Base Class specifically for doing multiple stage registrations. More...

Inheritance diagram for itk::MultiStageImageRegistrationMethod< TInputImageType >:

Collaboration diagram for itk::MultiStageImageRegistrationMethod< TInputImageType >:

Public Types
typedef MultiStageImageRegistrationMethod	Self

typedef MaskedImageRegistrationMethod < TInputImageType >	Superclass

typedef SmartPointer< Self >	Pointer

typedef SmartPointer< const Self >	ConstPointer

typedef ImageToImageMetric < TInputImageType, TInputImageType >	MetricType

typedef MetricType::TransformParametersType	ParametersType

typedef MetricType::DerivativeType	DerivativeType

typedef itk::EulerAffineTransform < double, TInputImageType::ImageDimension, TInputImageType::ImageDimension >	TransformType

typedef TransformType *	TransformPointer

typedef UCLRegularStepOptimizer	OptimizerType

typedef OptimizerType *	OptimizerPointer

typedef OptimizerType::ScalesType	ScalesType

Public Types inherited from itk::MaskedImageRegistrationMethod< TInputImageType >
typedef MaskedImageRegistrationMethod	Self

typedef SingleResolutionImageRegistrationMethod < TInputImageType, TInputImageType >	Superclass

typedef SmartPointer< Self >	Pointer

typedef SmartPointer< const Self >	ConstPointer

typedef TInputImageType	InputImageType

typedef InputImageType::PixelType	InputImagePixelType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef InputImageType::RegionType	InputImageRegionType

typedef InputImageType::SizeType	InputImageSizeType

typedef InputImageType::IndexType	InputImageIndexType

typedef InputImageType::SpacingType	InputImageSpacingType

typedef InputImageType::PointType	InputImageOriginType

typedef InputImageType::DirectionType	InputImageDirectionType

typedef BoundaryValueRescaleIntensityImageFilter < InputImageType >	RescaleFilterType

typedef RescaleFilterType::Pointer	RescaleFilterPointer

typedef SmoothingRecursiveGaussianImageFilter < InputImageType, InputImageType >	SmoothingFilterType

typedef SmoothingFilterType::Pointer	SmoothingFilterPointer

typedef BinaryThresholdImageFilter < InputImageType, InputImageType >	ThresholdFilterType

typedef ThresholdFilterType::Pointer	ThresholdFilterPointer

typedef BinaryCrossStructuringElement < InputImagePixelType, InputImageType::ImageDimension >	StructuringType

typedef BinaryDilateImageFilter < InputImageType, InputImageType, StructuringType >	DilateMaskFilterType

typedef DilateMaskFilterType::Pointer	DilateMaskFilterPointer

typedef MultiplyImageFilter < InputImageType, InputImageType >	MultiplyFilterType

typedef MultiplyFilterType::Pointer	MultiplyFilterPointer

typedef unsigned char	MaskPixelType

typedef Image< MaskPixelType, InputImageType::ImageDimension >	MaskImageType

typedef CastImageFilter < InputImageType, MaskImageType >	CastToMaskImageTypeFilterType

typedef CastToMaskImageTypeFilterType::Pointer	CastToMaskImageTypeFilterPointer

typedef ImageMaskSpatialObject < InputImageType::ImageDimension >	MaskFilterType

typedef MaskFilterType::Pointer	MaskFilterPointer

typedef Superclass::TransformType	TransformType

Public Types inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
typedef SingleResolutionImageRegistrationMethod	Self

typedef ImageRegistrationMethod < TInputImageType, TInputImageType >	Superclass

typedef SmartPointer< Self >	Pointer

typedef SmartPointer< const Self >	ConstPointer

typedef itk::IterationUpdateCommand	IterationUpdateCommandType

typedef IterationUpdateCommandType::Pointer	IterationUpdateCommandPointer

typedef Superclass::ParametersType	ParametersType

typedef Superclass::TransformType	TransformType

typedef Superclass::InterpolatorType	InterpolatorType

Public Member Functions
virtual const char *	GetClassName () const

Public Member Functions inherited from itk::MaskedImageRegistrationMethod< TInputImageType >
void	SetFixedMask (const InputImageType *fixedMask)

virtual const InputImageType *	GetFixedMask ()

void	SetMovingMask (const InputImageType *movingMask)

virtual const InputImageType *	GetMovingMask ()

virtual void	SetUseFixedMask (bool _arg)

virtual bool	GetUseFixedMask () const

virtual void	SetUseMovingMask (bool _arg)

virtual bool	GetUseMovingMask () const

virtual void	SetNumberOfDilations (unsigned int _arg)

virtual unsigned int	GetNumberOfDilations ()

virtual void	SetMaskImageDirectly (bool _arg)

virtual bool	GetMaskImageDirectly ()

virtual void	SetRescaleFixedImage (bool _arg)

virtual bool	GetRescaleFixedImage () const

virtual void	SetRescaleFixedMinimum (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleFixedMinimum () const

virtual void	SetRescaleFixedMaximum (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleFixedMaximum () const

virtual void	SetRescaleFixedBoundaryValue (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleFixedBoundaryValue () const

virtual void	SetRescaleFixedLowerThreshold (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleFixedLowerThreshold () const

virtual void	SetRescaleFixedUpperThreshold (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleFixedUpperThreshold () const

virtual void	SetRescaleMovingImage (bool _arg)

virtual bool	GetRescaleMovingImage () const

virtual void	SetRescaleMovingMinimum (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleMovingMinimum () const

virtual void	SetRescaleMovingMaximum (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleMovingMaximum () const

virtual void	SetRescaleMovingBoundaryValue (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleMovingBoundaryValue () const

virtual void	SetRescaleMovingLowerThreshold (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleMovingLowerThreshold () const

virtual void	SetRescaleMovingUpperThreshold (InputImagePixelType _arg)

virtual InputImagePixelType	GetRescaleMovingUpperThreshold () const

virtual void	SetThresholdFixedMask (bool _arg)

virtual bool	GetThresholdFixedMask () const

virtual void	SetFixedMaskMinimum (InputImagePixelType _arg)

virtual InputImagePixelType	GetFixedMaskMinimum () const

virtual void	SetFixedMaskMaximum (InputImagePixelType _arg)

virtual InputImagePixelType	GetFixedMaskMaximum () const

virtual void	SetThresholdMovingMask (bool _arg)

virtual bool	GetThresholdMovingMask () const

virtual void	SetMovingMaskMinimum (InputImagePixelType _arg)

virtual InputImagePixelType	GetMovingMaskMinimum () const

virtual void	SetMovingMaskMaximum (InputImagePixelType _arg)

virtual InputImagePixelType	GetMovingMaskMaximum () const

virtual void	SetSigma (float _arg)

virtual float	GetSigma ()

InputImageType *	GetFixedImageCopy ()

InputImageType *	GetMovingImageCopy ()

Public Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
virtual void	SetIterationUpdateCommand (IterationUpdateCommandType *_arg)

virtual IterationUpdateCommandType *	GetIterationUpdateCommand ()

virtual void	SetFixedImageInterpolator (InterpolatorType *_arg)

virtual void	SetMovingImageInterpolator (InterpolatorType *_arg)

virtual InterpolatorType *	GetFixedImageInterpolator ()

virtual InterpolatorType *	GetMovingImageInterpolator ()

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::MaskedImageRegistrationMethod< TInputImageType >
static Pointer	New ()

Static Public Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
static Pointer	New ()

Protected Member Functions
	MultiStageImageRegistrationMethod ()

virtual	~MultiStageImageRegistrationMethod ()

void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	DoRegistration () throw (ExceptionObject)

virtual void	DoMultiStageRegistration (OptimizerPointer optimizer, TransformPointer transform) throw (ExceptionObject)

virtual void	SetLoopTolerance (double _arg)

virtual double	GetLoopTolerance ()

virtual void	SetMaxNumberOfLoops (unsigned int _arg)

virtual unsigned int	GetMaxNumberOfLoops ()

virtual void	SetLoopStepSizeReductionFactor (double _arg)

virtual double	GetLoopStepSizeReductionFactor ()

Protected Member Functions inherited from itk::MaskedImageRegistrationMethod< TInputImageType >
	MaskedImageRegistrationMethod ()

virtual	~MaskedImageRegistrationMethod ()

void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	Initialize () throw (ExceptionObject)

void	CopyImage (const InputImageType source, InputImageType target)

Protected Member Functions inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
	SingleResolutionImageRegistrationMethod ()

virtual	~SingleResolutionImageRegistrationMethod ()

void	PrintSelf (std::ostream &os, Indent indent) const

void	GenerateData ()

Additional Inherited Members
Protected Attributes inherited from itk::SingleResolutionImageRegistrationMethod< TInputImageType, TInputImageType >
InterpolatorType::Pointer	m_FixedImageInterpolator

InterpolatorType::Pointer	m_MovingImageInterpolator

Detailed Description

template<typename TInputImageType>
class itk::MultiStageImageRegistrationMethod< TInputImageType >

Base Class specifically for doing multiple stage registrations.

The aim is so that we can test registration methods that do things like:

1.) Optimize translations then rotations.

2.) Optimize translations then rotations then scales.

3.) Optimize rigid parameters (translations & rotations) then scales.

We have an initial step size. We loop round a combination such as translate, rotate, scale, calling StartOptimization for each. We keep looping until neither translation, rotation and scale have less change on cost function than the tolerance. We then reduce the step size and try again.