.

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The documentation for this class was generated from the following file:

• itkMaskedImageRegistrationMethod.h